gc-content | Topic | Ecosyste.ms: Repos

Topic: "gc-content"

showteeth/ggcoverage

Visualize and annotate genomic coverage with ggplot2

Language: R - Size: 33.8 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 244 - Forks: 20

BioinfoToolbox/fqkit

🦀 Fqkit: A simple and cross-platform program for fastq file manipulation

Language: Rust - Size: 7.09 MB - Last synced at: 16 days ago - Pushed at: 17 days ago - Stars: 6 - Forks: 3

manojmw/NetDNA-1.0

This is my python script for a simple web-based tool that will generate basic biological data from the query DNA sequence.

Language: Python - Size: 517 KB - Last synced at: over 2 years ago - Pushed at: over 3 years ago - Stars: 3 - Forks: 0

TomMakesThings/Genome-Sequence-Analysis-HMM

HMM for annotating coding regions of DNA in S. cerevisiae chromosome III

Language: Jupyter Notebook - Size: 1.32 MB - Last synced at: over 2 years ago - Pushed at: about 3 years ago - Stars: 2 - Forks: 0

danielfamiyeh/biothon

Biosequence analysis library

Language: Python - Size: 298 KB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 2 - Forks: 0

0xSumitBanik/Nucleic-Acid-Analysis

List of few tools to study DNA Sequences and various operations on it. This repo can be used to solve Problems of ROSALIND (Bioinformatics Stronghold Track).

Language: CSS - Size: 219 KB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 2 - Forks: 0

JKhetia/gc-content-sliding-window

Beginner-friendly Jupyter tool to compute GC% and sliding-window profiles for DNA sequences.

Language: Jupyter Notebook - Size: 2.09 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 1 - Forks: 0

fatmakahveci/Rosalind-Solutions

My solutions for rosalind problems

Language: Python - Size: 32.1 MB - Last synced at: over 2 years ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0

NikolasGialitsis/Bioinformatics

Solving Rosalind.com Problems and more

Language: Python - Size: 99.6 KB - Last synced at: about 2 years ago - Pushed at: almost 8 years ago - Stars: 1 - Forks: 0

sam217pa/prokgc

Computes gc contents in prokaryotic genomes

Language: C - Size: 2.73 MB - Last synced at: over 2 years ago - Pushed at: over 8 years ago - Stars: 1 - Forks: 0

stanuch/gc-content-analyzer

📊 Tool for analyzing GC content in DNA sequences with FASTA input and sliding window analysis.

Language: Python - Size: 15.6 KB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 0 - Forks: 0

nawaf-Alharthi/GC_Content_calculate

A simple Streamlit app to calculate DNA GC content 🧬

Language: Python - Size: 6.84 KB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 0 - Forks: 0

nawaf-Alharthi/gc-content-calculator

A simple Streamlit app to calculate DNA GC content 🧬

Language: Python - Size: 5.86 KB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 0 - Forks: 0

Code-JL/DNA-Sequence-Analyzer

A robust Python-based bioinformatics tool for comprehensive DNA sequence analysis and manipulation.

Language: Python - Size: 7.81 KB - Last synced at: 5 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

This project provides hands-on experience in DNA analysis using R, covering sequence manipulation, mutation analysis, GC content, fragment analysis, sequence alignment, RNA-seq, variant analysis, and phylogenetics.

Language: HTML - Size: 6.51 MB - Last synced at: 8 months ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

darwinsorchid/GC-Content-Calculator

[Python] Tool for calculating GC content of nucleotide sequences with optional sliding window analysis. Sequence input options include strings and the following file formats: FASTA, FASTA Nucleid Acid, GenBank, Aligned FASTA and ClustalW.

Language: Python - Size: 75.2 KB - Last synced at: about 2 months ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

dissipative/ribosome

The Ribosome package is a Go library designed for efficient transcription and translation of DNA and RNA sequences, inspired by the real processes in living cells.

Language: Go - Size: 71.3 KB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0