bayesian-data-analysis | Topic | Ecosyste.ms: Repos

Topic: "bayesian-data-analysis"

stan-dev/stan

Stan development repository. The master branch contains the current release. The develop branch contains the latest stable development. See the Developer Process Wiki for details.

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avehtari/BDA_course_Aalto

Bayesian Data Analysis course at Aalto

Language: TeX - Size: 440 MB - Last synced at: 10 days ago - Pushed at: 5 months ago - Stars: 2,205 - Forks: 562

stan-dev/rstan

RStan, the R interface to Stan

Language: R - Size: 197 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 1,063 - Forks: 270

avehtari/BDA_py_demos

Bayesian Data Analysis demos for Python

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aloctavodia/Statistical-Rethinking-with-Python-and-PyMC3

Python/PyMC3 port of the examples in " Statistical Rethinking A Bayesian Course with Examples in R and Stan" by Richard McElreath

Language: Jupyter Notebook - Size: 52.4 MB - Last synced at: about 1 month ago - Pushed at: about 5 years ago - Stars: 852 - Forks: 256

mjskay/tidybayes

Bayesian analysis + tidy data + geoms (R package)

Language: R - Size: 236 MB - Last synced at: about 1 month ago - Pushed at: 10 months ago - Stars: 739 - Forks: 63

JWarmenhoven/DBDA-python

Doing Bayesian Data Analysis, 2nd Edition (Kruschke, 2015): Python/PyMC3 code

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ericmjl/bayesian-stats-modelling-tutorial

How to do Bayesian statistical modelling using numpy and PyMC3

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avehtari/BDA_R_demos

Bayesian Data Analysis demos for R

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ericmjl/bayesian-analysis-recipes

A collection of Bayesian data analysis recipes using PyMC3

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stan-dev/rstanarm

rstanarm R package for Bayesian applied regression modeling

Language: R - Size: 117 MB - Last synced at: 3 days ago - Pushed at: about 1 month ago - Stars: 396 - Forks: 136

uncomplicate/bayadera

High-performance Bayesian Data Analysis on the GPU in Clojure

Language: Clojure - Size: 1020 KB - Last synced at: about 1 month ago - Pushed at: almost 5 years ago - Stars: 365 - Forks: 23

stan-dev/shinystan

shinystan R package and ShinyStan GUI

Language: R - Size: 32.9 MB - Last synced at: 8 days ago - Pushed at: 5 months ago - Stars: 199 - Forks: 47

fehiepsi/rethinking-pyro

Statistical Rethinking with PyTorch and Pyro

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stan-dev/loo

loo R package for approximate leave-one-out cross-validation (LOO-CV) and Pareto smoothed importance sampling (PSIS)

Language: R - Size: 115 MB - Last synced at: about 22 hours ago - Pushed at: about 23 hours ago - Stars: 154 - Forks: 36

arviz-devs/preliz

Exploring and eliciting probability distributions

Language: Python - Size: 43.3 MB - Last synced at: 9 days ago - Pushed at: 12 days ago - Stars: 139 - Forks: 12

xfim/ggmcmc

Graphical tools for analyzing Markov Chain Monte Carlo simulations from Bayesian inference

Language: R - Size: 2.31 MB - Last synced at: about 3 hours ago - Pushed at: about 2 years ago - Stars: 112 - Forks: 32

AlexIoannides/pymc-example-project

Example PyMC3 project for performing Bayesian data analysis using a probabilistic programming approach to machine learning.

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vasishth/bayescogsci

Introduction to Bayesian Data Analysis for Cognitive Science by Nicenboim, Schad, Vasishth

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m-clark/bayesian-basics

:no_entry_sign: :leftwards_arrow_with_hook: A document that introduces Bayesian data analysis.

Language: Stan - Size: 93 MB - Last synced at: 12 days ago - Pushed at: over 3 years ago - Stars: 85 - Forks: 26

Montanaz0r/Bayesian-Statistics-The-Fun-Way

Solutions and workflow for the Bayesian Statistics The Fun Way book in Python

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ericmjl/bayesian-stats-talk

Doing Bayesian statistics in Python!

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jgabry/bayes-vis-paper

'Visualization in Bayesian workflow' by Gabry, Simpson, Vehtari, Betancourt, and Gelman. (JRSS discussion paper and code)

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avehtari/BDA_m_demos

Bayesian Data Analysis demos for Matlab/Octave

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n-kall/priorsense

priorsense: an R package for prior diagnostics and sensitivity

Language: R - Size: 9.83 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 60 - Forks: 9

stan-ja/stan-ja

Stanマニュアルの日本語への翻訳プロジェクト

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jffist/statistical-rethinking-solutions

Solutions of practice problems from the Richard McElreath's "Statistical Rethinking" book.

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stan-dev/rstantools

Tools for Developing R Packages Interfacing with Stan

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Bayesian Cost Effectiveness Analysis. Given the results of a Bayesian model (possibly based on MCMC) in the form of simulations from the posterior distributions of suitable variables of costs and clinical benefits for two or more interventions, produces a health economic evaluation. Compares one of the interventions (the "reference") to the others ("comparators"). Produces many summary and plots to analyse the results

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bikestra/bdapy

Reproducing plots of Bayesian Data Analysis (Gelman et al, 3rd Edition) in Python

Language: Python - Size: 1.07 MB - Last synced at: almost 2 years ago - Pushed at: over 10 years ago - Stars: 46 - Forks: 8

mvuorre/bmlm

Bayesian multilevel mediation models in R

Language: TeX - Size: 136 MB - Last synced at: about 16 hours ago - Pushed at: 7 months ago - Stars: 45 - Forks: 11

tpapp/LogDensityProblems.jl

A common framework for implementing and using log densities for inference.

Language: Julia - Size: 1.18 MB - Last synced at: about 21 hours ago - Pushed at: about 2 months ago - Stars: 41 - Forks: 9

tpapp/DynamicHMCExamples.jl

Examples for Bayesian inference using DynamicHMC.jl and related packages.

Language: Jupyter Notebook - Size: 653 KB - Last synced at: about 21 hours ago - Pushed at: 3 months ago - Stars: 37 - Forks: 3

SebastianBocquet/pygtc

Make a sweet giant triangle confusogram (GTC) plot

Language: Jupyter Notebook - Size: 26.1 MB - Last synced at: 3 days ago - Pushed at: over 1 year ago - Stars: 33 - Forks: 9

avehtari/rhat_ess

Rank-normalization, folding, and localization: An improved R-hat for assessing convergence of MCMC

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C-bowman/inference-tools

Python tools for Bayesian data analysis

Language: Python - Size: 13.7 MB - Last synced at: 4 days ago - Pushed at: about 1 month ago - Stars: 29 - Forks: 4

francescoalemanno/KissABC.jl

Pure julia implementation of Multiple Affine Invariant Sampling for efficient Approximate Bayesian Computation

Language: Julia - Size: 2.98 MB - Last synced at: 19 days ago - Pushed at: about 2 years ago - Stars: 29 - Forks: 8

adobe/Chronikis

A compiler for Bayesian time series models.

Language: Haskell - Size: 9.44 MB - Last synced at: about 1 year ago - Pushed at: over 5 years ago - Stars: 22 - Forks: 5

MauroCE/PythonBRMLtoolbox

Python 3.7 version of David Barber's MATLAB BRMLtoolbox

Language: Python - Size: 690 KB - Last synced at: over 2 years ago - Pushed at: almost 7 years ago - Stars: 22 - Forks: 3

UWNETLAB/dcss_supplementary

Supplementary materials for McLevey 2021 Doing Computational Social Science (Sage, UK).

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madsjulia/BIGUQ.jl

Bayesian Information Gap Decision Theory

Language: Julia - Size: 99.6 KB - Last synced at: 11 days ago - Pushed at: over 1 year ago - Stars: 18 - Forks: 4

aadya940/chainopy

ChainoPy: A Python Library for Discrete Time Markov Chain based stochastic analysis

Language: Jupyter Notebook - Size: 1.11 MB - Last synced at: 5 days ago - Pushed at: 11 months ago - Stars: 17 - Forks: 1

wiedenhoeft/HaMMLET

Fast Bayesian Hidden Markov Model with Wavelet Compression

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stappit/bayesian-data-analysis

Berlin Bayesians' solutions to Bayesian Data Analysis, 3rd edition.

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bnicenboim/bcogsci

Datasets and models included in the book "An Introduction to Bayesian Data Analysis for Cognitive Science".

Language: R - Size: 40.7 MB - Last synced at: about 16 hours ago - Pushed at: 2 months ago - Stars: 16 - Forks: 6

mikeroyal/Bayesian-Statistics-Guide

Bayesian Statistics Guide

Language: MATLAB - Size: 180 KB - Last synced at: about 2 months ago - Pushed at: over 3 years ago - Stars: 15 - Forks: 4

AlexIoannides/pymc-advi-hmc-demo

Demonstrating HMC and ADVI algorithms for Bayesian data analysis using PYMC3.

Language: Jupyter Notebook - Size: 397 KB - Last synced at: 3 months ago - Pushed at: over 6 years ago - Stars: 14 - Forks: 4

jhrcook/bayesian-data-analysis-course

My notes and work for the Bayesian Data Analysis course taught by Aki Vehtari.

Language: R - Size: 338 MB - Last synced at: 3 months ago - Pushed at: over 2 years ago - Stars: 13 - Forks: 7

maxfarrell/qcbs_stan_workshop

Introduction to Stan, rstan & rstanarm

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fweber144/shinybrms

An R package providing a GUI ('shiny' app) for the R package 'brms'.

Language: R - Size: 28.9 MB - Last synced at: 24 days ago - Pushed at: 6 months ago - Stars: 10 - Forks: 1

petrushev/bayesian-modeling

Case studies with Bayesian methods

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florent-leclercq/pyselfi

Simulator Expansion for Likelihood-Free Inference (SELFI): a python implementation

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oeysan/bfw

Framework for conducting Bayesian analyses

Language: R - Size: 724 KB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 10 - Forks: 1

huffyhenry/shot-generation

Bayesian modelling of shot generation and conversion in soccer

Language: Stan - Size: 5.85 MB - Last synced at: 2 days ago - Pushed at: over 6 years ago - Stars: 10 - Forks: 0

belg92/HMSC

Hierarchical Model of Species Communities (HMSC) is an R package, which provides extensive set of analytical tools devised for numerical analysis of data on ecological communities or other similarly structured data. The methodological core of the HMSC approach is centered on combination of hierarchical regression and latent factor models.

Language: R - Size: 260 KB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 9 - Forks: 4

topipa/iwmm

iwmm: an R package for adaptive importance sampling

Language: R - Size: 505 KB - Last synced at: about 2 months ago - Pushed at: 10 months ago - Stars: 8 - Forks: 2

Nagasaki45/dbdapy

Following "Doing Bayesian Data Analysis", in python

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beekill95/numpyro-doing-bayesian

My implementation of John K. Kruschke's Doing Bayesian Data Analysis 2nd edition using Python and Numpyro.

Language: Python - Size: 190 MB - Last synced at: 27 days ago - Pushed at: about 1 year ago - Stars: 7 - Forks: 1

huffyhenry/dixon-coles-worldcup

Undermining the integrity of an office prediction contest

Language: Python - Size: 932 KB - Last synced at: 2 days ago - Pushed at: about 6 years ago - Stars: 7 - Forks: 0

mdscheuerell/steelhead_IPM

Code & data necessary to reproduce the analyses described in Scheuerell et al.

Language: R - Size: 117 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 6 - Forks: 3

bearloga/BCDA

This R package is a set of tools for Bayesian analysis of categorical data, specifically 2×2 contingency tables.

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stappit/blog

I often post solutions to textbook exercises, including: Bayesian Data Analysis (BDA) by Gelman et al; Causal Inference in Statistics Primer (CISP) by Pearl et al; Purely Functional Data Structures (PFDS) by Okasaki.

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florent-leclercq/borg_sdss_data_release

Public release of data products following the BORG SDSS analysis

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JamesTrick/bayesian_data_analysis_pyro

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ebuhle/LCRchumIPM

This is the development site for an Integrated Population Model for chum salmon in the lower Columbia River.

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JulianFrattini/bda4sci

Material for the Introduction Seminar to Bayesian Data Analysis for Statistical Causal Inference

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mcdonohue/rstanarm Fork of stan-dev/rstanarm

rstanarm R package for Bayesian applied regression modeling

Language: R - Size: 76 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 4 - Forks: 2

florent-leclercq/correlations_vs_field

Correlation functions versus field-level inference in cosmology: example with log-normal fields

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jhrcook/bayesian-analysis-with-python_e2

My notes on "Bayesian Analysis with Python" (edition 2) by Osvaldo Martin.

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iankurgarg/adbi-projects

Projects from the Course on "Algorithms for Data guided Business Intelligence"

Language: Python - Size: 22.5 MB - Last synced at: about 1 year ago - Pushed at: about 7 years ago - Stars: 4 - Forks: 12

fvlankvelt/emmy

Embedded Scala probabilistic programming language

Language: Scala - Size: 240 KB - Last synced at: 8 days ago - Pushed at: over 7 years ago - Stars: 4 - Forks: 1

nshen7/decemedip

An R package for deconvoluting cell types in bulk-tissue/cell-free MeDIP-seq data leveraging a Bayesian hierarchical model. Depends on RStan.

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phineas-pta/Bayesian-Methods-for-Hackers-using-PyStan 📦

"Probabilistic Programming & Bayesian Methods for Hackers" book ported to Stan (python)

Language: Python - Size: 19.4 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 3 - Forks: 0

englianhu/bolexiangma

易经道家：算卜、占卜、秦人牧马、田忌赛马、伯乐相马（世袭制易经道家学术份子联富我喜欢龙珠中的女科学家布玛/庄子。嫁鸡随鸡，嫁狗随狗）、分析彩券。

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explcre/21FallVE414Project-Gaussian-Mixture-Model

Position prediction of invisible tree using EM algorithm of GMM. We used Python's Matplotlib data visualization and preprocessed to determine the fruit distribution. BIC and AIC indexes were used to determine the number of cluster categories, and Gaussian mixture model was used to cluster according to the fruit data to predict the coordinates of the number. We use poission distribution to predict the distribution of the whole forest.

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giabaio/EVSI Fork of annaheath/EVSI

A suite of functions for the calculation and presentation of the Expected Value of Sample Information.

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avisionh/predictgraduateprospects

Applies Bayesian techniques for analysing various factors that can influence a UK university's graduate prospects rating from the HESA SFR247 and Complete University Guide table.

Language: R - Size: 17.9 MB - Last synced at: 26 days ago - Pushed at: over 4 years ago - Stars: 3 - Forks: 1

bgautijonsson/isa_trans_covid19

This github repo is a companion to the article A hierarchical Bayesian implementation of a novel inverted generalized logistic growth curve for predicting diagnosed COVID-19 cases in 68 countries.

Language: R - Size: 70.7 MB - Last synced at: over 2 years ago - Pushed at: almost 5 years ago - Stars: 3 - Forks: 0

Dimanaux/naive-bayes-python

classifier of programming languages

Language: Python - Size: 199 KB - Last synced at: over 2 years ago - Pushed at: about 6 years ago - Stars: 3 - Forks: 0

ethanhezhao/NARM

The code for the paper "Leveraging Node Attributes for Incomplete Relational Data" in ICML 2017

Language: Matlab - Size: 292 KB - Last synced at: over 1 year ago - Pushed at: almost 8 years ago - Stars: 3 - Forks: 2

mdscheuerell/AukeCoho

Development site for an integrated population model for Auke Creek coho salmon

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BWTSE/Analysis

This repository contains a replication package used to investigate the Broken Windows Theory of Software Engineering.

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shadowboxingskills/ppchain

Your Probabilistic Modeling Copilot

Language: Python - Size: 208 KB - Last synced at: about 1 month ago - Pushed at: almost 2 years ago - Stars: 2 - Forks: 1

totucuong/bayes_data_analysis

A collection of notebooks that demonstrate Bayesian data analysis

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jvines/BayesianGLS

An implementation of the Bayesian Generalized Lomb Scargle periodogram as described by Mortier et al. 2015

Language: Python - Size: 111 KB - Last synced at: over 2 years ago - Pushed at: over 5 years ago - Stars: 2 - Forks: 0

mdscheuerell/gretaDFA

Using the greta package for R to fit Dynamic Factor Models

Language: R - Size: 99.4 MB - Last synced at: almost 2 years ago - Pushed at: over 6 years ago - Stars: 2 - Forks: 1

jordandeklerk/pyloo

Python package for approximate leave-one-out cross-validation (LOO-CV) and Pareto smoothed importance sampling (PSIS) for Bayesian Modeling

Language: Python - Size: 4.44 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 1 - Forks: 1

sempwn/bennu

Bayesian Estimation of Naloxone Numbers Underreporting

Language: R - Size: 25.2 MB - Last synced at: 26 days ago - Pushed at: 9 months ago - Stars: 1 - Forks: 0

simonsteiger/atoll-seabirds

Code and data accompanying the article "Atolls are globally important sites for tropical seabirds".

Language: R - Size: 157 MB - Last synced at: 2 days ago - Pushed at: 10 months ago - Stars: 1 - Forks: 0

JelinR/Fake_News_Detection

Built an efficient text classifier in R for fake news detection, training on 20,800 rows (average 4,544 words) in under 30 seconds.

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MooersLab/bayesian-data-analysis-voice-in

Size: 82 KB - Last synced at: 26 days ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0

MooersLab/jointprob1D

Notes for the jointprob group

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shadowboxingskills/ppchainR

Your Probabilistic Modeling Copilot

Language: R - Size: 33.2 KB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 1 - Forks: 0

jhrcook/NeuroBio-316QC

NeuroBio 316QC: Probabilistic models for neural data: from single neurons to population dynamics

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nihitparikh/Predictive-Analysis-for-Stated-Consumer-Preference-Data-for-Monitor-Industry

This repository includes my marketing/data analytics project on monitor dataset that includes Maximum Likelihood Model, Market Simulation, Cluster Analysis, Market Basket Analysis, Association Rule Mining, Hierarchical Bayesian Regression Model, R script code.

Language: R - Size: 9.29 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0