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GitHub / saezlab / cosmosR
COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data sets.
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/saezlab%2FcosmosR
Stars: 53
Forks: 15
Open Issues: 4
License: gpl-3.0
Language: R
Repo Size: 45.1 MB
Dependencies:
23
Created: about 4 years ago
Updated: 16 days ago
Last pushed: 5 months ago
Last synced: about 2 hours ago
Topics: data-integration, metabolomic-data, network-modelling, phosphoproteomics, proteomics, transcriptomics
Files
Dependencies
- R >= 4.1 depends
- CARNIVAL * imports
- GSEABase * imports
- dorothea * imports
- dplyr * imports
- igraph * imports
- progress * imports
- purrr * imports
- rlang * imports
- stringr * imports
- utils * imports
- visNetwork * imports
- ggplot2 * suggests
- knitr * suggests
- piano * suggests
- rmarkdown * suggests
- testthat * suggests
- actions/cache v2 composite
- actions/checkout v2 composite
- actions/upload-artifact master composite
- docker/build-push-action v1 composite
- r-lib/actions/setup-pandoc v2 composite
- r-lib/actions/setup-r v2 composite