Topic: "vcf-format"
edgardomortiz/vcf2phylip
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
Language: Python - Size: 136 KB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 232 - Forks: 80
davetang/learning_vcf_file
Learning the Variant Call Format
Language: Perl - Size: 42.6 MB - Last synced at: about 2 hours ago - Pushed at: about 1 year ago - Stars: 139 - Forks: 40
biocpp/biocpp-io
BioC++ Input/Output library
Language: C++ - Size: 1.03 MB - Last synced at: almost 2 years ago - Pushed at: about 2 years ago - Stars: 8 - Forks: 6
M-Osky/VCFixer
Checks vcf files and removes loci and samples with too many missings, can also input genotypes in missing (various options for this).
Language: Perl - Size: 93.8 KB - Last synced at: about 2 months ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0
pughlab/cbio_import_utils
Language: Python - Size: 39.1 KB - Last synced at: about 1 year ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 1
zjwinn/KlusterCaller-to-VCF
Modify KASP assay calls to a VCF format
Language: Shell - Size: 71.3 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0
endreth/jVCFparser
A command-line parser for VCF files designed for population genetics analyses.
Language: Java - Size: 2.34 MB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
bdolmo/vcf2json
Convert an standard VCF to JSON format
Language: Python - Size: 1.95 KB - Last synced at: about 2 years ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 1
