approximate-bayesian-computation | Topic

Topic: "approximate-bayesian-computation"

epistorm/epydemix

epydemix, the ABC of epidemics

Language: Jupyter Notebook - Size: 20.2 MB - Last synced at: 21 days ago - Pushed at: 27 days ago - Stars: 33 - Forks: 4

florent-leclercq/Bayes_InfoTheory

Lectures on Bayesian statistics and information theory

Language: Jupyter Notebook - Size: 47.4 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 31 - Forks: 4

dirmeier/sbijax

Simulation-based inference in JAX

Language: Python - Size: 25.4 MB - Last synced at: 24 days ago - Pushed at: 3 months ago - Stars: 31 - Forks: 4

francescoalemanno/KissABC.jl

Pure julia implementation of Multiple Affine Invariant Sampling for efficient Approximate Bayesian Computation

Language: Julia - Size: 2.98 MB - Last synced at: 20 days ago - Pushed at: about 2 years ago - Stars: 29 - Forks: 8

Plant-Food-Research-Open/calisim

A toolbox for the calibration and evaluation of simulation models.

Language: Python - Size: 6.87 MB - Last synced at: 13 days ago - Pushed at: 30 days ago - Stars: 14 - Forks: 2

neuralyzer/pyabc

pyABC: distributed, likelihood-free inference

Size: 25.8 MB - Last synced at: about 2 months ago - Pushed at: over 7 years ago - Stars: 13 - Forks: 3

Quetzal-framework/quetzal-CoaTL

A toolbox for C++ devs wanting to build geospatial population genetics simulators !

Language: C++ - Size: 51.3 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 12 - Forks: 1

mauricelanghinrichs/ABCdeZ.jl

Approximate Bayesian Computation (ABC) with differential evolution (de) moves and model evidence (Z) estimates.

Language: Julia - Size: 894 KB - Last synced at: 3 months ago - Pushed at: 4 months ago - Stars: 12 - Forks: 1

JBris/model-calibration-evaluation

Evaluating model calibration methods for sensitivity analysis, uncertainty analysis, optimisation, and Bayesian inference

Language: Python - Size: 4.18 MB - Last synced at: 21 days ago - Pushed at: 3 months ago - Stars: 11 - Forks: 1

compops/gpo-smc-abc

Bayesian optimisation for fast approximate inference in state-space models with intractable likelihoods

Language: Python - Size: 11.7 MB - Last synced at: about 2 years ago - Pushed at: over 7 years ago - Stars: 11 - Forks: 6

florent-leclercq/pyselfi

Simulator Expansion for Likelihood-Free Inference (SELFI): a python implementation

Language: Jupyter Notebook - Size: 44.7 MB - Last synced at: 16 days ago - Pushed at: over 2 years ago - Stars: 10 - Forks: 1

diyabc/abcranger

ABC random forests for model choice and parameter estimation, pure C++ implementation

Language: Jupyter Notebook - Size: 38.9 MB - Last synced at: 20 days ago - Pushed at: 9 months ago - Stars: 9 - Forks: 4

NisanurBulut/MatlabImageProcessing

Adding Noise Noise Canceling Image resizing Resolution Study Filtering processes -Midic filter -Mean filter -Laplasian filter Photo Sharpening

Language: MATLAB - Size: 20.5 KB - Last synced at: 2 months ago - Pushed at: over 4 years ago - Stars: 9 - Forks: 1

americocunhajr/CE-ABC

CE-ABC is a code to simulate the epidemic outbreaks with mechanistic models through a cross-entropy approximate Bayesian framework.

Language: MATLAB - Size: 68.1 MB - Last synced at: 10 days ago - Pushed at: 3 months ago - Stars: 7 - Forks: 1

ocramz/bayesian-inference

Language: Haskell - Size: 113 KB - Last synced at: 2 months ago - Pushed at: over 5 years ago - Stars: 7 - Forks: 1

JuliaApproxInference/LikelihoodfreeInference.jl

Likelihood-Free Inference for Julia.

Language: Julia - Size: 11.2 MB - Last synced at: over 2 years ago - Pushed at: over 3 years ago - Stars: 5 - Forks: 0

szrlee/HyperAgent

The official code repo for HyperAgent algorithm published in ICML 2024.

Language: Python - Size: 1.07 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 4 - Forks: 0

florent-leclercq/correlations_vs_field

Correlation functions versus field-level inference in cosmology: example with log-normal fields

Language: Jupyter Notebook - Size: 130 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 4 - Forks: 0

diyabc/diyabcGUI

User interface to DIYABC/AbcRanger

Language: R - Size: 62.9 MB - Last synced at: over 2 years ago - Pushed at: over 3 years ago - Stars: 4 - Forks: 2

florent-leclercq/lotkavolterra_simulator

Simulator of the Lotka-Volterra prey-predator system with demographic and observational noise and biases

Language: Jupyter Notebook - Size: 1.37 MB - Last synced at: 24 days ago - Pushed at: 3 months ago - Stars: 3 - Forks: 0

JBris/deep-root-gen

A simulation model for the digital reconstruction of 3D root system architectures. Integrated with a simulation-based inference generative deep learning model.

Language: Python - Size: 4.71 MB - Last synced at: 3 months ago - Pushed at: 7 months ago - Stars: 3 - Forks: 1

QuanticPony/Analysis-of-effectiveness-of-lockdown-policies-for-desease-containment

Trabajo de Fin de Grado de Física 2022

Language: Python - Size: 15.4 MB - Last synced at: over 2 years ago - Pushed at: almost 3 years ago - Stars: 3 - Forks: 0

Eawag-SIAM/SimulatedAnnealingABC.jl

Approximate Bayesian Computation algorithm based on simulated annealing

Language: Julia - Size: 3.52 MB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 2 - Forks: 0

ngozzi/epydemix

epydemix, the ABC of epidemics

Language: Jupyter Notebook - Size: 211 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 2 - Forks: 0

SourabhKul/ABC-COVID-19-GPU-TPU

GPU and TPU implementation of parallelized ABC inference for a stochastic epidemiology model for COVID-19

Language: Jupyter Notebook - Size: 26.4 KB - Last synced at: 12 months ago - Pushed at: over 4 years ago - Stars: 2 - Forks: 0

ocbe-uio/elfi Fork of elfi-dev/elfi

A Python package for likelihood-free inference (LFI) methods such as Approximate Bayesian Computation (ABC)

Language: Python - Size: 1.27 MB - Last synced at: 10 months ago - Pushed at: over 4 years ago - Stars: 2 - Forks: 0

alex-schaaf/abc-geomodeling

Figuring out how Approximate Bayesian Computation works and how it can be applied to geological modeling.

Language: Jupyter Notebook - Size: 352 KB - Last synced at: over 2 years ago - Pushed at: about 7 years ago - Stars: 2 - Forks: 0

SamuelWiqvist/ApproximateBayesianComputation.jl

Julia implementation of some ABC algorithms.

Language: Julia - Size: 1.33 MB - Last synced at: almost 2 years ago - Pushed at: about 7 years ago - Stars: 2 - Forks: 0

JBris/likelihood_free_hyperpriors_test

Testing out hyper-priors for likelihood-free methods

Language: Jupyter Notebook - Size: 354 KB - Last synced at: 13 days ago - Pushed at: 2 months ago - Stars: 1 - Forks: 0

akpanitorobong/7089CEM-Statistical_Methods_For_Data_Science

CW Code and Dataset for SMDS module at Coventry University. Applied Nonlinear Regression and Bayesian Inference techniques to analyze MEG brain responses from a simulated neuromarketing experiment. The project demonstrates proficiency in modeling complex biological signals and estimating parameter uncertainty using Approximate Bayesian Computation

Language: Jupyter Notebook - Size: 2.14 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 1 - Forks: 0