Topic: "ecotoxicology"
bcgov/ssdtools
An R package to fit and plot Species Sensitivity Distributions (SSDs)
Language: R - Size: 94 MB - Last synced at: 6 days ago - Pushed at: about 1 month ago - Stars: 33 - Forks: 18
andschar/standartox
Standardising toxicity data
Language: R - Size: 4.48 MB - Last synced at: 21 days ago - Pushed at: about 1 month ago - Stars: 16 - Forks: 5
open-AIMS/bayesnec
Bayesian No-Effect-Concentration estimation in R
Language: R - Size: 759 MB - Last synced at: 14 days ago - Pushed at: 14 days ago - Stars: 13 - Forks: 7
ReMobidyc/ReMobidyc
web based multi-agent simulator for individual-based modeling in population dynamics and ecotoxicology
Language: Smalltalk - Size: 19.7 MB - Last synced at: 2 days ago - Pushed at: 4 months ago - Stars: 12 - Forks: 3
zsteinmetz/envalysis
Miscellaneous Functions for Environmental Analyses
Language: R - Size: 7.03 MB - Last synced at: 3 days ago - Pushed at: 9 months ago - Stars: 8 - Forks: 1
CIRAIG/IWP_Reborn
The rebirth of IMPACT World+ in a fully automated and transparent fashion.
Language: Python - Size: 92.6 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 7 - Forks: 0
flor14/shinyssd
✨📦👩💻 shinyssd v1.0: Species Sensitivity Distributions for Ecotoxicological Risk Assessment - R-Shiny app
Language: R - Size: 14.7 MB - Last synced at: about 20 hours ago - Pushed at: over 1 year ago - Stars: 7 - Forks: 3
StyrbjornKall/TRIDENT
A collection of transformer-based models and developmental scripts presented in the publication "Transformers enable accurate prediction of acute and chronic chemical toxicity in aquatic organisms".
Language: Jupyter Notebook - Size: 1.39 GB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 4 - Forks: 1
NikaGoldring/multi-species-PBTK
This project repository is connected to the journal article ‘A Novel Multi-Species Toxicokinetic Modeling Approach in Support of Chemical Risk Assessment’ by Mangold-Döring et al. 2021. The key element of this repository is the Jupyter Notebook with the model code (Multi-species-PBTK-model.ipynb), in which you will find a more detailed description of instructions and its function.
Language: Jupyter Notebook - Size: 1.45 MB - Last synced at: 11 months ago - Pushed at: about 4 years ago - Stars: 3 - Forks: 2
ChrisMantegna/WDFWmussels
Biochemical biomarker analysis of mussels from 74 sites across Puget Sound from the WDFW 'Mussel Watch' program.
Language: R - Size: 219 MB - Last synced at: 11 days ago - Pushed at: 11 days ago - Stars: 2 - Forks: 0
StyrbjornKall/TRIDENT_application
Source code for the web application associated with "Transformers enable accurate prediction of acute and chronic chemical toxicity in aquatic organisms".
Language: Python - Size: 867 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 2 - Forks: 0
cvasi-tktd/cvasi
An R package to simulate ecotox TK/TD models, calculate effects, derive effect profiles, and to fit model parameters to observed data.
Language: R - Size: 13.2 MB - Last synced at: about 1 month ago - Pushed at: 2 months ago - Stars: 2 - Forks: 2
nicholaswunz/BPA-meta-analysis
Paper - Effect of the plastic pollutant bisphenol A on the biology of aquatic organisms: A meta-analysis
Language: R - Size: 2.08 MB - Last synced at: 3 months ago - Pushed at: about 3 years ago - Stars: 2 - Forks: 0
tsufz/REcoTox
REcoTox is a semi-automated, interactive R workflow to process US EPA ECOTOX Knowledgebase entire database ASCII files
Language: HTML - Size: 1.88 MB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 1
backmind/autoRICEWQ
This project aims to be a handler for input creation and running of multiple RICEWQ simulations.
Language: Python - Size: 587 KB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 1
KyoHiki/SSD_chronic_prediction
Prediction of chronic SSD
Size: 2.96 MB - Last synced at: over 1 year ago - Pushed at: about 3 years ago - Stars: 1 - Forks: 0
modelEAU/ELA_msl
Ecosystem model developped by Ludiwine Clouzot and Peter A. Vanrolleghem
Size: 49.8 KB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0
RaoulWolf/FMI330
Example R scripts to create a dose-response curve and extract ECx-values.
Language: R - Size: 1.97 MB - Last synced at: over 1 year ago - Pushed at: almost 6 years ago - Stars: 1 - Forks: 1
bbellier/biolutoxR_package
Code of the biolutoxR package which is useful for data analysis of toxicity test based on bacterial bioluminescence inhibition.
Language: R - Size: 10.2 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 1
KyoHiki/drc_ecotox
Dose-response relationship analysis for ecotoxicity data
Language: R - Size: 302 KB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0
bbellier/biolutoxR_website
Site for the biolutoxR package which is useful for data analysis of toxicity test based on bacterial bioluminescence inhibition.
Language: CSS - Size: 10.8 MB - Last synced at: 2 months ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0
cvasi-tktd/cvasi.ui
Graphical user interface for ecotox effect modelling using the cvasi package
Language: R - Size: 369 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0
sarahtanja/coral-embryo-leachate
A single stressor experiment testing the embryonic development of Montipora capitata corals when exposed to PVC leachate.
Language: HTML - Size: 315 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0
bbellier/microtoxR_website
Site for the microtoxR packag which is useful for data analysis of Microtox® acute toxicity test.
Language: CSS - Size: 10.2 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0
mrmic1/FLX-mosquitofish-mesocosm Fork of theodi/data-publishing-template
Dataset for Pharmaceutical pollution disrupts freshwater communities and impairs their recovery from an invasive fish
Size: 163 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
gmoeu/transcriptional-biomarkers-metaanalysis
Data and R code to reproduce the results from 'Transcriptional responses as biomarkers of general toxicity' (Ekelund Ugge et al. 2022).
Size: 230 MB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 1
laurentboualit/Tadpoles_tracking
A R script for extracting tadpoles swimming behavior and morphological traits.
Language: R - Size: 9.77 KB - Last synced at: over 1 year ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0
pythonpandas303/KeyWest
In coordination with Regis University.
Language: Python - Size: 37.1 KB - Last synced at: over 1 year ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0
yr542/MS_Thesis
This is a folder for my M.S. Thesis related information.
Size: 362 KB - Last synced at: over 1 year ago - Pushed at: about 4 years ago - Stars: 0 - Forks: 0
LucyDimitrova/plant-growth-inhibition-toxicity
Experiment data and analysis for calculating the effects of a toxicant (CuSO4.5H2O) on the growth of plants.
Language: HTML - Size: 1.54 MB - Last synced at: over 1 year ago - Pushed at: about 4 years ago - Stars: 0 - Forks: 0
AvitBhowmik/gisapp18
This is the GitHub repository for the block course "Geoinformation Systems (GIS) Application" offered by the Institute for Environmental Sciences, University of Koblenz-Landau at the Winter Semester 2018. Please scroll below to read the instructions.
Language: TeX - Size: 30.8 MB - Last synced at: over 1 year ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 1
