moiexpositoalonsolab/grenepipe

A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles - for sampled individuals, and for pool sequencing.

Language: Python - Size: 100 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 96 - Forks: 22

felixleopoldo/benchpress

Scalable open-source software to run, develop, and benchmark causal discovery algorithms

Language: Python - Size: 123 MB - Last synced at: 8 days ago - Pushed at: 8 days ago - Stars: 69 - Forks: 19

4dn-dcic/tibanna

Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.

Language: Python - Size: 134 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 69 - Forks: 27

lachlandeer/snakemake-econ-r

reproducible research project template for R using Renv and snakemake with an econ application

Language: R - Size: 886 KB - Last synced at: almost 2 years ago - Pushed at: about 3 years ago - Stars: 50 - Forks: 12

centrefornetzero/pypsa-fes

A model that optimises investment and operation, and incorporates flexibility domestic demand flexibility to model scenarios for Great Britain's future energy system.

Language: Python - Size: 99.2 MB - Last synced at: 6 days ago - Pushed at: 5 months ago - Stars: 24 - Forks: 0

metagenlab/MeSS

Snakemake pipeline for simulating shotgun metagenomic samples

Language: Python - Size: 5.95 MB - Last synced at: 11 days ago - Pushed at: 11 days ago - Stars: 23 - Forks: 3

laelbarlow/amoebae

Workflow for identifying and classifying homologous gene/protein sequences

Language: Python - Size: 7.72 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 20 - Forks: 2

s-shemmee/s-shemmee

Config files for my GitHub profile.

Size: 2.7 MB - Last synced at: about 6 hours ago - Pushed at: about 7 hours ago - Stars: 19 - Forks: 10

sanjaynagi/rna-seq-pop

Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data

Language: Jupyter Notebook - Size: 99.5 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 18 - Forks: 9

guigolab/LyRic

Long RNA-seq analysis workflow

Language: Python - Size: 76.3 MB - Last synced at: 4 days ago - Pushed at: 6 months ago - Stars: 18 - Forks: 4

ylab-hi/ScanNeo2

Snakemake-based computational workflow for neoantigen prediction from diverse sources

Language: Python - Size: 37.8 MB - Last synced at: 10 days ago - Pushed at: 2 months ago - Stars: 14 - Forks: 1

NovembreLab/eems-around-the-world

Repo to analyze population genetic data with many different methods

Language: R - Size: 9.92 MB - Last synced at: about 1 year ago - Pushed at: over 5 years ago - Stars: 14 - Forks: 8

fritzbayer/snakemake-with-R

Simple template for running snakemake with R

Language: R - Size: 35.2 KB - Last synced at: about 2 months ago - Pushed at: over 2 years ago - Stars: 11 - Forks: 1

ImagoXV/NanoASV

NanoASV official repo

Language: Shell - Size: 86.4 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 9 - Forks: 3

Serka-M/mmlong2-lite

Lightweight bioinformatics pipeline for microbial genome recovery

Language: Python - Size: 1.18 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 9 - Forks: 3

RIVM-bioinformatics/ViroConstrictor

ViroConstrictor is a pipeline designed to process raw FastQ data from viral amplicon-based sequencing and generate biologically correct consensus sequences of the given viral genome

Language: Python - Size: 3.59 MB - Last synced at: 13 days ago - Pushed at: 13 days ago - Stars: 6 - Forks: 2

fischuu/Pipeline-Holoruminant-Meta

Easy to use Snakemake metagenomic pipeline that covers a) read-based analysis b) contig based analysis and c) MAG assembly and annotation using a broad set of ready to use and included public databases and annotators

Language: HTML - Size: 23.9 MB - Last synced at: 30 days ago - Pushed at: 30 days ago - Stars: 6 - Forks: 0

niekwit/crispr-screens

Snakemake workflow for CRISPR-Cas9 screen analysis

Language: Python - Size: 35.3 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 6 - Forks: 1

RIVM-bioinformatics/SARS2seq

SARS2seq is a pipeline designed to process raw FastQ data from targeted SARS-CoV-2 sequencing and generate biologically correct consensus sequences of the SARS-CoV-2 genome.

Language: Python - Size: 1.41 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 6 - Forks: 0

mjmlab/pyinseq

Python pipeline for analyzing INSeq Insertion Sequencing data

Language: Python - Size: 111 MB - Last synced at: 12 days ago - Pushed at: about 3 years ago - Stars: 6 - Forks: 6

dohlee/snakemake-hamburger

:snake::hamburger: A beginner's guide to modular snakemake workflows.

Language: Python - Size: 73.2 KB - Last synced at: about 1 month ago - Pushed at: almost 7 years ago - Stars: 6 - Forks: 1

EchoSingh/EchoSingh

This repository serves as the foundation of my GitHub profile README, highlighting my projects, technical skills, and professional journey. It provides an overview of my contributions to open-source, personal projects, and areas of interest, while also reflecting my commitment to continuous learning and innovation.

Size: 14.6 MB - Last synced at: about 1 hour ago - Pushed at: about 2 hours ago - Stars: 5 - Forks: 3

niekwit/rna-seq-salmon-deseq2

Snakemake workflow for RNA-Seq differential transcript analysis using Salmon/Deseq2

Language: Python - Size: 317 MB - Last synced at: 25 days ago - Pushed at: 25 days ago - Stars: 5 - Forks: 0

allytrope/variant-analysis

A Snakemake pipeline for variant calling of genomic FASTQ data using GATK

Language: Jupyter Notebook - Size: 4.39 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 5 - Forks: 0

chazeon/dpgen-snakemake

A lightweight Snakemake-based workflow that implements the DP-GEN scheme.

Language: Python - Size: 13 MB - Last synced at: 2 months ago - Pushed at: over 2 years ago - Stars: 5 - Forks: 0

svsuresh/salmon_deseq2_snakemake

This repository has snakemake scripts for salmon-deseq2 pipeline for RNAseq data analysis

Language: R - Size: 20.5 KB - Last synced at: over 1 year ago - Pushed at: about 7 years ago - Stars: 5 - Forks: 0

niekwit/damid-seq

DamMapper: Snakemake workflow for DamID-Seq analysis

Language: Python - Size: 83.2 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 4 - Forks: 0

open2c/distiller-sm

a Snakemake version of distiller - the Open2C Hi-C mapping workflow

Language: Python - Size: 131 KB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 4 - Forks: 3

Zhanglab-IOZ/TnpB

Snakemake workflows for TAM depletion analysis and de novo IS605 annotation

Language: Python - Size: 36.1 KB - Last synced at: about 2 months ago - Pushed at: 7 months ago - Stars: 4 - Forks: 3

fungenomics/scCoAnnotate Fork of HusseinLakkis01/scCoAnnotate

Pipeline for consensus prediction of cell types in single-cell RNA sequencing data.

Language: R - Size: 927 KB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 4 - Forks: 0

pyc1216/hlaloh-pipeline

hla-typing by optitype & polysolver , detect loh by lohhla.

Language: R - Size: 6.39 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 4 - Forks: 1

vibaotram/baseDmux

snakemake workflow for basecalling and demultiplexing of ONT sequencing data

Language: Python - Size: 84.2 MB - Last synced at: almost 2 years ago - Pushed at: about 2 years ago - Stars: 4 - Forks: 1

thomasbtf/document-anonymization

Personal data redaction on images based on FHIR patient resources.

Language: Python - Size: 4.1 MB - Last synced at: about 1 year ago - Pushed at: almost 4 years ago - Stars: 4 - Forks: 0

deepalivasoya/Snakemake-food

Language: Python - Size: 16.6 MB - Last synced at: about 2 years ago - Pushed at: almost 5 years ago - Stars: 4 - Forks: 1

weigelworld/auto-asm

snakemake long read assembly pipeline

Language: Python - Size: 43 KB - Last synced at: almost 2 years ago - Pushed at: almost 6 years ago - Stars: 4 - Forks: 4

ntnn19/AlphaFold3_workflow

A Snakemake workflow for high-throughput AlphaFold 3 structure predictions

Language: Python - Size: 266 KB - Last synced at: 18 days ago - Pushed at: 18 days ago - Stars: 3 - Forks: 0

Nirmal2310/ANOMALY

Snakemake workflow for calling NUMTs from Long read sequencing data. The pipeline takes either FASTQ or BAM file and outputs a text file containing NUMTs.

Language: Shell - Size: 5.53 MB - Last synced at: 25 days ago - Pushed at: 25 days ago - Stars: 3 - Forks: 0

niekwit/rna-seq-star-tetranscripts

Snakemake workflow for transposable element RNA-Seq using TEtranscripts

Language: R - Size: 95.3 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 3 - Forks: 0

hivlab/discover-virome

discover-virome: identify and quantify viruses from metagenomic assemblies

Language: Python - Size: 13 MB - Last synced at: over 2 years ago - Pushed at: over 3 years ago - Stars: 3 - Forks: 1

zavolanlab/SCUREL

Method to detect 3'UTR changes from scRNA-seq

Language: Python - Size: 30.7 MB - Last synced at: about 1 year ago - Pushed at: over 3 years ago - Stars: 3 - Forks: 1

lachlandeer/angrist-krueger-1991

a small exercise using Angrist & Krueger's 1991 data in a reproducible workflow

Language: R - Size: 106 KB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 3 - Forks: 1

gustaveroussy/rna-count-kallisto

Estimate fastq-formatted read abundace in RNA-Seq analysis with Kallisto

Language: Python - Size: 1.1 MB - Last synced at: 3 days ago - Pushed at: almost 6 years ago - Stars: 3 - Forks: 3

trangle1302/2D_shapespace

Language: Jupyter Notebook - Size: 49.8 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 2 - Forks: 0

akbaritabar/Internal-and-international-migration-of-scientists

Scripts, data, and replication materials for "Global subnational estimates of migration of scientists reveal large disparities in internal and international flows"

Language: HTML - Size: 1.17 GB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 2 - Forks: 0

ctglab/isoworm

A Snakemake pipeline developed to quantify isoforms expression levels in large RNA-seq datasets and find poly-A sites

Language: Python - Size: 95.1 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 2 - Forks: 0

IRI-UW-Bioinformatics/flu-ngs

NGS pipeline for influenza virus libraries

Language: Python - Size: 135 KB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 2 - Forks: 0

seqscope/NovaScope

The pipeline to process Novaseq dataset, from fastq to nge.

Language: Python - Size: 52.9 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 2 - Forks: 0

AngryMaciek/warlock

Warlock is a snakemake workflow to spawn multiple demons (deme-based oncology models) as jobs running around on a cluster environment 😈😈

Language: Python - Size: 284 KB - Last synced at: 6 months ago - Pushed at: 11 months ago - Stars: 2 - Forks: 0

bedapub/HBVouroboros

HBVouroboros automates sequencing-based HBV genotyping and expression profiling

Language: Python - Size: 23.6 MB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 2 - Forks: 1

insilicoconsulting/snake-chic

Snakemake wrapper around the Arima Capture Hi-C (CHiC) workflow

Language: Python - Size: 8.79 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 0

bcgsc/IMPALA

Integrated Mapping and Profiling of Allelically-expressed Loci with Annotations

Language: R - Size: 20 MB - Last synced at: 4 months ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 0

suqingdong/FastMitoAssembler

Fast Assembler Workflow for MitoGenome

Language: Python - Size: 67.4 KB - Last synced at: 6 days ago - Pushed at: about 2 years ago - Stars: 2 - Forks: 0

hivlab/sarscov2-variation

SARS-CoV-2 sequencing workflow

Language: Python - Size: 2.39 MB - Last synced at: over 2 years ago - Pushed at: over 3 years ago - Stars: 2 - Forks: 0

hivlab/ena-upload

Snakemake workflow to upload Sars-Cov-2 reads to ENA

Language: Python - Size: 214 KB - Last synced at: over 2 years ago - Pushed at: about 4 years ago - Stars: 2 - Forks: 0

tucca-cellag/tucca-rna-seq

Tufts University Center for Cellular Agriculture's RNA-Seq Workflow for Cellular Agriculture Projects

Language: Python - Size: 26.1 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 1 - Forks: 0

MPUSP/snakemake-ont-basecalling

A Snakemake workflow for basecalling and demultiplexing of Oxford Nanopore data using Dorado.

Language: Python - Size: 254 KB - Last synced at: 4 days ago - Pushed at: 5 days ago - Stars: 1 - Forks: 0

WissalManseri/WissalManseri

🦄 This repository contains all the best practices about GitHub

Size: 121 KB - Last synced at: 6 days ago - Pushed at: 7 days ago - Stars: 1 - Forks: 0

sanjaynagi/AmpSeeker

A snakemake workflow for amplicon sequencing

Language: Jupyter Notebook - Size: 108 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 1 - Forks: 3

ctubbs750/snakemake-genome-bottle

Snakemake workflow to install reference genomes and their supporting files

Language: Python - Size: 43.9 KB - Last synced at: about 1 month ago - Pushed at: about 2 months ago - Stars: 1 - Forks: 0

tdayris/fair_gatk_mutect2

Snakemake workflow used to call germline and/or somatic variants with GATK Mutect2

Language: Python - Size: 178 KB - Last synced at: about 2 months ago - Pushed at: 3 months ago - Stars: 1 - Forks: 1

elbecerrasoto/variants

Variant Calling Snakemake Pipeline

Language: Python - Size: 391 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 1 - Forks: 0

ThibaultLatrille/SelCoeff

Estimating the proportion of beneficial mutations that are not adaptive in mammals

Language: TeX - Size: 15.3 MB - Last synced at: about 2 months ago - Pushed at: 5 months ago - Stars: 1 - Forks: 0

Moha-cm/AutoRNASeq

Simplified RNA-Seq Insights with automation

Language: HTML - Size: 4.61 MB - Last synced at: about 2 months ago - Pushed at: 8 months ago - Stars: 1 - Forks: 1

ThibaultLatrille/MicMac

Detecting diversifying selection for a trait from within and between-species genotypes and phenotypes

Language: C++ - Size: 18.8 MB - Last synced at: 2 months ago - Pushed at: 9 months ago - Stars: 1 - Forks: 0

svsuresh/tuxedo2_snakemake

Language: R - Size: 192 KB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 1 - Forks: 0

niekwit/cut_and_run

Snakemake workflow for Cut & Run

Language: Python - Size: 72.4 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0

AU-ENVS-Bioinformatics/TotalRNA-Snakemake

A pipeline for TotalRNA analysis

Language: Jupyter Notebook - Size: 539 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 1

kybuivan/kybuivan

Config files for my GitHub profile.

Size: 7.25 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

kzkedzierska/atac

ATAC-seq snakemake pipeline

Language: Python - Size: 132 KB - Last synced at: 3 months ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 0

Pinky-cloud224/snakemake_workflow_rna_seq_data_analysis

Language: Jupyter Notebook - Size: 975 KB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0

emleddin/md-analysis-workflow

A Snakemake workflow for analyzing AMBER molecular dynamics simulations.

Language: Python - Size: 377 KB - Last synced at: about 2 years ago - Pushed at: about 4 years ago - Stars: 1 - Forks: 0

andnischneider/its_workflow

Repository to process ITS amplicon sequencing data and produce figures for Schneider et al (2021)

Language: R - Size: 2.53 MB - Last synced at: 11 months ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 3

datasnakes/orthoevol-snakemake

A snakemake workflow for the OrthoEvol python package.

Language: Python - Size: 11.7 KB - Last synced at: 3 months ago - Pushed at: almost 6 years ago - Stars: 1 - Forks: 0

0xEtherPunk/0xEtherPunk

My GitHub profile README with contribution statistics and activity visualization.

Size: 62.5 KB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 0 - Forks: 0

niekwit/gps-orfeome

Snakemake workflow for GPS-ORFeome screens

Language: Python - Size: 92.2 MB - Last synced at: 5 days ago - Pushed at: 6 days ago - Stars: 0 - Forks: 0

MPUSP/snakemake-workflow-template Fork of snakemake-workflows/snakemake-workflow-template

A template for standard compliant snakemake-workflows

Language: Python - Size: 65.4 KB - Last synced at: 12 days ago - Pushed at: 12 days ago - Stars: 0 - Forks: 1

meeranhussain/Population_genomic_analysis

A repository for efficient population genomic analysis using Snakemake workflow.

Language: R - Size: 919 KB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 0 - Forks: 0

varunchakrakodi/genome_alignment

Snakemake file for handling concatenated Illumina .fastq.gz files to generate aligned sequence

Language: Python - Size: 48.8 KB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 0 - Forks: 0

Swart-lab/loxodes-nucleosomes-workflow

Language: Jupyter Notebook - Size: 777 KB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 0 - Forks: 0

tdayris/fair_bowtie2_mapping

Align reads over a reference genome, filter aligned-reads, and mark duplicates

Language: Python - Size: 5.91 MB - Last synced at: about 2 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

tdayris/fair_macs2_calling

Snakemake workflow used to call peaks with Macs2

Language: Python - Size: 3.42 MB - Last synced at: about 2 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

tdayris/fair_genome_indexer

Download and index Ensembl sequences and annotations, remove non-canonical chromosimes, remove low TSL, index with multiple tools

Language: Python - Size: 1.16 MB - Last synced at: about 2 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

hoomanhanaei/RNAseq_DataAanalysis

RNA Sequencing Data Analysis: A 2025 Review and Updated Snakemake Pipeline

Language: Python - Size: 21.5 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

YunanJeong/ftp-to-s3

Language: Python - Size: 41 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

ruppinlab/tcga-wgs-kraken-microbial-quant

Kraken2 + Bracken based pipeline for classifying and quantifying microbial reads from GDC TCGA WGS data

Language: Python - Size: 21.7 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 1

kristinassong/RNAseq

A Snakemake pipeline to analyze RNA-seq expression data

Language: Python - Size: 117 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

tdayris/fair_rnaseq_salmon_quant

Snakemake workflow designed to perform RNASeq transcrpotime expression estimation with Salmon

Language: Python - Size: 183 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

rgomez-AI/CellOrientation

Test of Uniformity for centrosome orientation at early timepoints during Wound Healing Assay

Language: R - Size: 929 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

CCBR/CCBR_circRNA_AmpliconSeq

Snakemake workflow to process circRNA AmpliconSeq datasets generated to study circRNAs in KSHV and human hosts using divergent primers.

Language: Shell - Size: 480 KB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 1

rgomez-AI/3DChromTrans

Measure distances between two types of markers during FISH Assay after Chromosomal Translocation event

Language: Python - Size: 1.04 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0

Swart-lab/loxodes-bleties-workflow

Language: Jupyter Notebook - Size: 366 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

meeranhussain/RNASeq_Deseq2_Snakemake

Differential gene expression analysis for samples with replicates using STAR-DeSeq2 pipeline

Language: R - Size: 46.9 KB - Last synced at: 3 months ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

JuanCarlosBio/TFM

END OF MASTER'S PROJECT: Valencian International University VIU

Language: Jupyter Notebook - Size: 41.1 MB - Last synced at: 12 months ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

pooranibcbb/virome-pipeline

This is a pipeline for exploring viruses (ssDNA, dsDNA phage, and giant DNA viruses) and viral diversity in metagenomes.

Language: Python - Size: 79.1 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

simon-bt/sm-rnaseq-splicing

Snakemake pipeline for alternative slicing analysis with VAST-TOOLS

Language: Python - Size: 17.6 KB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

meeranhussain/RNASeq_DEGseq_Snakemake_NO-REPLICATES

Workflow for differential gene expression analysis for non-replicate samples using DEGseq

Language: R - Size: 20.5 KB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

liao961120/minimal-snake

An enhanced template structure for Snakemake

Language: HTML - Size: 422 KB - Last synced at: 3 days ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

AbdelrahmanYahia/wes_gatk

Whole exome sequencing snakemake workflow based on GATK best practice

Language: Jupyter Notebook - Size: 23.1 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 1

AbdelrahmanYahia/GUAP_toolkit

Genomics unit analysis pipelines toolkit: a collection of NGS workflows writtin in python3 and snakemake

Language: Python - Size: 1.83 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

lightning-auriga/statgen-mi

multiple imputation for association studies

Language: Python - Size: 10.9 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0