mixed-effects-models | Topic | Ecosyste.ms: Repos

Topic: "mixed-effects-models"

julianfaraway/rexamples

worked R examples

Language: Stan - Size: 21.2 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 113 - Forks: 20

drizopoulos/GLMMadaptive

GLMMs with adaptive Gaussian quadrature

Language: R - Size: 22.9 MB - Last synced at: 18 days ago - Pushed at: about 2 months ago - Stars: 60 - Forks: 14

PharmCat/Metida.jl

Julia package for fitting mixed-effects models with flexible random/repeated covariance structure.

Language: Julia - Size: 5.56 MB - Last synced at: 22 days ago - Pushed at: 3 months ago - Stars: 26 - Forks: 0

JuliaMixedModels/EmbraceUncertainty

The book "Embrace Uncertainty: Fitting Mixed-Effects Models with Julia"

Language: TeX - Size: 55.4 MB - Last synced at: 9 months ago - Pushed at: 10 months ago - Stars: 19 - Forks: 1

yjunechoe/jlmerclusterperm

Fast cluster-based permutation test for densely-sampled, multi-level time series data (ex: eyetracking, EEG)

Language: R - Size: 19.2 MB - Last synced at: 3 days ago - Pushed at: about 2 months ago - Stars: 12 - Forks: 1

immunogenomics/TiRP

code repository for Lagattuta et al. "Repertoire analyses reveal T cell receptor sequence features that influence T cell fate." Nat. Imm. (2022)

Language: Jupyter Notebook - Size: 186 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 12 - Forks: 5

DouweHorsthuis/EEG_to_ERP_pipeline_stats_R

General pipeline used for analyzing EEG data where Raw EEG data gets transformed into ERPS and Stats are done in R (Mixed effects models)

Language: MATLAB - Size: 10.5 MB - Last synced at: 16 days ago - Pushed at: about 1 year ago - Stars: 12 - Forks: 4

GMPE-estimation implements a one-stage estimation algorithm to estimate ground-motion prediction equations (GMPE) with spatial correlation. It also quantifies the uncertainty of spatial correlation and intensity measure predictions.

Language: MATLAB - Size: 3.54 MB - Last synced at: 24 days ago - Pushed at: over 4 years ago - Stars: 11 - Forks: 5

svmiller/stevemisc

Steve's Miscellaneous Functions

Language: R - Size: 22.1 MB - Last synced at: 22 days ago - Pushed at: about 2 months ago - Stars: 10 - Forks: 3

arose13/GMEM

Generalised Mixed Effects Model. Now any machine learning model can have random effects.

Language: Jupyter Notebook - Size: 581 KB - Last synced at: 17 days ago - Pushed at: about 6 years ago - Stars: 9 - Forks: 1

lenz99/lme4cens

Simple Mixed Effect Models and Censoring

Language: HTML - Size: 886 KB - Last synced at: 6 months ago - Pushed at: over 1 year ago - Stars: 6 - Forks: 5

arrjon/Amortized-NLME-Models

Applying amortizing neural posterior estimation for non-linear mixed effects models

Language: Jupyter Notebook - Size: 575 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 5 - Forks: 0

solislemuslab/HighDimMixedModels.jl

Julia package for fitting regularized linear mixed-effect models on high-dimensional omics data.

Language: Julia - Size: 12.2 MB - Last synced at: 2 days ago - Pushed at: 12 days ago - Stars: 4 - Forks: 2

RePsychLing/SMLP2024 📦

SMLP2024: Advanced methods in frequentist statistics with Julia

Language: Julia - Size: 22.1 MB - Last synced at: 19 days ago - Pushed at: 24 days ago - Stars: 4 - Forks: 4

TuoooLiu666/Applied-Biostatistics-Projects

This repository commits to the application of biostatistics knowledge on clinical, randomized trials and observational studies.

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ihmeuw-msca/CorrelatedCounts

Modeling correlated count data

Language: Python - Size: 1.7 MB - Last synced at: 2 months ago - Pushed at: almost 5 years ago - Stars: 4 - Forks: 0

mcanouil/eggla

Early Growth Genetics Longitudinal Analysis.

Language: R - Size: 44.5 MB - Last synced at: 17 days ago - Pushed at: 26 days ago - Stars: 3 - Forks: 1

tamas-ferenci/TumorGrowthModels

Simple mixed-effects growth models applied to tumor growth (modeling the effect of treatment and measurement method)

Language: R - Size: 13.7 KB - Last synced at: about 2 years ago - Pushed at: about 5 years ago - Stars: 3 - Forks: 0

PeerChristensen/PitchMetaphor_study1

R scripts for analysing data from a language production study with bilinguals

Language: R - Size: 5.97 MB - Last synced at: about 2 years ago - Pushed at: over 5 years ago - Stars: 3 - Forks: 0

radlfabs/flexcv

Python package customizing nested cross validation for tabular data.

Language: Python - Size: 3.46 MB - Last synced at: 22 days ago - Pushed at: 8 months ago - Stars: 2 - Forks: 0

ie8701va/ZK-assignment

Explaining postoperative pain after mandibular third molar extraction.

Language: R - Size: 15.6 KB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 1 - Forks: 0

ucla-biostat-200c/2023spring

Course website for UCLA Biostat 200C - 2023 Spring

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CognitiveNeuroLab/Pipeline_EEG_to_ERP_EEGlab_stats_R Fork of DouweHorsthuis/EEG_to_ERP_pipeline_stats_R

General pipeline used for analyzing EEG data where Raw EEG data gets transformed into ERPS and Stats are done in R (Mixed effects models)

Language: MATLAB - Size: 10.5 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0

lfguevarag97/Thesis-MSC-2023

Documentación del trabajo de investigación de Tesis de Maestría - Luis Felipe Guevara Gómez

Language: TeX - Size: 130 MB - Last synced at: 9 months ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

mmkim1210/bleph

👁️🧿👀🙄💉✂🪡𖠣🩹

Language: Julia - Size: 406 KB - Last synced at: 4 days ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

palday/krakow2023

Language: TeX - Size: 2.17 MB - Last synced at: about 2 months ago - Pushed at: almost 2 years ago - Stars: 1 - Forks: 0

shrey-gupta/belief-persistence-evis23

This is the supplementary archive for the project: Belief Persistence

Language: Jupyter Notebook - Size: 11 MB - Last synced at: almost 2 years ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 0

DouweHorsthuis/Mixed-effect-models

Mixed effects models for R

Language: RMarkdown - Size: 2.47 MB - Last synced at: 16 days ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 2

MicheleDiSabato/statistics-behind-spotify

Is it possible to predict the popularity of a song based on its technical features? Which aspect of a song should an artist focus on to get more visibility? Could record labels or a new up-and-coming artist benefit from these data-driven and data-informed decisions?

Language: R - Size: 17 MB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 0

seamusgould/FLIGHT

A lightweight implementation of Dr. Fill

Language: HTML - Size: 9.76 MB - Last synced at: almost 2 years ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 0

matthewjlutz/army_ant_scaffolds

This repository contains R and Matlab code and data used in the paper "Individual error correction drives responsive self-assembly of army ant scaffolds." Lutz, et al. PNAS, 2021.

Language: MATLAB - Size: 6.95 MB - Last synced at: about 1 year ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0

araiari/Dialysis-Study-of-calcium-concentration

Statistical analysis on calcium concentration during dialysis

Language: R - Size: 151 KB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 0

shivankurkapoor/molecular-dating

HIV-1 Incidence and Infection Time Estimator

Language: Python - Size: 1.73 MB - Last synced at: about 2 years ago - Pushed at: almost 7 years ago - Stars: 1 - Forks: 0

Fabio-Vieira/EBF

An R package to compute Empirical Bayes Factors from random-effect estimates. This test can be used in the mixed-effect model context to determine whether an effect should be fixed or random.

Language: R - Size: 12.7 KB - Last synced at: 26 days ago - Pushed at: 26 days ago - Stars: 0 - Forks: 0

project-seagrass/FeedbacksSeagrassRestoration

Double-hurdle model approach to predict “seagrass emergence success” and “seagrass growth success” across planted field plots

Language: R - Size: 5.86 KB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

cliattx/lmeSCED

An R package for linear mixed-effects modeling in single-case experimental designs (SCEDs).

Language: R - Size: 57.6 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0

AhmetZamanis/BayesianModelingExperiments

Experimenting with Bayesian modeling using the PyMC package.

Language: Jupyter Notebook - Size: 26.8 MB - Last synced at: 2 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0

ie8701va/PythonCourse

Course output - Python Programming for Behavioral Sciences

Language: Python - Size: 28.3 KB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0

palday/economics2024

An introduction to the MixedModels.jl ecosystem in Julia

Language: Julia - Size: 11.7 MB - Last synced at: 6 days ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

PhilippeSantenoise/WIDEa

WIDEa (Web Interface for Data Exploration) is R-based software aiming to provide users with a range of functionalities to explore, manage, clean and analyse "big" environmental and (in/ex situ) experimental data.

Language: R - Size: 13.6 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

yufongpeng/AnovaMixedModels.jl

Conduct one-way and multi-way anova in Julia with MixedModels.jl

Language: Julia - Size: 94.7 KB - Last synced at: 18 days ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

RezaDastranj/LMEASDRs.jl

Analysing Age-Specific Death Rates with MixedModels.jl

Language: Julia - Size: 22.6 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

pablobernabeu/Language-and-vision-in-conceptual-processing-Multilevel-analysis-and-statistical-power

This incomplete repository is used to facilitate the consultation of individual files in this project. Only files smaller than 100 MB are available here. The complete project is available at http://doi.org/10.17605/OSF.IO/UERYQ.

Language: R - Size: 822 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

pablobernabeu/plot.fixef.allFit

Visualise the output from allFit(), to look at the parameters for a set of predictors across a set of optimizers (e.g., bobyqa, Nelder-Mead, etc.)

Language: R - Size: 24.4 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

AhmetZamanis/MixedEffectsRegressionDeliveryTimes

Testing models from the GPBoost package against regular gradient boosting.

Language: Jupyter Notebook - Size: 6.03 MB - Last synced at: 2 months ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

celebrezze/local-flam-paper

'Live fuel moisture and shoot water potential exhibit contrasting relationships with leaf-level flammability thresholds during laboratory flammability tests', by Indra Boving, Joe Celebrezze, Aaron Ramirez, Ryan Salladay, Leander Love-Anderegg and Max Moritz

Language: HTML - Size: 91.2 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 1

Cricelio23/Hospitalization_WW

Data and codes for the paper: A Mixed-Effects Model to Predict COVID-19 Hospitalizations Using Wastewater Surveillance

Language: R - Size: 2.93 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

nathanalade/In-Vitro-NLME

Mixed-Effect Models for In Vitro Xenobiotic Metabolism

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celebrezze/flam-methods-comparison

'Tissue-level flammability testing: A review of existing methods and a comparison of a novel hot plate design to an epiradiator design', by Joe Celebrezze, Indra Boving, and Max Moritz

Language: HTML - Size: 47.8 MB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

toduckhanh/ClusROC

The R package ClusROC

Language: R - Size: 1.82 MB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

p-razavi/anger_expressor_percept

Comparisons of the judgments of people who express anger vs. those who do not

Language: R - Size: 2.8 MB - Last synced at: 6 months ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

joosung-min/ssc22-case-comp Fork of rennydoig/ssc22-case-comp

2022 Statistical Society of Canada Case Study Competition

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jordache-ramjith/Andolina2022

This repository includes the R code and data used in the analysis for the main manuscript of the paper. The cleaned data file consists of the data for only the 104 incident infections used. The ped.RDS file is an R data file for the piece-wise exponential data formulation of the survival data for the competing risks analysis. The descriptives file consists of all descriptive analyses conducted in the study whether included or not. The gametocyte incidence file consists of the R code for the competing risks analysis for gametocyte incidence and malaria clearance. The Clearance Kaplan-Meier is the file used to capture the Kaplan-Meier of the time to clearance of parasites (Table 2). The parasite density, gametocyte density, gametocyte fraction file are the R codes for the longitudinal non-linear mixed effects models and should be executed in that order. .

Language: R - Size: 1.35 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

KAR-NG/Life-Expectancy-Statistical-Analysis-WHO-

Statistically answered 8 research questions using Multiple Factor Analysis (MFA), Principal Component Analysis (PCA), Multiple Linear Regression, Welch's t-test, Wilcoxon signed-rank test, and Longitudinal Multilevel Mixed-effect Modeling with time trajectories.

Language: HTML - Size: 34.2 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0