sc-rna-seq-analysis | Topic | Ecosyste.ms: Repos

Topic: "sc-rna-seq-analysis"

NCBI-Codeathons/automated-sc-RNA-seq-analysis-in-the-cloud

Language: Python - Size: 290 KB - Last synced at: 5 months ago - Pushed at: over 2 years ago - Stars: 7 - Forks: 6

Stry233/Automated-Cell-Recognition-Using-Single-cell-RNA-sequencing-with-Machine-Learning

This project (https://doi.org/10.1145/3512452.3512455) investigates and summarizes the superiority and limitations of different dimensionality reduction schemes as well as classification methods in specific single-cell RNA sequencing (scRNA-seq) data sets.

Language: Jupyter Notebook - Size: 23.9 MB - Last synced at: about 1 year ago - Pushed at: over 3 years ago - Stars: 4 - Forks: 0

GiatrasKon/Gastric-Cancer-scRNAseq-Analysis

Recreation and enrichment of the gastric (GC) cancer single-cell RNA-seq (scRNA-seq) data analysis pipeline described in the "Comprehensive analysis of metastatic gastric cancer tumour cells using single‑cell RNA‑seq" by Wang B. et. al, using the raw counts matrix they provide.

Language: Jupyter Notebook - Size: 19.1 MB - Last synced at: about 2 months ago - Pushed at: 6 months ago - Stars: 1 - Forks: 1

NikitaArya17/next_generation_sequencing_projects

A collection of independent research projects involving various methods involving next generation sequencing (NGS) data analysis, including scRNA-seq, RNA-seq and scATAC-seq data.

Language: Jupyter Notebook - Size: 29.3 MB - Last synced at: 18 days ago - Pushed at: 18 days ago - Stars: 0 - Forks: 0