Topic: "multi-omics"
bioFAM/MOFA2
Multi-Omics Factor Analysis
Language: R - Size: 162 MB - Last synced at: 14 days ago - Pushed at: 11 months ago - Stars: 329 - Forks: 56
scverse/muon
muon is a multimodal omics Python framework
Language: Python - Size: 5.05 MB - Last synced at: 2 days ago - Pushed at: 3 months ago - Stars: 235 - Forks: 31
scverse/mudata
Multimodal Data (.h5mu) implementation for Python
Language: Python - Size: 1.05 MB - Last synced at: 1 day ago - Pushed at: 10 days ago - Stars: 97 - Forks: 19
RasmussenLab/MOVE
MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations
Language: Jupyter Notebook - Size: 540 MB - Last synced at: 3 days ago - Pushed at: 7 months ago - Stars: 77 - Forks: 27
BIMSBbioinfo/maui
Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit
Language: Jupyter Notebook - Size: 3.06 MB - Last synced at: 1 day ago - Pushed at: almost 2 years ago - Stars: 49 - Forks: 21
zhangxiaoyu11/OmiEmbed
Multi-task deep learning framework for multi-omics data analysis
Language: Python - Size: 17.9 MB - Last synced at: 8 days ago - Pushed at: about 3 years ago - Stars: 45 - Forks: 20
cantinilab/Mowgli
Single-cell multi-omics integration using Optimal Transport
Language: Python - Size: 7.84 MB - Last synced at: 3 months ago - Pushed at: 8 months ago - Stars: 41 - Forks: 5
wukevin/babel
Deep learning model for single-cell inference of multi-omic profiles from a single input modality.
Language: Jupyter Notebook - Size: 316 MB - Last synced at: about 1 month ago - Pushed at: almost 2 years ago - Stars: 41 - Forks: 16
biobakery/melonnpan
Model-based Genomically Informed High-dimensional Predictor of Microbial Community Metabolic Profiles
Language: R - Size: 3.81 MB - Last synced at: about 1 month ago - Pushed at: about 1 year ago - Stars: 35 - Forks: 8
selbouhaddani/OmicsPLS
R package for High dimensional data analysis and integration with O2PLS!
Language: HTML - Size: 31.4 MB - Last synced at: about 1 month ago - Pushed at: about 2 months ago - Stars: 32 - Forks: 8
JonnyTran/OpenOmics
A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.
Language: Python - Size: 68.5 MB - Last synced at: 8 days ago - Pushed at: 10 months ago - Stars: 32 - Forks: 11
PMBio/MuDataSeurat
.h5mu files interface for Seurat
Language: R - Size: 3.98 MB - Last synced at: about 1 month ago - Pushed at: over 1 year ago - Stars: 29 - Forks: 13
scverse/Muon.jl
Muon for Julia
Language: Julia - Size: 1.05 MB - Last synced at: 14 days ago - Pushed at: 3 months ago - Stars: 28 - Forks: 6
krassowski/multi-omics-state-of-the-field
Analyses for "State of the field in multi-omics research: from computational needs to data mining and sharing"
Language: Jupyter Notebook - Size: 16.6 MB - Last synced at: 27 days ago - Pushed at: almost 2 years ago - Stars: 26 - Forks: 13
cantinilab/HuMMuS
Molecular interactions inference from single-cell multi-omics data
Language: R - Size: 80.7 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 24 - Forks: 5
abodein/timeOmics
Time-Course Multi-Omics data integration
Language: R - Size: 3.65 MB - Last synced at: about 2 months ago - Pushed at: about 1 year ago - Stars: 24 - Forks: 6
glasgowcompbio/pyMultiOmics
Python toolbox for multi-omics data mapping and analysis
Language: Jupyter Notebook - Size: 45.9 MB - Last synced at: 27 days ago - Pushed at: about 2 years ago - Stars: 24 - Forks: 5
pievos101/GNN-SubNet
Disease subnetwork detection with explainable Graph Neural Networks
Language: Python - Size: 57.5 MB - Last synced at: 8 months ago - Pushed at: about 1 year ago - Stars: 21 - Forks: 4
himelmallick/IntegratedLearner
Integrated Machine Learning for Multi-omics Classification and Prediction
Language: HTML - Size: 22.7 MB - Last synced at: 11 days ago - Pushed at: 11 days ago - Stars: 20 - Forks: 8
OmicsSuite/OmicsSuite.github.io
OmicsSuite website for releasing new version.
Language: HTML - Size: 14.9 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 19 - Forks: 2
epruesse/ymp
Flexible omics pipeline
Language: Python - Size: 3.84 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 18 - Forks: 4
ashleymaeconard/TIMEOR
TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R
Language: R - Size: 404 MB - Last synced at: 10 months ago - Pushed at: about 3 years ago - Stars: 17 - Forks: 4
Noble-Lab/HiCFoundation
HiCFoundation is a generalizable Hi-C foundation model for chromatin architecture, single-cell and multi-omics analysis across species.
Language: Python - Size: 42.8 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 16 - Forks: 2
krassowski/drug-disease-profile-matching
Multi-omics disease sub-type specific drug repositioning aided with expression signatures from ConnectivityMap
Language: Jupyter Notebook - Size: 6.86 MB - Last synced at: 27 days ago - Pushed at: about 5 years ago - Stars: 16 - Forks: 2
LamineTourelab/MOGONET
MOGONET (Multi-Omics Graph cOnvolutional NETworks) is multi-omics data integrative analysis framework for classification tasks in biomedical applications.
Language: Jupyter Notebook - Size: 56.6 MB - Last synced at: 27 days ago - Pushed at: about 2 months ago - Stars: 14 - Forks: 1
chenweng1991/redeemR
R package for ReDeeM: single-cell Regulatory multi-omics with Deep Mitochondrial mutation profiling.
Language: Jupyter Notebook - Size: 17.2 MB - Last synced at: 15 days ago - Pushed at: 15 days ago - Stars: 13 - Forks: 5
scverse/muon-tutorials
Tutorials for multimodal omics data analysis
Language: Jupyter Notebook - Size: 17.7 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 13 - Forks: 7
becavin-lab/bacnet
BACNET is a Java based platform to develop website for multi-omics analysis
Language: Java - Size: 148 MB - Last synced at: 10 months ago - Pushed at: about 2 years ago - Stars: 13 - Forks: 1
ocbe-uio/survomics
Tutorial on survival modeling with omics data
Language: TeX - Size: 16.5 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 12 - Forks: 1
bioFAM/mofaflex
factor models for omics data
Language: Python - Size: 161 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 11 - Forks: 1
nf-core/hicar
Pipeline for HiCAR data, a robust and sensitive multi-omic co-assay for simultaneous measurement of transcriptome, chromatin accessibility and cis-regulatory chromatin contacts.
Language: Nextflow - Size: 34.7 MB - Last synced at: 16 days ago - Pushed at: 16 days ago - Stars: 10 - Forks: 8
garimasingh128/Ovarian-Cancer-Subtypes-Identification
🧠Deep Learning-based✔️ Ovarian Cancer🙅🏻‍♀️ Subtypes Identification using Multi-Omics Data✅
Language: Jupyter Notebook - Size: 2.64 MB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 8 - Forks: 1
jguhlin/ODG
ODG: Omics Database Generator - Integration toolkit for -omics data
Language: Clojure - Size: 165 MB - Last synced at: about 1 year ago - Pushed at: over 6 years ago - Stars: 7 - Forks: 4
calebclayreagor/DELAY
Depicting pseudotime-lagged causality for accurate gene-regulatory inference
Language: Python - Size: 359 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 6 - Forks: 0
guokai8/o2plsda
Omics data integration with o2plsda
Language: R - Size: 199 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 6 - Forks: 0
maxsonBraunLab/CITEViz
CITEViz: Replicating the Interactive Flow Cytometry Workflow in CITE-Seq
Language: R - Size: 83.3 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 6 - Forks: 5
ZJUFanLab/SCOTCH
SCOTCH is a Single-Cell multi-modal integration method leveraging the Optimal Transport algorithm and a cell matCHing strategy
Language: Jupyter Notebook - Size: 5.11 MB - Last synced at: about 1 month ago - Pushed at: about 1 year ago - Stars: 6 - Forks: 0
CBIGR/SUBATOMIC
The SUbgraph BAsed mulTI-OMIcs Clustering (SUBATOMIC) framework infers interpretable modules with a specific topology.
Language: Python - Size: 62.4 MB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 6 - Forks: 0
Shamir-Lab/MONET
MONET
Language: R - Size: 5.97 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 6 - Forks: 1
acabassi/coca
R package for COCA: Cluster-of-Clusters Analysis
Language: R - Size: 2.28 MB - Last synced at: 29 days ago - Pushed at: almost 5 years ago - Stars: 6 - Forks: 2
xing-lab-pitt/GraphVelo
Inferring multi-modality dynamics for single cell genomics data
Language: Jupyter Notebook - Size: 88 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 5 - Forks: 1
ilia-kats/MuData
MuData-compatible storage for bioconductor's MultiAssayExperiment
Language: R - Size: 8.58 MB - Last synced at: 20 days ago - Pushed at: 3 months ago - Stars: 5 - Forks: 4
rachelgriffard/optima
An open-source R package for the Tapestri platform for integrative single cell multiomics data analysis
Language: HTML - Size: 763 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 5 - Forks: 0
muzafferarikan/gNOMO2
gNOMO2 allows integrated multi-omics analyses of microbiomes
Language: Python - Size: 1.32 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 5 - Forks: 1
inukj/MONTI
MONTI is a tool for analyzing large multi-omics cancer cohort data in association with clinical featuers
Language: Jupyter Notebook - Size: 164 MB - Last synced at: 6 days ago - Pushed at: about 1 year ago - Stars: 5 - Forks: 7
MoTrPAC/MotrpacRatTraining6mo
Analysis of the MoTrPAC endurance exercise training study in 6-month-old rats
Language: R - Size: 80.7 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 5 - Forks: 0
acabassi/klic
R package for KLIC: Kernel Learning Integrative Clustering
Language: R - Size: 22.4 MB - Last synced at: 16 days ago - Pushed at: almost 5 years ago - Stars: 5 - Forks: 3
burakcan-izmirli/DeepResponse
DeepResponse: Large Scale Prediction of Cancer Cell Line Drug Response with Deep Learning Based Pharmacogenomic Modelling
Language: Python - Size: 322 KB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 4 - Forks: 3
secrierlab/CancerG0Arrest
Evaluation of cell cycle arrest from transcriptomics data.
Language: R - Size: 187 MB - Last synced at: about 1 month ago - Pushed at: 11 months ago - Stars: 4 - Forks: 1
cantinilab/mowgli_reproducibility
Data and scripts to reproduce experiments for Mowgli.
Language: Python - Size: 336 MB - Last synced at: 29 days ago - Pushed at: about 1 year ago - Stars: 4 - Forks: 1
Shamir-Lab/INTEND
INTEND (IntegratioN of Transcriptomic and EpigeNomic Data), a novel algorithm for integrating gene expression and DNA methylation datasets covering disjoint sets of samples
Language: R - Size: 97.7 MB - Last synced at: almost 2 years ago - Pushed at: over 2 years ago - Stars: 4 - Forks: 0
SinaTabakhi/MAgentOmics
[EMBC 2022] Multi-agent Feature Selection for Integrative Multi-omics Analysis
Language: Jupyter Notebook - Size: 55.7 KB - Last synced at: about 1 month ago - Pushed at: over 2 years ago - Stars: 4 - Forks: 0
GSK-AI/image2omics
Accompanying code for Image2Omics
Language: Python - Size: 113 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 0
soumitag/multiSLIDE
Multi-omics Systems-Level Interactive Data Exploration (multiSLIDE)
Language: Java - Size: 525 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 3 - Forks: 1
himelmallick/TweedieLabs
Collection of walkthrough tutorials on how to use Tweedieverse for differential analysis of omics data.
Language: HTML - Size: 57.6 KB - Last synced at: about 1 year ago - Pushed at: about 3 years ago - Stars: 3 - Forks: 0
sdsc-ordes/modos-api
Python API to manage multi-omics digital objects
Language: Python - Size: 4.64 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 2 - Forks: 0
smdabdoub/awesome-rm-omics
List of software packages for repeated measures analysis in -omics data
Size: 170 KB - Last synced at: 6 days ago - Pushed at: 3 months ago - Stars: 2 - Forks: 0
EATRIS/motbx
EATRIS Multi-omics Toolbox
Language: Jupyter Notebook - Size: 553 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 2 - Forks: 0
pinellolab/simstpy
A framework for simulation of spatially-resolved omics data using python
Language: Jupyter Notebook - Size: 7.13 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 2 - Forks: 1
Huising-Lab/epiRomics
An R package designed to integrate and visualize various levels of epigenomic information, including but not limited to: ChIP, Histone, ATAC, and RNA sequencing. epiRomics is also designed to identify enhancer and enhanceosome regions from these data.
Language: HTML - Size: 32.6 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 2
Karenxzr/MultiNEP
MultiNEP: a Multi-omics Network Enhancement framework for Prioritizing disease genes and metabolites simultanuously
Language: R - Size: 8.02 MB - Last synced at: 4 months ago - Pushed at: almost 2 years ago - Stars: 2 - Forks: 0
lorenzoFabbri/paper-helix-multiOmics
PhD paper #1
Language: Rich Text Format - Size: 53.3 MB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 2 - Forks: 0
PMBio/mudatasets
Multimodal datasets, in MuData format
Language: Python - Size: 66.4 KB - Last synced at: 28 days ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 1
vniems/BD-Lithium
A collection of source codes for network-based multi-omics analysis using integrated genome-wide association studies (GWAS) and transcriptomic data to identify genetic contribution into lithium response in patients with bipolar disorder (BD).
Language: HTML - Size: 1.54 MB - Last synced at: about 1 month ago - Pushed at: almost 3 years ago - Stars: 2 - Forks: 1
climatechangemicrobiology/ProGRN
Prokaryote Gene Regulatory Network (ProGRN) Inference Pipeline
Language: HTML - Size: 238 KB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 1 - Forks: 0
zhizuio/survomics Fork of ocbe-uio/survomics
Tutorial on survival modelling with omics data
Language: TeX - Size: 16.5 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 1 - Forks: 0
tklammsteiner/tklammsteiner.github.io
Personal website
Language: JavaScript - Size: 222 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 1 - Forks: 0
HUBioDataLab/DeepResponse Fork of burakcan-izmirli/DeepResponse
DeepResponse: Large Scale Prediction of Cancer Cell Line Drug Response with Deep Learning Based Pharmacogenomic Modelling
Language: Python - Size: 322 KB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 1 - Forks: 2
tmichoel/BioFindr.jl
Fast Inference of Biological Networks from Directed Regulations (Findr) in Julia
Language: Julia - Size: 1.74 MB - Last synced at: 28 days ago - Pushed at: 10 months ago - Stars: 1 - Forks: 0
MoTrPAC/MotrpacRatTraining6moWATData
Data and analysis results for the MoTrPAC PASS1B rat white adipose tissue manuscript
Language: R - Size: 268 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0
Yunfan-Li/scBridge
Code for the paper "scBridge embraces cell heterogeneity in single-cell RNA-seq and ATAC-seq data integration"
Language: Python - Size: 48 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0
Maximvan/AHTAOmicsAnalysisPCOS
Identification for Key Pathways and Genes in Polycystic Ovary Syndrome (PCOS) using a multi-omics approach, as part of the Applied High Throughput Analysis course at Ghent University
Size: 24.1 MB - Last synced at: 8 months ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0
vadimnazarov/tcr-specificity
T-cell receptor specificity prediction using Deep Learning
Language: Jupyter Notebook - Size: 5.87 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 1 - Forks: 0
krisrs1128/stat992_s23
Course site for STAT 992 - Spring 2023 at UW Madison.
Language: CSS - Size: 5.76 MB - Last synced at: 11 months ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 0
LamineTourelab/NetICS-multi-omics
NetICS: network-based integration of multi-omics data for prioritizing cancer genes
Language: MATLAB - Size: 12.8 MB - Last synced at: 3 months ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 0
tonyliang19/spatial_classifier
Repo for testing multiple papers related to multi-omics
Language: Jupyter Notebook - Size: 1.51 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0
NKI-CCB/Percolate
Implementation of Percolate, an exponential family JIVE statistical model for multi-view integration
Language: Python - Size: 64.5 KB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0
YogiOnBioinformatics/Hidden-Markov-Model-based-Integration-of-Multi-Assay-Epigenomics-Samples
Integration of ATAC-Seq and multi-assay ChIP-Seq data using IDEAS (Hidden Markov Model) approach.Multi-Epigenomic state annotation with CHDI NeuroLINCS Epigenomics data using the tool "IDEAS"
Language: Jupyter Notebook - Size: 2.34 GB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0
ashleymaeconard/time2splice
Method to identify temporal and sex-specific alternative splicing from multi-omic data, specifically RNA-seq + (CUT&RUN or ChIP-seq).
Language: Shell - Size: 15 MB - Last synced at: 3 months ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 1
ramonreszat/bachelor-thesis
Multi-omics data integration
Language: Jupyter Notebook - Size: 20 MB - Last synced at: almost 2 years ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 0
Fjeanneret/multiSight
:bar_chart: :clipboard: Bioconductor R package with Graphical Interface to handle multi-omic data by Classification, Enrichment and Network inference.
Language: R - Size: 3.64 MB - Last synced at: over 1 year ago - Pushed at: about 3 years ago - Stars: 1 - Forks: 1
bhi-kimlab/neticspy
Python implementation of NetICS (Network-based Integration of Multi-omics data).
Language: Python - Size: 137 KB - Last synced at: 19 days ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 1
nlawlor/Multiomic_Browser
An R shiny application for visualization of EndoC-bH1 and human islet genomic data
Language: R - Size: 18 MB - Last synced at: about 1 year ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 1
bioinfodlsu/regulated-cell-death-playground
Collection of analysis scripts and notebooks related to regulated cell death
Language: HTML - Size: 91.6 MB - Last synced at: 9 days ago - Pushed at: 9 days ago - Stars: 0 - Forks: 0
Aridoge13/Kabosu
ML based AI tool for personalised medicine utilising multi-omics data
Language: Jupyter Notebook - Size: 94.7 KB - Last synced at: 15 days ago - Pushed at: 15 days ago - Stars: 0 - Forks: 0
jarnokoetsier/OrganoidAnalysis
Multi-Omics Characterization of Developing Forebrain Organoids Unravels the Dynamic Molecular Events of Rett Syndrome Pathogenesis
Language: R - Size: 4.35 MB - Last synced at: 19 days ago - Pushed at: 19 days ago - Stars: 0 - Forks: 1
cbil-vt/iDDN
Multi-omics differential dependency network inference
Language: Python - Size: 2.78 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 0 - Forks: 0
vivekruhela/BRAINscape
An R package to visualize eQTL and DESeq2 analysis results through an interactive Shiny app for Hispanics and Non-Hispanics White (NHW) in MU-BRAINS dataset.
Language: R - Size: 169 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0
kris96tian/simulator_app_multi_omics
Simulate and download multi-omics datasets, by selecting omics types, sample sizes, and other parameters.
Language: Python - Size: 4.88 KB - Last synced at: 12 days ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0
kris96tian/MULTI_OMICS_Integration
Hands-on experience in integrating and analyzing multi-omics data,using advanced bioinformatics tools to derive meaningful insights
Language: Jupyter Notebook - Size: 2.08 MB - Last synced at: 12 days ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0
pipaber/Multi-omics
This is a repository to show my experience analyzing different kinds of Omics data.
Language: JavaScript - Size: 5.46 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0
GeneLab-AWG/GeneLab_AWGs
Official repository for GeneLab AWGs
Language: R - Size: 42.1 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 2
emosca-cnr/mND
mND uses multi-layer Network Diffusion to find gene networks that contain high scoring genes. It considers two or more "layers" of genome-wide scores and an interactome.
Language: R - Size: 26.6 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0
arriagajorge/Lung-cancer-multiomics
a multiomics approach on lung cancer (lung subtypes approach in https://github.com/arriagajorge/Lung-Cancer-Multi-Omics-subtype)
Language: R - Size: 38.7 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
tyronechen/SARS-CoV-2
This is now the main repository. A few older issues are still tracked on gitlab for reference.
Language: Jupyter Notebook - Size: 184 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 1
TaeWooJung/root-niche-multiomics-project
Multi-omics Analysis on Arabidopsis Root Stem Cell Niche
Size: 2.6 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
nicholas-owen/crb_omics_manuscript
Code for the crb2a multi omics manuscript
Language: R - Size: 310 MB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0
vadimnazarov/adversarial-mhc
Adversarial autoencoders for MHCI epitope and immunogenicity prediction
Language: Jupyter Notebook - Size: 51.2 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0
BiGCAT-UM/Transcriptomics_Metabolomics_Analysis_Rshiny
R Shiny application for the multi-omics analysis of inflammatory bowel disease
Language: R - Size: 97.8 MB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
Vogel-lab/Integrative-multi-omics-analyses-of-FOXG1-functions
The documented analysis of the results reported in Akol et al., 2023 as R markdowns, Galaxy histories and jupyter logs..
Language: HTML - Size: 229 MB - Last synced at: almost 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
