An open API service providing repository metadata for many open source software ecosystems.

Topic: "parameter-estimation"

casadi/casadi

CasADi is a symbolic framework for numeric optimization implementing automatic differentiation in forward and reverse modes on sparse matrix-valued computational graphs. It supports self-contained C-code generation and interfaces state-of-the-art codes such as SUNDIALS, IPOPT etc. It can be used from C++, Python or Matlab/Octave.

Language: C++ - Size: 143 MB - Last synced at: 5 days ago - Pushed at: 6 days ago - Stars: 1,993 - Forks: 418

sbi-dev/sbi

sbi is a Python package for simulation-based inference, designed to meet the needs of both researchers and practitioners. Whether you need fine-grained control or an easy-to-use interface, sbi has you covered.

Language: Python - Size: 113 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 721 - Forks: 196

ICB-DCM/pyPESTO

python Parameter EStimation TOolbox

Language: Python - Size: 45.5 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 256 - Forks: 47

pints-team/pints

Probabilistic Inference on Noisy Time Series

Language: Python - Size: 192 MB - Last synced at: 8 days ago - Pushed at: 7 months ago - Stars: 239 - Forks: 34

undark-lab/swyft

A system for scientific simulation-based inference at scale.

Language: Jupyter Notebook - Size: 380 MB - Last synced at: 5 days ago - Pushed at: over 1 year ago - Stars: 164 - Forks: 16

usgs/pestpp

tools for scalable and non-intrusive parameter estimation, uncertainty analysis and sensitivity analysis

Language: C++ - Size: 1.12 GB - Last synced at: about 5 hours ago - Pushed at: 6 days ago - Stars: 156 - Forks: 86

baggepinnen/ControlSystemIdentification.jl

System Identification toolbox, compatible with ControlSystems.jl

Language: Julia - Size: 378 MB - Last synced at: 31 minutes ago - Pushed at: 2 months ago - Stars: 149 - Forks: 17

openmole/openmole

Workflow engine for exploration of simulation models using high throughput computing

Language: Scala - Size: 151 MB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 147 - Forks: 39

baggepinnen/LowLevelParticleFilters.jl

State estimation, smoothing and parameter estimation using Kalman and particle filters.

Language: Julia - Size: 382 MB - Last synced at: 10 days ago - Pushed at: 10 days ago - Stars: 135 - Forks: 18

AMICI-dev/AMICI

High-performance sensitivity analysis for large ordinary differential equation models

Language: C++ - Size: 211 MB - Last synced at: 4 days ago - Pushed at: 6 days ago - Stars: 125 - Forks: 31

SciML/StructuralIdentifiability.jl

Fast and automatic structural identifiability software for ODE systems

Language: Julia - Size: 32.7 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 124 - Forks: 20

weijie-chen/Basic-Statistics-With-Python

Introduction to statistics featuring Python. This series of lecture notes aim to walk you through all basic concepts of statistics, such as descriptive statistics, parameter estimations, hypothesis testing, ANOVA and etc. All codes are straightforward to understand.

Language: Jupyter Notebook - Size: 8.1 MB - Last synced at: 25 days ago - Pushed at: about 1 year ago - Stars: 122 - Forks: 47

SciML/QuasiMonteCarlo.jl

Lightweight and easy generation of quasi-Monte Carlo sequences with a ton of different methods on one API for easy parameter exploration in scientific machine learning (SciML)

Language: Julia - Size: 3.43 MB - Last synced at: about 22 hours ago - Pushed at: about 23 hours ago - Stars: 116 - Forks: 26

csu-hmc/opty

A library for using direct collocation in the optimization of dynamic systems.

Language: Python - Size: 2.13 MB - Last synced at: 4 days ago - Pushed at: about 2 months ago - Stars: 114 - Forks: 23

madsjulia/Mads.jl

MADS: Model Analysis & Decision Support

Language: HTML - Size: 184 MB - Last synced at: 18 days ago - Pushed at: about 2 months ago - Stars: 105 - Forks: 21

kjyv/FloBaRoID

Framework for dynamical system identification of floating-base rigid body tree structures

Language: Python - Size: 49.5 MB - Last synced at: 5 months ago - Pushed at: over 6 years ago - Stars: 63 - Forks: 26

SciML/DiffEqParamEstim.jl

Easy scientific machine learning (SciML) parameter estimation with pre-built loss functions

Language: Julia - Size: 3.79 MB - Last synced at: 4 days ago - Pushed at: 7 days ago - Stars: 60 - Forks: 34

PEtab-dev/PEtab

PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology

Size: 11.5 MB - Last synced at: 4 days ago - Pushed at: 14 days ago - Stars: 60 - Forks: 12

Data2Dynamics/d2d

a modeling environment tailored to parameter estimation in dynamical systems

Language: MATLAB - Size: 267 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 59 - Forks: 29

sdu-cfei/modest-py

FMI-compliant Model Estimation in Python

Language: Python - Size: 9.05 MB - Last synced at: 2 months ago - Pushed at: about 3 years ago - Stars: 52 - Forks: 13

pmocz/mcmc-python

Create Your Own Metropolis-Hastings Markov Chain Monte Carlo Algorithm for Bayesian Inference (With Python)

Language: Python - Size: 235 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 43 - Forks: 7

xpsi-group/xpsi

X-PSI: X-ray Pulse Simulation and Inference

Language: Python - Size: 514 MB - Last synced at: 5 days ago - Pushed at: 20 days ago - Stars: 41 - Forks: 21

GeoStat-Framework/welltestpy

A python-package for handling well based field campaigns.

Language: Python - Size: 10.2 MB - Last synced at: 20 days ago - Pushed at: about 1 year ago - Stars: 36 - Forks: 6

biomass-dev/biomass

A Python Framework for Modeling and Analysis of Signaling Systems

Language: Python - Size: 26 MB - Last synced at: 7 days ago - Pushed at: 3 months ago - Stars: 30 - Forks: 13

Benchmarking-Initiative/Benchmark-Models-PEtab

A collection of mathematical models with experimental data in the PEtab format as benchmark problems in order to evaluate new and existing methodologies for data-based modelling

Language: Python - Size: 3.53 MB - Last synced at: 10 days ago - Pushed at: 10 days ago - Stars: 29 - Forks: 18

SticsRPacks/CroptimizR

Estimate Crop Models' parameters

Language: R - Size: 28.1 MB - Last synced at: 3 days ago - Pushed at: 5 days ago - Stars: 28 - Forks: 6

iliailmer/ParameterEstimation.jl

ParameterEstimation.jl is a Julia package for estimating parameters and initial conditions of ODE models given measurement data.

Language: MATLAB - Size: 14.1 MB - Last synced at: 7 days ago - Pushed at: about 2 months ago - Stars: 28 - Forks: 8

msainsburydale/NeuralEstimators.jl

Julia package for neural estimation

Language: Julia - Size: 8.25 MB - Last synced at: 9 days ago - Pushed at: about 1 month ago - Stars: 26 - Forks: 2

ma921/SOBER

Fast Bayesian optimization, quadrature, inference over arbitrary domain with GPU parallel acceleration

Language: Jupyter Notebook - Size: 33.4 MB - Last synced at: 3 months ago - Pushed at: 4 months ago - Stars: 26 - Forks: 1

ICB-DCM/PESTO

PESTO: Parameter EStimation TOolbox, Bioinformatics, btx676, 2017.

Language: MATLAB - Size: 248 MB - Last synced at: about 1 month ago - Pushed at: over 5 years ago - Stars: 26 - Forks: 12

NYU-DiffusionMRI/SMI

Toolbox for parameter estimation of the Standard Model of diffusion in white matter

Language: MATLAB - Size: 1.08 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 25 - Forks: 0

GarrettJenkinson/informME

An information-theoretic pipeline for methylation analysis of WGBS data

Language: MATLAB - Size: 7.78 MB - Last synced at: almost 2 years ago - Pushed at: over 6 years ago - Stars: 24 - Forks: 9

ICB-DCM/parPE

Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.

Language: C++ - Size: 56.5 MB - Last synced at: 4 days ago - Pushed at: 7 months ago - Stars: 23 - Forks: 4

CliMA/ParameterEstimocean.jl

🎲 Parameter estimation for Oceananigans using EnsembleKalmanProcesses

Language: Julia - Size: 114 MB - Last synced at: 8 months ago - Pushed at: 9 months ago - Stars: 21 - Forks: 6

asanet/chemeng-solved

Classic problems in chemical engineering solved with matlab

Language: MATLAB - Size: 45.9 KB - Last synced at: 7 months ago - Pushed at: almost 6 years ago - Stars: 21 - Forks: 2

uob-positron-imaging-centre/ACCES-CoExSiST

Learning simulation parameters from experimental data, from the micro to the macro, from laptops to clusters.

Language: Python - Size: 17.8 MB - Last synced at: 4 days ago - Pushed at: almost 2 years ago - Stars: 19 - Forks: 4

DanielVandH/ProfileLikelihood.jl

Methods for profile likelihood analysis.

Language: Julia - Size: 18.9 MB - Last synced at: about 1 hour ago - Pushed at: 10 months ago - Stars: 18 - Forks: 3

elcorto/psweep

Loop like a pro, make parameter studies fun.

Language: Python - Size: 6.92 MB - Last synced at: 6 days ago - Pushed at: 26 days ago - Stars: 17 - Forks: 2

susantoj/Moto

Induction motor parameter estimation tool

Language: Python - Size: 1.32 MB - Last synced at: over 1 year ago - Pushed at: almost 8 years ago - Stars: 17 - Forks: 9

AleksandarHaber/Disciplined-Python-Implementation-of-the-Recursive-Least-Squares-Method

This is a disciplined Python implementation of the Recursive Least Squares Method

Language: Python - Size: 673 KB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 16 - Forks: 0

MichaelBarclift/Additive-Manufacturing

A curated list of Additive Manufacturing literature, research papers, and presentations that are publicly available and related to Laser Powder Bed Fusion and Metal Binder Jetting processes.

Size: 268 KB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 15 - Forks: 0

PEtab-dev/libpetab-python

Python package for working with PEtab files

Language: Python - Size: 11.1 MB - Last synced at: 14 days ago - Pushed at: 14 days ago - Stars: 14 - Forks: 7

AdityaSavara/PEUQSE

Parameter estimation for complex physical problems often suffers from finding ‘solutions’ that are not physically realistic. The PEUQSE software provides tools for finding physically realistic parameter estimates, graphs of the parameter estimate positions within parameter space, and plots of the final simulation results.

Language: Python - Size: 720 MB - Last synced at: 14 days ago - Pushed at: 3 months ago - Stars: 14 - Forks: 5

gwastro/gwin 📦

A python package for Bayesian inference of gravitational-wave data

Language: Python - Size: 677 KB - Last synced at: over 1 year ago - Pushed at: almost 7 years ago - Stars: 14 - Forks: 26

mauricelanghinrichs/ABCdeZ.jl

Approximate Bayesian Computation (ABC) with differential evolution (de) moves and model evidence (Z) estimates.

Language: Julia - Size: 894 KB - Last synced at: about 2 months ago - Pushed at: 6 months ago - Stars: 13 - Forks: 1

joelnmdyer/sbi4abm

Black-box Bayesian inference for agent-based models in the social sciences

Language: Python - Size: 561 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 13 - Forks: 7

CiaranWelsh/pycotools3

A Python toolbox for COPASI

Language: Python - Size: 768 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 13 - Forks: 3

fededc88/Li-Ion-Battery-Model-parameters-estimator

Semi-Automatic Li Ion battery RC model parameters estimator

Language: MATLAB - Size: 104 KB - Last synced at: over 2 years ago - Pushed at: over 3 years ago - Stars: 13 - Forks: 1

WilliamYi96/Variational-Inference

Generative Models

Size: 63.1 MB - Last synced at: over 2 years ago - Pushed at: over 7 years ago - Stars: 13 - Forks: 2

PEREGRINE-GW/peregrine

A simulation-based Inference (SBI) library designed to perform analysis on a wide class of gravitational wave signals

Language: Python - Size: 1.94 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 12 - Forks: 5

blakeaw/GAlibrate

Parameter estimation and model calibration using Genetic Algorithm optimization in Python.

Language: Jupyter Notebook - Size: 396 KB - Last synced at: 4 days ago - Pushed at: about 1 year ago - Stars: 12 - Forks: 4

DavAug/chi

Chi is an open source Python package which is designed for PKPD modelling and model-informed precision dosing (MIPD).

Language: Python - Size: 1.06 GB - Last synced at: 4 days ago - Pushed at: about 1 year ago - Stars: 10 - Forks: 5

okadalabipr/intro_to_param_estim 📦

Parameter estimation of ODE models describing biological processes

Language: Python - Size: 34.2 MB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 10 - Forks: 1

PySATL/pysatl-mpest

PySATL module providing tools for working with mixtures of distributions. In particular, it allows you to evaluate their parameters.

Language: Python - Size: 46.2 MB - Last synced at: 19 days ago - Pushed at: 26 days ago - Stars: 8 - Forks: 7

JuliaAPlavin/AccessibleOptimization.jl

User-friendly optimization interface with automatic fitting and statistics integration.

Language: Julia - Size: 684 KB - Last synced at: 12 days ago - Pushed at: 6 months ago - Stars: 8 - Forks: 0

LIMUNIMI/SAMPLE

Implementation of SAMPLE (Spectral Analysis for Modal Parameter Linear Estimate)

Language: Python - Size: 3.21 MB - Last synced at: 4 days ago - Pushed at: almost 2 years ago - Stars: 8 - Forks: 0

jonathan-obredor/PMSM-Controller-Simulink

Implementation of a Permanent Magnet Synchronous Motor Control: Field-Oriented Control with Simulink

Language: MATLAB - Size: 4.04 MB - Last synced at: almost 2 years ago - Pushed at: about 3 years ago - Stars: 8 - Forks: 4

vsquicciarini/madys

MADYS: isochronal parameter determination for young stellar and substellar objects

Language: Python - Size: 32.2 MB - Last synced at: 4 days ago - Pushed at: 5 months ago - Stars: 7 - Forks: 0

PEtab-dev/petabvis

PEtab visualization tool

Language: Python - Size: 184 KB - Last synced at: 4 days ago - Pushed at: almost 4 years ago - Stars: 7 - Forks: 0

OpenModelica/OMSysIdent

OpenModelica parameter estimation on top of OMSimulator

Language: C++ - Size: 7.3 MB - Last synced at: 5 months ago - Pushed at: almost 4 years ago - Stars: 7 - Forks: 3

CiaranWelsh/pycotools

A Python Toolbox for COPASI

Language: Jupyter Notebook - Size: 691 MB - Last synced at: about 7 hours ago - Pushed at: about 6 years ago - Stars: 7 - Forks: 4

PEtab-dev/petab_test_suite

PEtab test suite

Language: Python - Size: 214 KB - Last synced at: 14 days ago - Pushed at: 14 days ago - Stars: 6 - Forks: 3

sinagilassi/PyREMOT

Python Reactor Modeling Tools

Language: Python - Size: 1 MB - Last synced at: about 2 months ago - Pushed at: over 1 year ago - Stars: 6 - Forks: 2

JimsPalo/Parameter-Ind-Motor

This consist of a MatLab Function intended to estimate the parameters of a electrical induction motor.

Language: MATLAB - Size: 466 KB - Last synced at: 3 months ago - Pushed at: over 3 years ago - Stars: 6 - Forks: 1

jgbrasier/KFEstimate.jl

Julia package for KF and EKF parameter estimation using Automatic Differentiation

Language: Julia - Size: 851 KB - Last synced at: over 2 years ago - Pushed at: almost 4 years ago - Stars: 6 - Forks: 1

lhalloran/COMPEST

An interface connecting COMSOL Multiphysics and PEST to solve inverse modelling problems using forward finite element models (paper here: http://doi.org/10.1016/j.cageo.2019.02.001)

Language: Java - Size: 9.05 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 6 - Forks: 3

sugwg/gw170817-inclination-angle

Measuring the viewing angle of GW170817 with electromagnetic and gravitational waves

Language: Jupyter Notebook - Size: 87.5 MB - Last synced at: over 2 years ago - Pushed at: about 7 years ago - Stars: 6 - Forks: 3

ergodicio/tsadar

The Thomson scattering diagnostic offers a method by which to infer plasma parameters such as n_e, T_e. This approach uses the form factor equations to estimate those plasma parameters by fitting to observed Thomson scattering spectra.

Language: Python - Size: 160 MB - Last synced at: 13 days ago - Pushed at: 13 days ago - Stars: 5 - Forks: 5

ast0815/remu

ReMU - Response Matrix Utilities

Language: Python - Size: 114 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 5 - Forks: 1

spatstat/spatstat.model

Sub-package of spatstat containing functionality for parametric modelling and inference

Language: R - Size: 1.99 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 5 - Forks: 1

smeznar/SymbolicRegressionToolkit

Toolkit for symbolic regression/equation discovery

Language: Python - Size: 93.3 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 5 - Forks: 1

TorchMeter/torchmeter

TorchMeter⏲️: Your all-in-one tool for Pytorch model analysis, measuring Params, FLOPs/MACs(aka. MACC or MADD), Memory cost, Inference time and Throughput! ! 🚀

Language: Python - Size: 429 KB - Last synced at: 1 day ago - Pushed at: 3 months ago - Stars: 5 - Forks: 0

madsjulia/GeostatInversion.jl

Geostatistical Inversion

Language: Julia - Size: 188 KB - Last synced at: 15 days ago - Pushed at: 9 months ago - Stars: 5 - Forks: 6

spang-lab/TenSIR

SIR model parameter estimation using a novel algorithm for differentiated uniformization.

Language: Python - Size: 7.54 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 5 - Forks: 1

schmitse/lhcb-starterkit-2022

Fitting tutorial for the LHCb starterkit 2022

Language: Jupyter Notebook - Size: 3.39 MB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 5 - Forks: 1

liebermeister/model-balancing

Matlab code and example models for model balancing

Language: MATLAB - Size: 124 MB - Last synced at: over 2 years ago - Pushed at: over 3 years ago - Stars: 5 - Forks: 0

Taarak9/Time-dependent-SEIRD-Model

A Time-Dependent SEIRD Model for Forecasting the COVID-19 Transmission Dynamics

Language: Python - Size: 43.9 KB - Last synced at: about 1 year ago - Pushed at: about 4 years ago - Stars: 5 - Forks: 1

stevenalfonso/McmcHermes.jl

A package for performing Metropolis Hasting Algorithm.

Language: Julia - Size: 17.1 MB - Last synced at: 6 days ago - Pushed at: 3 months ago - Stars: 4 - Forks: 1

ngalioto/bside

Bayesian system identification toolbox

Language: Python - Size: 720 KB - Last synced at: about 2 months ago - Pushed at: 5 months ago - Stars: 4 - Forks: 0

alexandershaw4/aoptim

a gradient-based optimisation routine for highly parameterised non-linear dynamical models

Language: MATLAB - Size: 7 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 4 - Forks: 0

KRproject-tech/Parameter_estimation_demo_by_UKF

Parameter estimation Demo by UKF

Language: MATLAB - Size: 479 KB - Last synced at: about 1 month ago - Pushed at: 12 months ago - Stars: 4 - Forks: 2

Zirui24/SynMotor_FSO_ParamEst

Simulation of synchronous machine model-based sensorless control with parameter estimation and PE condition analysis

Language: Jupyter Notebook - Size: 12.6 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 4 - Forks: 0

phillipbvetter/ctsmrTMB

Fast and efficient parameter and state estimation in stochastic state space systems with Template Model Builder (TMB)

Language: R - Size: 15 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 4 - Forks: 0

bor9/estudiando_el_kay

Apuntes y soluciones de los ejercicios del libro "Fundamentals of Statistical Signal Processing: Estimation Theory" de Steven M. Kay.

Language: TeX - Size: 26.3 MB - Last synced at: 5 months ago - Pushed at: over 2 years ago - Stars: 4 - Forks: 1

shamilmamedov/beam_handling

Handling a flexible beam with a robot manipulator

Language: Python - Size: 72.1 MB - Last synced at: over 2 years ago - Pushed at: almost 3 years ago - Stars: 4 - Forks: 0

thenurhabib/dirsfind

Find hidden directories from domain and subdomain.

Language: Python - Size: 354 KB - Last synced at: over 2 years ago - Pushed at: over 3 years ago - Stars: 4 - Forks: 0

ddrous/covid-19-sird

Study of the COVID-19 epidemic in Cameroon using a SIRD model with population birth and death rates.

Language: Jupyter Notebook - Size: 8.34 MB - Last synced at: over 2 years ago - Pushed at: over 4 years ago - Stars: 4 - Forks: 0

LoLab-MSM/Gleipnir

Python toolkit for Bayesian parameter inference, model calibration, and model selection using Nested Sampling

Language: Python - Size: 359 KB - Last synced at: 4 months ago - Pushed at: over 4 years ago - Stars: 4 - Forks: 2

RRafiee/Gaussian-mixture-modelling

Gaussian mixture modelling - Unsupervised learning

Language: R - Size: 8.19 MB - Last synced at: almost 2 years ago - Pushed at: over 8 years ago - Stars: 4 - Forks: 2

MunskyGroup/SSIT

Stochastic System Identification Toolkit (SSIT) to model, analyze and design single-cell experiments

Language: MATLAB - Size: 459 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 3 - Forks: 8

karahanyilmazer/dcsem

Simulate fMRI data with Dynamic Causal Modeling. Show model degeneracy through model inversion. Address this issue with BENCH (Bayesian EstimatioN of CHange).

Language: Python - Size: 2.15 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 3 - Forks: 1

ctpeterson/SwissFit

General-purpose library for fitting models to data with correlated Gaussian-distributed noise

Language: Python - Size: 2.4 MB - Last synced at: 4 days ago - Pushed at: 3 months ago - Stars: 3 - Forks: 0

roysouvik2/colon_cancer_parameter_estimation_sensitivity_analysis

Codes for parameter estimation and sensitivity analysis of QSP models for colon cancer. This is a part of the National Cancer Institute funded project titled "Data-driven QSP software for personalized colon cancer treatment" Achyuth Manoj, Susanth Kakarla, Suvra Pal and Souvik Roy.

Language: MATLAB - Size: 2.05 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 3 - Forks: 2

msplr/nls

Experimenting with non-linear least squares problems

Language: C++ - Size: 277 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 3 - Forks: 0

kmaeda16/RCGAToolbox

RCGAToolbox is a MATLAB toolbox for parameter estimation of kinetic models.

Language: MATLAB - Size: 57.1 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 1

sarapv/Perez-Vieites2018_NestedHybridFilter

Code for the nested hybrid filters (NHFs), including four different implementations using sequential Monte Carlo (SMC), sequential quasi-Monte Carlo (SQMC), extended Kalman filters (EKFs) and ensemble Kalman filters (EnKFs). I have also included the implementation of the nested particle filter (NPF) and the two-stage filter to compare performance.

Language: MATLAB - Size: 123 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 0

mechmotum/ollie-optimization

Optimal control and parameter optimization for a maximal height ollie problem

Language: TeX - Size: 32.2 MB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 0

JAndronis/Quantum-Targeted-Energy-Transfer

Code for the paper "Quantum Targeted Energy Transfer through Machine Learning Tools" by Iason Andronis and George Arapantonis

Language: Python - Size: 6.11 MB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 3 - Forks: 0

glotaran/TIMP

TIMP is an R package for fitting superposition models that implements the partitioned variable projection algorithm. The package has been extensively applied to modeling spectroscopy and Fluorescence Lifetime Imaging Microscopy (FLIM) datasets. This is the git managed codebase of the r-forge TIMP project.

Language: R - Size: 26.1 MB - Last synced at: about 7 hours ago - Pushed at: over 2 years ago - Stars: 3 - Forks: 1

Parametric-Data-Assimilation/kse-multiparameter-learning

An AOT-based algorithm to estimate multiple unknown parameters in the Kuramoto-Saviashinski equation. Source code for the paper "Concurrent Multiparameter Learning Demonstrated on the Kuramoto-Sivashinsky Equation" by Pachev, Whitehead, and McQuarrie.

Language: Python - Size: 30.3 KB - Last synced at: 2 months ago - Pushed at: almost 3 years ago - Stars: 3 - Forks: 0

Related Topics
python 31 optimization 25 bayesian-inference 24 machine-learning 23 systems-biology 22 matlab 17 simulation 16 modeling 13 julia 11 uncertainty-quantification 11 kalman-filter 9 statistics 9 r 8 ode 8 bayesian-statistics 8 python3 8 kinetic-modeling 7 dynamical-systems 7 sbml 7 petab 7 astronomy 7 computational-biology 7 model-calibration 7 differential-equations 6 least-squares 6 bayesian-methods 6 system-identification 6 ordinary-differential-equations 6 bayesian-optimization 6 sensitivity-analysis 6 covid-19 5 markov-chain 5 deep-learning 5 scientific-computing 5 hacktoberfest 5 genetic-algorithm 5 statistical-inference 5 simulation-based-inference 5 calibration 5 gravitational-waves 5 gradient-descent 5 neuroscience 5 pytorch 5 state-space-model 5 hypothesis-testing 4 linear-regression 4 sir-model 4 virgo 4 computational-neuroscience 4 model-selection 4 stochastic-processes 4 simulation-modeling 4 high-performance-computing 4 inverse-problems 4 regression 4 ligo 4 model-analysis 4 estimation 4 data-science 4 stochastic-differential-equations 4 pycbc 4 time-series 4 systems-biology-simulation 3 automatic-differentiation 3 differentialequations 3 parallel-computing 3 differential-algebraic-equations 3 modelling 3 likelihood-free-inference 3 optimal-control 3 maximum-likelihood-estimation 3 simulink 3 numpy 3 neural-networks 3 curve-fitting 3 data 3 parameter-tuning 3 numerical-methods 3 kalman-filtering 3 signal-processing 3 approximate-bayesian-computation 3 cosmology 3 numerical-optimization 3 ode-model 3 em-algorithm 3 random-forest 3 control-systems 3 mathematical-modelling 3 systemsbiology 2 copasi 2 hydrological-modelling 2 pysb 2 combine-archive 2 variational-inference 2 parameter-identification 2 brown-university 2 fitting 2 cleanfm 2 deconvolution 2 unscented-kalman-filter 2