Ecosyste.ms: Repos

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Package Usage: conda: perl-http-negotiate

View more package details: https://packages.ecosyste.ms/registries/anaconda.org/packages/perl-http-negotiate

Dependent Repos 16

ifremer-bioinformatics/samba
Standardized and Automated MetaBarcoding Analyses workflow (Mirror)
  • 6.01 containers/qiime2-2019.10/environment.yml

Size: 109 MB - Last synced: 11 months ago - Pushed: 11 months ago

brucemoran/tumour_only
Tumour-only DNA sequencing analysis
  • 6.01 environment.yaml

Size: 58.6 KB - Last synced: about 1 year ago - Pushed: over 1 year ago

lfnothias/qiime2
  • 6.01.* environment.yml

Size: 21.5 KB - Last synced: about 1 year ago - Pushed: over 3 years ago

kircherlab/CADD-scripts
CADD scripts release for offline scoring. For more information about CADD, please visit our website
  • 6.01 envs/environment.yml

Size: 2.02 MB - Last synced: 18 days ago - Pushed: 19 days ago

MPI-SHH-SummerSchool/dag-material
  • 6.01.* Hands on Introduction to Ancient Microbiome Analysis/environment.yml

Size: 489 MB - Last synced: 9 months ago - Pushed: over 2 years ago

evoosa/16S_bacteria_detector
Gets the frequency of bacterias for 16S RRNA sequences using the available algorithms
  • 6.01 src/environment.yml

Size: 97.4 MB - Last synced: about 1 year ago - Pushed: about 3 years ago

omicsclass/biodocker
docker images for bioinformatics
  • 6.01.* ampliseq-q2/environment.yml

Size: 59.2 MB - Last synced: 11 months ago - Pushed: over 1 year ago

ctlab/GScour
Genome-wide detection of positive selection
  • 6.01 environment.yml

Size: 1.89 MB - Last synced: 28 days ago - Pushed: 11 months ago

deconvolute/subgenome
Identification of druggable genes in pathogenic bacteria – subtractive genomics approach
  • 6.01 environment.yml

Size: 10.6 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

bshifaw/long-read-pipelines Fork of broadinstitute/long-read-pipelines
Long read production pipelines
  • 6.01 docker/lr-cloud-downloader/environment.yml

Size: 94.9 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

duncanberger/nxf-BATQual
Bacterial genome assembly, annotation and typing pipeline.
  • 6.01 environment.yaml

Size: 321 KB - Last synced: 10 months ago - Pushed: 10 months ago

liaoherui/StrainAnalyze
StrainAnalyze: a user-friendly bioinformatics pipeline used to analyze given identified bacterial strains in short reads.
  • 6.01 environment.yaml

Size: 14.6 KB - Last synced: about 1 year ago - Pushed: about 1 year ago

neavemj/mappd
Metagenomic Analysis Pipeline for Pathogen Discovery
  • 6.01 environment.yaml

Size: 924 KB - Last synced: 8 months ago - Pushed: 8 months ago

IanSudbery/alvarez_et_al
Code and other scripts for Alvarez-Beneyas et al 2020
  • 6.01 environment.yml

Size: 41.2 MB - Last synced: 9 months ago - Pushed: over 2 years ago

bioinformatics-lab/BioDragon
  • 6.01 environment.yml

Size: 10.9 MB - Last synced: about 1 year ago - Pushed: over 6 years ago

bioinformatics-lab/scratch
  • 6.01 environment.yml

Size: 10.8 MB - Last synced: about 1 year ago - Pushed: about 6 years ago

greenkidneybean/bchb524_final
  • 6.01 environment.yml

Size: 174 KB - Last synced: about 1 year ago - Pushed: over 4 years ago

Hajibabaei-Lab/SCVUC_COI_metabarcode_pipeline
Snakemake bioinformatic pipeline to process COI mtDNA metabarcodes
  • 6.01 environment.yml

Size: 352 KB - Last synced: about 1 year ago - Pushed: almost 4 years ago

bfairkun/design-mpeseq-primers
For designing RT primers with blast search, tm constraints, etc
  • 6.01 environment.yaml

Size: 28.3 KB - Last synced: 7 months ago - Pushed: almost 5 years ago

bfairkun/Comparative_eQTL
Primary data: Chimp eQTLs called from heart tissue samples
  • 6.01 code/snakemake_workflow/envs/environment.yml

Size: 583 MB - Last synced: 9 months ago - Pushed: over 3 years ago

jackkamm/snippy-false-negatives
  • 6.01 environment.yaml

Size: 4.88 KB - Last synced: about 1 year ago - Pushed: about 5 years ago

ErasmusMC-Bioinformatics/WeFaceNano
Nanopore plasmid pipeline (FAST5 basecalling, assembly, plasmid identification and antimicrobial resistance genes identification).
  • 6.01 environment.yml

Size: 6.78 MB - Last synced: about 1 month ago - Pushed: about 3 years ago

mwang87/GNPS_Volatility_Notebooks
  • 6.01.* environment.yml

Size: 14.6 KB - Last synced: about 1 year ago - Pushed: over 3 years ago

jhgille2/Transcriptome-length-discrepency-tool
Some code to (hopefully) help to resolve an issue where sequences in a BAM/SAM header have a different length indicated than what is indicated in both a gtf file and transcriptome file used in a common pipeline
  • 6.01 environment.yml

Size: 32.2 KB - Last synced: about 1 year ago - Pushed: about 1 year ago

qbicsoftware/r-container-lib
A collection of project-related Dockerfiles for a controlled R environment with defined R packages
  • 6.01 projects/QTEST/environment.yml

Size: 150 KB - Last synced: 1 day ago - Pushed: about 3 years ago

oscarlr/IGenotyper_depr
  • 6.01 environment.yml

Size: 4.9 MB - Last synced: about 1 year ago - Pushed: almost 3 years ago

telatin/sequence-formats
  • 6.01 libraries/perl/environment.yaml

Size: 31.3 KB - Last synced: about 1 year ago - Pushed: over 2 years ago

xie186/ViewBS
ViewBS - a powerful toolkit for visualization of high-throughput bisulfite sequencing data
  • environment.yaml

Size: 7.55 MB - Last synced: 7 months ago - Pushed: 11 months ago

unicorn-23/GwasWA
  • 6.01 environment.yml

Size: 75.5 MB - Last synced: 5 months ago - Pushed: 5 months ago