An open API service providing repository metadata for many open source software ecosystems.

Topic: "transcriptomics"

scverse/scanpy

Single-cell analysis in Python. Scales to >100M cells.

Language: Python - Size: 41 MB - Last synced at: 2 days ago - Pushed at: 4 days ago - Stars: 2,082 - Forks: 629

pachterlab/gget

🧬 gget enables efficient querying of genomic reference databases

Language: Python - Size: 328 MB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 1,020 - Forks: 77

chanzuckerberg/cellxgene

An interactive explorer for single-cell transcriptomics data

Language: JavaScript - Size: 239 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 667 - Forks: 132

owkin/PyDESeq2

A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

Language: Python - Size: 1.37 MB - Last synced at: 8 days ago - Pushed at: 8 days ago - Stars: 645 - Forks: 74

scverse/anndata

Annotated data.

Language: Python - Size: 5.62 MB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 621 - Forks: 164

aertslab/pySCENIC

pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.

Language: Python - Size: 34.7 MB - Last synced at: 8 days ago - Pushed at: about 1 year ago - Stars: 500 - Forks: 190

mahmoodlab/PathomicFusion

Fusing Histology and Genomics via Deep Learning - IEEE TMI

Language: Jupyter Notebook - Size: 42.4 MB - Last synced at: about 1 month ago - Pushed at: over 2 years ago - Stars: 300 - Forks: 84

theislab/scgen

Single cell perturbation prediction

Language: Python - Size: 69.3 MB - Last synced at: 8 days ago - Pushed at: 5 months ago - Stars: 292 - Forks: 59

opencobra/cobratoolbox

The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:

Language: MATLAB - Size: 1.59 GB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 262 - Forks: 323

spacetx/starfish

starfish: unified pipelines for image-based transcriptomics

Language: Python - Size: 114 MB - Last synced at: about 7 hours ago - Pushed at: about 8 hours ago - Stars: 232 - Forks: 70

kharchenkolab/pagoda2

R package for analyzing and interactively exploring large-scale single-cell RNA-seq datasets

Language: JavaScript - Size: 78.4 MB - Last synced at: 20 days ago - Pushed at: about 1 year ago - Stars: 228 - Forks: 47

ZJUFanLab/scCATCH

Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data

Language: R - Size: 52 MB - Last synced at: 7 days ago - Pushed at: about 2 years ago - Stars: 227 - Forks: 36

iSEE/iSEE

R/shiny interface for interactive visualization of data in SummarizedExperiment objects

Language: R - Size: 17.9 MB - Last synced at: 28 days ago - Pushed at: 28 days ago - Stars: 225 - Forks: 43

GoekeLab/bambu

Reference-guided transcript discovery and quantification for long read RNA-Seq data

Language: R - Size: 549 MB - Last synced at: 6 days ago - Pushed at: 7 days ago - Stars: 207 - Forks: 24

theislab/diffxpy

Differential expression analysis for single-cell RNA-seq data.

Language: Python - Size: 1.71 MB - Last synced at: 12 days ago - Pushed at: 3 months ago - Stars: 197 - Forks: 23

keller-mark/awesome-biological-visualizations

A list of web-based interactive biological data visualizations.

Size: 141 KB - Last synced at: 6 days ago - Pushed at: about 1 year ago - Stars: 194 - Forks: 17

saezlab/decoupler-py

Python package to perform enrichment analysis from omics data.

Language: Python - Size: 83.1 MB - Last synced at: 13 days ago - Pushed at: 13 days ago - Stars: 192 - Forks: 28

COMBINE-lab/alevin-fry

🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.

Language: Rust - Size: 4.32 MB - Last synced at: 14 days ago - Pushed at: 2 months ago - Stars: 182 - Forks: 16

hms-dbmi/scde

R package for analyzing single-cell RNA-seq data

Language: R - Size: 14 MB - Last synced at: about 1 month ago - Pushed at: about 1 year ago - Stars: 174 - Forks: 66

stemangiola/tidybulk

Brings bulk and pseudobulk transcriptomics to the tidyverse

Language: R - Size: 99.3 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 171 - Forks: 24

obophenotype/cell-ontology

An ontology of cell types

Language: Makefile - Size: 399 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 169 - Forks: 53

ablab/IsoQuant

Transcript discovery and quantification with long RNA reads (Nanopores and PacBio)

Language: Python - Size: 19.7 MB - Last synced at: 8 days ago - Pushed at: 8 days ago - Stars: 164 - Forks: 15

GoekeLab/xpore

Identification of differential RNA modifications from nanopore direct RNA sequencing

Language: Python - Size: 5 MB - Last synced at: 6 days ago - Pushed at: 6 months ago - Stars: 148 - Forks: 23

genular/pandora

PANDORA :computer:

Language: Vue - Size: 16.4 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 135 - Forks: 21

GuyTeichman/RNAlysis

Analyze your RNA sequencing data without writing a single line of code

Language: Python - Size: 795 MB - Last synced at: 4 days ago - Pushed at: 3 months ago - Stars: 133 - Forks: 13

GoekeLab/sg-nex-data

Nanopore RNA-Seq data from the Singapore Nanopore-Expression Project

Language: Jupyter Notebook - Size: 1.75 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 110 - Forks: 25

AllenInstitute/scrattch.hicat

Hierarchical, iterative clustering for analysis of transcriptomics data in R

Language: HTML - Size: 154 MB - Last synced at: about 1 month ago - Pushed at: 12 months ago - Stars: 110 - Forks: 31

ZJUFanLab/scDeepSort

Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network

Language: Python - Size: 19.4 MB - Last synced at: 7 days ago - Pushed at: almost 2 years ago - Stars: 103 - Forks: 19

quadbio/Pando

Multiome GRN inference.

Language: R - Size: 35.3 MB - Last synced at: 12 months ago - Pushed at: about 1 year ago - Stars: 102 - Forks: 21

rajewsky-lab/openst

Open-ST: profile and analyze tissue transcriptomes in 3D with high resolution in your lab

Language: HTML - Size: 175 MB - Last synced at: 17 days ago - Pushed at: 6 months ago - Stars: 97 - Forks: 17

JEFworks-Lab/HoneyBADGER

HMM-integrated Bayesian approach for detecting CNV and LOH events from single-cell RNA-seq data

Language: R - Size: 52.8 MB - Last synced at: about 2 months ago - Pushed at: almost 4 years ago - Stars: 96 - Forks: 31

dib-lab/dammit

just annotate it, dammit!

Language: Python - Size: 12.1 MB - Last synced at: about 1 month ago - Pushed at: over 1 year ago - Stars: 91 - Forks: 28

pachterlab/voyager

From geospatial to spatial -omics

Language: R - Size: 4.32 GB - Last synced at: about 1 month ago - Pushed at: 2 months ago - Stars: 90 - Forks: 10

alexisvdb/singleCellHaystack

Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).

Language: R - Size: 78.2 MB - Last synced at: 18 days ago - Pushed at: 8 months ago - Stars: 81 - Forks: 9

nanoporetech/pychopper 📦

A tool to identify, orient, trim and rescue full length cDNA reads

Language: Python - Size: 52 MB - Last synced at: about 1 month ago - Pushed at: almost 3 years ago - Stars: 81 - Forks: 22

lilab-bcb/cirrocumulus

Bring your single-cell data to life

Language: JavaScript - Size: 223 MB - Last synced at: 2 days ago - Pushed at: 2 months ago - Stars: 80 - Forks: 17

federicomarini/GeneTonic

Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail

Language: R - Size: 121 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 78 - Forks: 10

JEFworks/MUDAN

Multi-sample Unified Discriminant ANalysis

Language: R - Size: 60.1 MB - Last synced at: about 2 months ago - Pushed at: about 2 years ago - Stars: 73 - Forks: 12

benben-miao/TOmicsVis

Transcriptomics Visualization R package.

Language: R - Size: 198 MB - Last synced at: 27 days ago - Pushed at: 27 days ago - Stars: 71 - Forks: 15

tidyomics/tidyomics

Easily install and load packages from the tidyomcis ecosystem

Language: R - Size: 107 KB - Last synced at: 14 days ago - Pushed at: about 1 year ago - Stars: 67 - Forks: 0

Novartis/cellxgene-gateway

Cellxgene Gateway allows you to use the Cellxgene Server provided by the Chan Zuckerberg Institute (https://github.com/chanzuckerberg/cellxgene) with multiple datasets.

Language: Python - Size: 203 KB - Last synced at: 3 days ago - Pushed at: about 1 year ago - Stars: 64 - Forks: 34

nf-core/spatialvi

Pipeline for processing spatially-resolved gene counts with spatial coordinates and image data. Designed for 10x Genomics Visium transcriptomics.

Language: Nextflow - Size: 7.02 MB - Last synced at: about 15 hours ago - Pushed at: about 16 hours ago - Stars: 62 - Forks: 23

saezlab/cosmosR

COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data sets.

Language: R - Size: 53.2 MB - Last synced at: 24 days ago - Pushed at: 2 months ago - Stars: 60 - Forks: 16

NathanSkene/EWCE

Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.

Language: R - Size: 38.3 MB - Last synced at: 30 days ago - Pushed at: 3 months ago - Stars: 57 - Forks: 25

jackbibby1/SCPA

R package for pathway analysis in scRNA-seq data

Language: R - Size: 41.2 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 57 - Forks: 5

COMBINE-lab/terminus

Language: Rust - Size: 406 KB - Last synced at: about 1 year ago - Pushed at: almost 3 years ago - Stars: 55 - Forks: 3

bpucker/teaching

This repository gives an overview of my teaching activities. Links to slides and data sets are included. Feel free to re-use my content.

Size: 354 MB - Last synced at: 12 days ago - Pushed at: 12 days ago - Stars: 51 - Forks: 9

arc85/celltalker 📦

Inference of cell-cell communication from single-cell RNAseq data

Language: R - Size: 11.1 MB - Last synced at: 12 days ago - Pushed at: 21 days ago - Stars: 48 - Forks: 20

pinellolab/pyrovelocity

𝒫robabilistic modeling of RNA velocity ⬱

Language: Python - Size: 23.6 MB - Last synced at: 6 days ago - Pushed at: 7 days ago - Stars: 47 - Forks: 5

GuangyuWangLab2021/cellDancer

Predict RNA velocity through deep learning

Language: Jupyter Notebook - Size: 764 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 46 - Forks: 10

nanoporetech/pinfish 📦

Tools to annotate genomes using long read transcriptomics data

Language: Go - Size: 120 MB - Last synced at: about 1 month ago - Pushed at: over 4 years ago - Stars: 45 - Forks: 13

theislab/DRVI

Unsupervised Deep Disentangled Representation of Single-Cell Omics

Language: Python - Size: 14 MB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 41 - Forks: 3

wanglab-broad/ClusterMap

ClusterMap for multi-scale clustering analysis of spatial gene expression

Language: Jupyter Notebook - Size: 171 MB - Last synced at: 6 months ago - Pushed at: 10 months ago - Stars: 41 - Forks: 11

markziemann/dee2

Digital Expression Explorer 2 (DEE2): a repository of uniformly processed RNA-seq data

Language: Shell - Size: 56 MB - Last synced at: 12 days ago - Pushed at: 12 days ago - Stars: 40 - Forks: 7

KatrionaGoldmann/volcano3D

An R package to plot interactive three-way differential expression analysis

Language: HTML - Size: 219 MB - Last synced at: 18 days ago - Pushed at: over 1 year ago - Stars: 37 - Forks: 8

czbiohub-sf/tabula-sapiens

Single Cell Transcriptomics of 25 Human Organs to Create a Tabula Sapiens

Language: Jupyter Notebook - Size: 788 MB - Last synced at: 11 months ago - Pushed at: almost 2 years ago - Stars: 37 - Forks: 7

AllenInstitute/scrattch

Single cell RNA-seq analysis for transcriptomic type characterization

Language: R - Size: 97.3 MB - Last synced at: 24 days ago - Pushed at: 24 days ago - Stars: 36 - Forks: 3

zavolanlab/zarp

The Zavolab Automated RNA-seq Pipeline

Language: Python - Size: 27 MB - Last synced at: 22 days ago - Pushed at: 22 days ago - Stars: 35 - Forks: 5

OceanGenomics/mudskipper

A tool for projecting genomic alignments to transcriptomic coordinates

Language: Rust - Size: 18.3 MB - Last synced at: 30 days ago - Pushed at: 12 months ago - Stars: 35 - Forks: 8

dohlee/chromoformer

The official code implementation for Chromoformer in PyTorch. (Lee et al., Nature Communications. 2022)

Language: Python - Size: 137 MB - Last synced at: 14 days ago - Pushed at: over 1 year ago - Stars: 35 - Forks: 2

emanuega/MERlin

MERlin is an extensible analysis pipeline applied to decoding MERFISH data

Language: Python - Size: 16.2 MB - Last synced at: about 1 month ago - Pushed at: over 3 years ago - Stars: 35 - Forks: 31

Oshlack/MINTIE

Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.

Language: Python - Size: 21.8 MB - Last synced at: 6 months ago - Pushed at: 11 months ago - Stars: 34 - Forks: 7

microbiomedata/nmdc-schema

National Microbiome Data Collaborative (NMDC) unified data model

Language: Python - Size: 145 MB - Last synced at: about 7 hours ago - Pushed at: 3 days ago - Stars: 33 - Forks: 9

urmi-21/MetaOmGraph

MetaOmGraph: a workbench for interactive exploratory data analysis of large expression datasets

Language: Java - Size: 175 MB - Last synced at: about 1 year ago - Pushed at: almost 3 years ago - Stars: 32 - Forks: 14

PaccMann/paccmann_rl

Code pipeline for the PaccMann^RL in iScience: https://www.cell.com/iscience/fulltext/S2589-0042(21)00237-6

Size: 31.3 KB - Last synced at: about 2 months ago - Pushed at: over 3 years ago - Stars: 32 - Forks: 9

JEFworks-Lab/CRAWDAD

Cell-type Relationship Analysis Workflow Done Across Distances

Language: R - Size: 970 MB - Last synced at: about 2 months ago - Pushed at: 3 months ago - Stars: 31 - Forks: 4

orangeSi/GSSplayground 📦

Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), add synteny among genome fragments or add crosslink among features, add short(PE/MP)/long reads(pacbio or nanopore) mapping or snpindel in vcf(not support complex sv yet), support all CIGAR of sam alignment, directly modify almost all features in Chrome by click the feature

Language: HTML - Size: 148 MB - Last synced at: 10 months ago - Pushed at: almost 5 years ago - Stars: 31 - Forks: 7

MannLabs/OmicLearn Fork of DivyaKarade/OmicLearn

🧪 🖥 Transparent exploration of machine learning for biomarker discovery from proteomics and omics data

Language: Python - Size: 22.2 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 30 - Forks: 8

ELTEbioinformatics/mulea Fork of Biocodings/MulEA

mulea - an R package for enrichment analysis using various ontologies and empirical false discovery rate

Language: R - Size: 298 MB - Last synced at: 6 days ago - Pushed at: 5 months ago - Stars: 29 - Forks: 1

Novartis/pisces

PISCES is a pipeline for rapid transcript quantitation, genetic fingerprinting, and quality control assessment of RNAseq libraries using Salmon.

Language: Python - Size: 17.6 MB - Last synced at: 30 days ago - Pushed at: 12 months ago - Stars: 29 - Forks: 3

thelovelab/fishpond

Differential expression and allelic analysis, nonparametric statistics

Language: R - Size: 7.89 MB - Last synced at: about 1 month ago - Pushed at: 4 months ago - Stars: 28 - Forks: 10

dib-lab/elvers

(formerly eelpond) an automated RNA-Seq workflow system

Language: Python - Size: 106 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 28 - Forks: 3

Bayer-Group/cellenium

Cellenium is a FAIR and scalable interactive visual analytics app for scRNA-Seq data (single-cell RNA sequencing).

Language: Jupyter Notebook - Size: 12.4 MB - Last synced at: about 1 month ago - Pushed at: over 1 year ago - Stars: 27 - Forks: 5

MatthiasLienhard/isotools

IsoTools is a python module for Long Read Transcriptome Sequencing (LRTS) analysis.

Language: Jupyter Notebook - Size: 38 MB - Last synced at: 14 days ago - Pushed at: over 1 year ago - Stars: 27 - Forks: 7

nanoporetech/pipeline-pinfish-analysis 📦

Pipeline for annotating genomes using long read transcriptomics data with pinfish

Language: Python - Size: 137 KB - Last synced at: about 1 month ago - Pushed at: over 4 years ago - Stars: 27 - Forks: 5

stemangiola/bioc_2020_tidytranscriptomics

Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap

Language: R - Size: 48.5 MB - Last synced at: 10 months ago - Pushed at: over 4 years ago - Stars: 27 - Forks: 10

secrierlab/SpottedPy

Hotspot cluster distance analysis in spatial transcriptomic data

Language: Jupyter Notebook - Size: 41.6 MB - Last synced at: 25 days ago - Pushed at: 3 months ago - Stars: 26 - Forks: 0

aljpetri/isONform

De novo construction of isoforms from long-read data

Language: Python - Size: 771 KB - Last synced at: 7 days ago - Pushed at: 6 months ago - Stars: 26 - Forks: 3

StatBiomed/UniTVelo

UniTVelo, Temporally Unified RNA Velocity for single cell trajectory inference

Language: Jupyter Notebook - Size: 20.2 MB - Last synced at: about 1 month ago - Pushed at: 6 months ago - Stars: 26 - Forks: 8

AllenInstitute/scrattch.vis

scRNA-seq data visualization from scrattch

Language: R - Size: 104 MB - Last synced at: about 1 month ago - Pushed at: about 1 year ago - Stars: 26 - Forks: 2

nanoporetech/pipeline-nanopore-denovo-isoforms 📦

Pipeline for de novo clustering of long transcriptomic reads

Language: Python - Size: 27.2 MB - Last synced at: about 1 month ago - Pushed at: over 3 years ago - Stars: 26 - Forks: 6

ajitjohnson/imsig

Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours

Language: R - Size: 285 KB - Last synced at: 12 months ago - Pushed at: over 4 years ago - Stars: 25 - Forks: 7

PavlidisLab/rnaseq-pipeline

RNA-seq pipeline for raw sequence alignment and transcript/gene quantification.

Language: Shell - Size: 43.5 MB - Last synced at: 14 days ago - Pushed at: 14 days ago - Stars: 24 - Forks: 5

cantinilab/HuMMuS

Molecular interactions inference from single-cell multi-omics data

Language: R - Size: 79.4 MB - Last synced at: 28 days ago - Pushed at: 28 days ago - Stars: 24 - Forks: 4

glasgowcompbio/pyMultiOmics

Python toolbox for multi-omics data mapping and analysis

Language: Jupyter Notebook - Size: 45.9 MB - Last synced at: 23 days ago - Pushed at: about 2 years ago - Stars: 24 - Forks: 5

PalMuc/TransPi

TransPi – a comprehensive TRanscriptome ANalysiS PIpeline for de novo transcriptome assembly

Language: Nextflow - Size: 48.6 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 24 - Forks: 14

sdomanskyi/DigitalCellSorter

Digital Cell Sorter (DCS): single cell RNA-seq analysis toolkit. Documentation:

Language: Python - Size: 1020 MB - Last synced at: 14 days ago - Pushed at: almost 4 years ago - Stars: 24 - Forks: 10

DeplanckeLab/ASAP

ASAP : Automated Single-cell Analysis Pipeline

Language: Java - Size: 170 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 23 - Forks: 10

klarman-cell-observatory/scPlot

Single cell interactive plotting tools

Language: Jupyter Notebook - Size: 37.9 MB - Last synced at: 5 days ago - Pushed at: almost 5 years ago - Stars: 23 - Forks: 8

aaronwtr/PertEval

Evaluation suite for transcriptomic perturbation effect prediction models. Includes support for single-cell foundation models.

Language: Python - Size: 19.2 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 22 - Forks: 2

LieberInstitute/spatialDLPFC

spatialDLPFC project involving Visium (n = 30), Visium SPG (n = 4) and snRNA-seq (n = 19) samples

Language: HTML - Size: 14.9 GB - Last synced at: about 2 months ago - Pushed at: 3 months ago - Stars: 22 - Forks: 3

myles-lewis/glmmSeq

Gene-level general linear mixed model

Language: R - Size: 13.9 MB - Last synced at: 20 days ago - Pushed at: 4 months ago - Stars: 21 - Forks: 10

luciorq/isoformic

Isoform-level functional RNA-Seq analysis 🧬

Language: R - Size: 17.9 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 21 - Forks: 1

stasaki/DEcode

A prediction model for differential gene expression (DE) based on genome-wide regulatory interactions

Language: Jupyter Notebook - Size: 97.7 MB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 21 - Forks: 9

chengfgao/TopicVelo

TopicVelo: Dissection and Integration of Bursty Transcriptional Dynamics for Complex Systems

Language: Jupyter Notebook - Size: 9.09 MB - Last synced at: 19 days ago - Pushed at: 19 days ago - Stars: 20 - Forks: 2

saramasarone/enrich_omics

A python package to explore pathways, diseases and drugs associated to a list of targets (genes, proteins, etc)

Language: Python - Size: 3.19 MB - Last synced at: 14 days ago - Pushed at: 6 months ago - Stars: 19 - Forks: 0

OmicsSuite/OmicsSuite.github.io

OmicsSuite website for releasing new version.

Language: HTML - Size: 14.9 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 19 - Forks: 2

Kumquatum/GWENA

Gene Co-expression Network analysis pipeline

Language: R - Size: 10.1 MB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 19 - Forks: 3

cran-task-views/Omics

CRAN Task View: Genomics, Proteomics, Metabolomics, Transcriptomics, and Other Omics

Size: 77.1 KB - Last synced at: about 16 hours ago - Pushed at: about 17 hours ago - Stars: 18 - Forks: 5

sanjaynagi/rna-seq-pop

Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data

Language: Jupyter Notebook - Size: 99.5 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 18 - Forks: 9

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