Topic: "flux-variability"
cnapy-org/CNApy
An integrated visual environment for metabolic modeling with common methods such as FBA, FVA and Elementary Flux Modes, and advanced features such as thermodynamic methods, extended Minimal Cut Sets, OptKnock, RobustKnock, OptCouple and more!
Language: Python - Size: 6.78 MB - Last synced at: 15 days ago - Pushed at: 3 months ago - Stars: 54 - Forks: 8
mjenior/riptide
Reaction Inclusion by Parsimony and Transcript Distribution
Language: Python - Size: 4.53 MB - Last synced at: about 1 month ago - Pushed at: about 2 years ago - Stars: 11 - Forks: 3
openCONTRABASS/CONTRABASS
Constraint-based model vulnerabilities analysis - Python analysis tool http://contrabass.unizar.es
Language: HTML - Size: 5.61 MB - Last synced at: 30 days ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 0
Biomathsys/DPM-SAU-in-HSA-nose
This repository introduces the codes applied to the nasal microbial community of the latest available curated GEMs of D. pigrum and S. aureus.
Language: Jupyter Notebook - Size: 3.35 MB - Last synced at: almost 2 years ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0
Biomathsys/ncmw Fork of manuelgloeckler/ncmw
A metabolic modeling workflow for communities of organisms in an nasal medium.
Language: Python - Size: 27.5 MB - Last synced at: almost 2 years ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0