Topic: "galaxy-project"
refinery-platform/refinery-platform
The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. The platforms consists of three major components: a data repository with rich metadata capabilities, a workflow engine based on the popular Galaxy system, and visualization tools to support the exploration and interpretation of results at all stages of the analysis process.
Language: Python - Size: 124 MB - Last synced at: 9 months ago - Pushed at: over 2 years ago - Stars: 102 - Forks: 24
workflow4metabolomics/tools-metabolomics
Galaxy tools for metabolomics maintained by Workflow4Metabolomics
Language: R - Size: 1.66 GB - Last synced at: 11 days ago - Pushed at: 11 days ago - Stars: 27 - Forks: 28
C3BI-pasteur-fr/ngphylogeny-django
Language: HTML - Size: 6.86 MB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 27 - Forks: 22
galaxyproject/galaxy-language-server
Galaxy Language Server to help in Galaxy (https://galaxyproject.org/) tool wrappers development.
Language: Python - Size: 7.04 MB - Last synced at: 9 days ago - Pushed at: about 1 month ago - Stars: 23 - Forks: 15
galaxyproject/gxadmin
Handy command line utility for Galaxy administrators :rocket:
Language: Shell - Size: 1.66 MB - Last synced at: about 1 month ago - Pushed at: 3 months ago - Stars: 23 - Forks: 29
TailorDev/galaxy-tourbuilder 📦
🔝 The amazing Galaxy Tour Builder web extension. // See demo 👉
Language: JavaScript - Size: 11.7 MB - Last synced at: about 6 hours ago - Pushed at: almost 5 years ago - Stars: 17 - Forks: 7
workflow4metabolomics/workflow4metabolomics
Workflow4Metabolomics meta repository
Language: HTML - Size: 12.6 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 10 - Forks: 4
crs4/Galaxy4Developers
Training Course on Galaxy for Bioinformatics tool developers
Language: CSS - Size: 27.5 MB - Last synced at: almost 2 years ago - Pushed at: over 7 years ago - Stars: 7 - Forks: 1
fredericlemoine/golaxy
golaxy : interacting with Galaxy in Go
Language: Go - Size: 65.4 KB - Last synced at: almost 2 years ago - Pushed at: about 2 years ago - Stars: 5 - Forks: 0
workflow4metabolomics/w4m-docker
Docker for Workflow4Metabolomics Galaxy platform.
Language: Dockerfile - Size: 8.98 MB - Last synced at: about 1 year ago - Pushed at: almost 6 years ago - Stars: 5 - Forks: 6
JoelRomero97/Sistemas-Digitales
Implementaciones para diseño de sistemas digitales, comenzando por Flip Flops, registros, autómatas (Máquinas de Moore y Máquinas de Mealy), memorias ROM y sensores de presencia, utilizando para cada uno de estos, distintos contadores (anillo, década, etc).
Language: VHDL - Size: 4.22 MB - Last synced at: about 2 years ago - Pushed at: almost 8 years ago - Stars: 5 - Forks: 1
cumbof/galaxy-scraper-extension 📦
Chrome extension that automatically scrape and send data from a webpage to the current history of a Galaxy instance.
Language: JavaScript - Size: 703 KB - Last synced at: about 2 months ago - Pushed at: over 7 years ago - Stars: 4 - Forks: 1
ShahramShakiba/GalaxyGenerator-p07
Galaxy Generator ⁞|⁞ This project is a Galaxy Generator that leverages the magic of particle manipulation! ⁞|⁞ ⚪Three.js
Language: JavaScript - Size: 1.24 MB - Last synced at: 3 months ago - Pushed at: 11 months ago - Stars: 3 - Forks: 0
COMBAT-TB/irida-galaxy-deploy
:whale: Deploying IRIDA and Galaxy all in one server/VM using Docker or Terraform
Language: HTML - Size: 492 KB - Last synced at: about 1 month ago - Pushed at: almost 3 years ago - Stars: 3 - Forks: 4
mirsakhawathossain/Milky-Way-Mapping
Mapping the Milky Way is a galactic mapping at 21 cm Hydrogen spectrum.
Language: Matlab - Size: 21.7 MB - Last synced at: 12 months ago - Pushed at: about 7 years ago - Stars: 3 - Forks: 1
COMBAT-TB/tbvcfreport
Generate an interactive HTML-based report from M.tb SnpEff annotated VCF(s)
Language: Python - Size: 1.34 MB - Last synced at: about 2 months ago - Pushed at: 12 months ago - Stars: 2 - Forks: 2
tripal/tripal_galaxy
This module is for integration of Tripal and a remote Galaxy Instance.
Language: PHP - Size: 5.63 MB - Last synced at: about 2 months ago - Pushed at: about 2 years ago - Stars: 2 - Forks: 4
anuprulez/galaxy_tool_recommendation
Galaxy tool recommendation
Language: Jupyter Notebook - Size: 942 MB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 2 - Forks: 3
ndopj/tesp-api
An Open-source implementation of a task execution engine based on the TES standard distributing executions to services exposing Pulsar application.
Language: Python - Size: 74.2 KB - Last synced at: about 2 years ago - Pushed at: about 3 years ago - Stars: 2 - Forks: 2
vy-phung/genomic-data-science-project-about-fetus-and-adult
My personal genomic data science project
Language: Jupyter Notebook - Size: 15.8 MB - Last synced at: about 1 year ago - Pushed at: over 3 years ago - Stars: 2 - Forks: 0
anuprulez/similar_galaxy_tools
Finding similarity in Galaxy tools
Language: Python - Size: 1.33 GB - Last synced at: about 2 years ago - Pushed at: almost 7 years ago - Stars: 2 - Forks: 1
ELIXIR-IIB-training/Galaxy
Language: CSS - Size: 19.1 MB - Last synced at: about 1 year ago - Pushed at: over 8 years ago - Stars: 2 - Forks: 1
IPK-BIT/blast2galaxy
A Python package providing a CLI and API to perform BLAST+ and DIAMOND queries against public or private Galaxy servers
Language: Python - Size: 706 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 1 - Forks: 0
Amit-H/Mining-for-microbes
Reusing publicly available whole transcriptome data to determine the state of the microbiome at time of sampling.
Size: 1000 Bytes - Last synced at: almost 2 years ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0
destairdenbi/galaxy-workflow-generator Fork of bgruening/docker-galaxy-ngs-preprocessing
:whale::bar_chart::books: Galaxy Docker image for assisted generation of RNA-Seq and BS-Seq workflows
Language: HTML - Size: 2.59 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 4
anuprulez/similar_galaxy_workflow
Predict tools in Galaxy workflow (directed graph)
Language: Jupyter Notebook - Size: 634 MB - Last synced at: about 2 years ago - Pushed at: over 5 years ago - Stars: 1 - Forks: 3
ybgirgin3/Space-Parallax
Part Of Space Animation
Language: CSS - Size: 138 KB - Last synced at: about 2 years ago - Pushed at: over 5 years ago - Stars: 1 - Forks: 0
workflow4metabolomics/camera.archive 📦
🚫 move to https://github.com/workflow4metabolomics/tools-metabolomics
Language: R - Size: 94.7 MB - Last synced at: about 1 year ago - Pushed at: almost 6 years ago - Stars: 1 - Forks: 1
nevencaplar/Main-Sequence-Variability
Code and data supporting paper: Stochastic modeling of star-formation histories I: the scatter of the star-forming main sequence (2019MNRAS.487.3845C)
Language: Jupyter Notebook - Size: 51.8 MB - Last synced at: about 2 years ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 0
domenico-somma/Papillon
A python module to read and plot Galaxy RNA-seq data
Language: Python - Size: 271 KB - Last synced at: 11 days ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 1
zemmali/ELK-Stack
Elastic Stack
Size: 6.84 KB - Last synced at: about 1 year ago - Pushed at: over 7 years ago - Stars: 1 - Forks: 0
m7amd777/NASA_GalaxyOD
This is a simple Flask-based web application that automatically detects galaxies in an uploaded image using a computer vision model via the Roboflow API.
Language: Python - Size: 2.17 MB - Last synced at: about 4 hours ago - Pushed at: about 5 hours ago - Stars: 0 - Forks: 0
brsynth/galaxytools
Galaxy wrappers of SynBioCAD tools suite
Language: HTML - Size: 40.3 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 0
Emmanuel-Howard/Galaxy-Invadors
A passion project building a galaxy arcade game
Language: Python - Size: 15 MB - Last synced at: 7 days ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0
usegalaxy-eu/pulsar-infrastructure-playbook
Language: Jinja - Size: 72.3 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 8
ARTbio/AnalyseGenome
A repository for the training material of the course "Analyse des Génomes"
Language: Shell - Size: 22 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0
Powerbounty/Galaxy-Simulation-AT3
Galaxy Simulation using ThreeJs library
Language: JavaScript - Size: 7.85 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0
combat-sars-cov-2/workbench-cli
Workbench-cli is a command-line shell and scripting interface for Galaxy, Irida and other various popular bioinformatics platforms, envisioned to be a Swiss Army knife designed to make life easier for those who love hacking away at the command prompt.
Language: Python - Size: 276 KB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 1
jayashree2699/Galaxy-Classification
Galaxy classification using Decision Tree and Random Forest Classifiers
Language: Python - Size: 131 KB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
H3X-C0DE/The-Dark-Galaxy
Group Assignment for Kodehode October.2022
Language: HTML - Size: 10.1 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 1
JazzEd-EdTech/biojava Fork of violethaze74/biojava
:book::microscope::coffee: BioJava is an open-source project dedicated to providing a Java library for processing biological data.
Size: 46.5 MB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
COMBAT-TB/combat-tb.github.io
COMBAT-TB Website
Language: CSS - Size: 14 MB - Last synced at: 3 months ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 2
erickaguirre96/DAP_Bokeh_View
Bokeh visualization for output DAP MUSE data cubes.
Language: Python - Size: 8.79 KB - Last synced at: about 1 year ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0
Pater999/UNITN-machine-learning-project-2021
Repository contente la mia soluzione al progetto dell'esame di Introduction To Machine Learning svolto nel 2021.
Language: Jupyter Notebook - Size: 10.4 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0
ADGSTUDIOS/GalaxyML
Data Mining and Virtual Observatory : Identifying galaxies, Quasars and stars in multi-Wavelength surveys.
Language: Jupyter Notebook - Size: 338 KB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 1
destairdenbi/galaxy-atoms
de.STAIR Galaxy atoms for assisted workflow generation of RNA-Seq and BS-Seq data analyses
Language: HTML - Size: 1.26 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 4
destairdenbi/training-material
Training material of every de.STAIR de.NBI training event, on-site support training, shared on-line videos and scripts
Language: HTML - Size: 606 MB - Last synced at: about 2 years ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 7
sumeetpalsingh/CIVIS_NGS
Hands-on course on RNA-Seq analysis
Size: 455 KB - Last synced at: 12 months ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0
maim228/star-wars
Language: CSS - Size: 2.49 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0
COMBAT-TB/irida-pipeline-plugins 📦
Galaxy pipelines as plugin for IRIDA intergration
Language: Java - Size: 7.43 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 1
bagnacan/destair-training-material Fork of destairdenbi/training-material
Training material of every de.STAIR de.NBI training event, on-site support training, shared on-line videos and scripts
Language: TeX - Size: 573 MB - Last synced at: about 2 years ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0
bagnacan/destair-galaxy-workflow-generator Fork of destairdenbi/galaxy-workflow-generator
:whale::bar_chart::books: Galaxy Docker image for assisted generation of RNA-Seq and BS-Seq workflows
Language: HTML - Size: 2.59 MB - Last synced at: about 2 years ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0
bilille/galaxy-mixomics-blocksplsda
Galaxy wrappers for the block.splsda, plotIndiv and plotVar functions from the mixOmics R package
Language: R - Size: 96.7 KB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0
torfinnnome/galaxy-admin-training-barcelona-2020
My Ansible training directories
Language: Shell - Size: 263 KB - Last synced at: 7 days ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0
SANBI-SA/galaxy-africa-website
The Galaxy Africa Website
Language: JavaScript - Size: 9.19 MB - Last synced at: about 2 years ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 4
COMBAT-TB/neo4j-galaxy-ie
:whale: Neo4j Galaxy IE
Language: Shell - Size: 8.55 MB - Last synced at: 3 months ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 2
elizabethlin6/analyzing-galactic-environments
My CSE 160 final project on analyzing galaxies and their characteristics.
Language: CSS - Size: 3.92 MB - Last synced at: almost 2 years ago - Pushed at: almost 6 years ago - Stars: 0 - Forks: 0
workflow4metabolomics/normalization
Normalization for Galaxy
Language: R - Size: 623 KB - Last synced at: about 1 year ago - Pushed at: almost 6 years ago - Stars: 0 - Forks: 0
workflow4metabolomics/probmetab
ProbMetab For Galaxy
Language: R - Size: 14.1 MB - Last synced at: about 1 year ago - Pushed at: about 6 years ago - Stars: 0 - Forks: 0
gmauro/ansible-galaxy-os Fork of galaxyproject/ansible-galaxy-os
An Ansible role is for configuring the base operating system useful for running Galaxy.
Size: 69.3 KB - Last synced at: about 1 year ago - Pushed at: about 6 years ago - Stars: 0 - Forks: 1
nucleosome-dynamics/nucleosome_dynamics_galaxy
Nucleosome Dynamics wrappers for Galaxy platform
Language: HTML - Size: 92.9 MB - Last synced at: over 1 year ago - Pushed at: about 6 years ago - Stars: 0 - Forks: 0
COMBAT-TB/combat-tb-gx-pipelines
Backup of Galaxy Pipelines
Size: 18.6 KB - Last synced at: 3 months ago - Pushed at: about 6 years ago - Stars: 0 - Forks: 0
gmauro/ansible-gx-extras
Ansible role to configure several production services as nginx, uwsgi and supervisor.
Language: HTML - Size: 43 KB - Last synced at: about 2 months ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 1
Minimel/CIL2018 Fork of lauramanduchi/CIL2018 📦
Galaxy Image Generation - Project for Computational Intelligence Lab (ETH Zurich, Spring 2018)
Language: Python - Size: 29.7 MB - Last synced at: 7 months ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 0
COMBAT-TB/vcf_snps_utils 📦
Custom command line utility tools to manipulate vcf files
Language: Python - Size: 12.7 MB - Last synced at: about 2 years ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 0
refinery-platform/split-paired-collection
A Galaxy: https://galaxyproject.org/ tool that takes an input Dataset Collection and returns two distinct outputs
Size: 8.79 KB - Last synced at: about 1 year ago - Pushed at: almost 7 years ago - Stars: 0 - Forks: 0
metamaden/seq_answers
Sequencing data preprocessing
Language: R - Size: 1.44 MB - Last synced at: about 1 year ago - Pushed at: almost 7 years ago - Stars: 0 - Forks: 0
zipho/orbit
Galaxy streamline web interface for dataset upload and metadata management
Size: 4.88 KB - Last synced at: over 1 year ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0
refinery-platform/clodius-galaxy
Galaxy tool wrapper around Clodius: https://github.com/hms-dbmi/clodius
Size: 292 KB - Last synced at: about 1 year ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0
SANBI-SA-archive/galaxy Fork of galaxyproject/galaxy 📦
SANBI Galaxy (Deployed into SANBI servers): Data intensive science for everyone.
Language: Python - Size: 233 MB - Last synced at: about 2 years ago - Pushed at: almost 8 years ago - Stars: 0 - Forks: 0
