Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub / thelovelab / fishpond
Differential expression and allelic analysis, nonparametric statistics
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/thelovelab%2Ffishpond
Stars: 24
Forks: 9
Open Issues: 1
License: None
Language: R
Repo Size: 7.01 MB
Dependencies:
41
Created: over 5 years ago
Updated: about 2 months ago
Last pushed: 9 months ago
Last synced: 8 days ago
Topics: bioconductor, gene-expression, genomics, rnaseq, salmon, scrnaseq, statistics, transcriptomics
Files
Loading...
Readme
Loading...
Dependencies
DESCRIPTION
cran
- GenomicRanges * imports
- IRanges * imports
- Matrix * imports
- S4Vectors * imports
- SingleCellExperiment * imports
- SummarizedExperiment * imports
- abind * imports
- graphics * imports
- gtools * imports
- jsonlite * imports
- matrixStats * imports
- methods * imports
- qvalue * imports
- stats * imports
- svMisc * imports
- utils * imports
- AnnotationDbi * suggests
- DESeq2 * suggests
- EnsDb.Hsapiens.v86 * suggests
- GenomeInfoDb * suggests
- GenomicFeatures * suggests
- Gviz * suggests
- apeglm * suggests
- data.table * suggests
- ensembldb * suggests
- knitr * suggests
- limma * suggests
- macrophage * suggests
- org.Hs.eg.db * suggests
- pheatmap * suggests
- rmarkdown * suggests
- samr * suggests
- testthat * suggests
- tximeta * suggests
- tximportData * suggests
.github/workflows/check-bioc.yml
actions
- actions/cache v2 composite
- actions/checkout v2 composite
- actions/upload-artifact master composite
- docker/build-push-action v1 composite
- r-lib/actions/setup-pandoc v2 composite
- r-lib/actions/setup-r v2 composite