Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

Package Usage: conda: r-sass

Sass compiler package for R
7 versions
Latest release: almost 2 years ago
6 dependent packages

View more package details: https://packages.ecosyste.ms/registries/anaconda.org/packages/r-sass

View more repository details: https://repos.ecosyste.ms/hosts/GitHub/repositories/rstudio%2Fsass

Dependent Repos 18

brucemoran/tumour_only
Tumour-only DNA sequencing analysis
  • 0.4.0 environment.yaml

Size: 58.6 KB - Last synced: about 1 year ago - Pushed: over 1 year ago

btmartin721/ClineHelpR
Detects Outliers and plots genomic clines from BGC output, and extends the plotting functionality of INTROGRESS to Correlate genomic clines and hybrid indices with Environmental Variables
  • 0.4.0 environment.yml

Size: 93.4 MB - Last synced: 7 months ago - Pushed: almost 2 years ago

vaqm2/custom_gwas
Python Code using CyVCF2 to run custom GWAS models on imputed VCF files
  • 0.4.1.* environment.yml

Size: 958 KB - Last synced: about 1 year ago - Pushed: almost 2 years ago

nlm-irp-jianglab/Evolink
:palm_tree: A Phylogenetic Approach for Rapid Identification of Genotype-Phenotype Associations in Large-scale Microbial Multi-species Data
  • 0.4.1 environment.yml

Size: 251 MB - Last synced: 9 months ago - Pushed: 9 months ago

GWeindel/lecture_R
A really short introduction (4 hours lecture) for psychology doctoral students at Aix Marseille University.
  • 0.3.1 environment.yml

Size: 4 MB - Last synced: about 1 year ago - Pushed: about 3 years ago

jamesfitton/cxr
Intertidal water occurrence generator from Sentinel 2 satellite data and Google Earth Engine
  • 0.4.2 environment.yml

Size: 1 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

russHyde/mast-shiny
Notes / code from working through "Mastering Shiny". Written while running a R4DS bookclub
  • 0.3.1.* conda/environment.yml

Size: 154 KB - Last synced: about 1 year ago - Pushed: almost 3 years ago

greenelab/2022-cf-sputum
Analysis of cystic fibrosis sputum RNA-seq samples for discovery of interesting gene expression pathways
  • 0.4.0 environment.yml

Size: 4.92 MB - Last synced: 9 months ago - Pushed: over 1 year ago

kevinpryan/caf-subtype-analysis
  • 0.4.1 environment.yml

Size: 56.9 MB - Last synced: 8 months ago - Pushed: 8 months ago

mr-eyes/denovo-rnaseq
De novo assembly, Differential gene expression, and annotation workflow
  • 0.4.1 environment.yml

Size: 1.79 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

gonzalosm98/scRNA-SeqAnalysis
  • 0.4.0 environment.yml

Size: 62.5 KB - Last synced: about 1 year ago - Pushed: over 1 year ago

cjc77/Fogg-Lab-RNA-Seq-analysis
Preliminary analysis and informatics for TCGA gynecological cancer data
  • 0.3.1.* environment.yml

Size: 61.3 MB - Last synced: 4 months ago - Pushed: over 1 year ago

macs3-project/genomics-analysis-pipelines Fork of taoliulab/genomics-analysis-pipelines
Pipeline codes for analyzing various genomics datasets based on MACS3
  • environment.yaml

Size: 1.46 MB - Last synced: 2 months ago - Pushed: 2 months ago

gagneurlab/transmicron
  • 0.4.1.* environment.yml

Size: 16.7 MB - Last synced: 5 days ago - Pushed: over 1 year ago

SteMIDIfactory/P-DOR
Quick and easy outbreak reconstruction pipeline
  • 0.4.1 environment.yml

Size: 37.7 MB - Last synced: 3 months ago - Pushed: 8 months ago

mjaquiery/genetics-snakemake
Snakemake workflow for handling PRS scores and relatedness calculations for human genetic data from ALSPAC.
  • 0.4.4 workflow/envs/environment.yaml

Size: 1.44 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

paezha/PyERT-BLACK
Capstone project for course 4G06
  • 0.4.2 environment.yml

Size: 23.2 MB - Last synced: 11 days ago - Pushed: about 1 year ago

phbradley/tcr-gwas
Collaboration to find genetic variation associated with TCR repertoire differences
  • 0.3.1 environment.yml

Size: 176 MB - Last synced: 26 days ago - Pushed: over 2 years ago

magdalenarussell/mechanistic-trimming
Collaboration to identify sequence-level determinants of nucleotide trimming during V(D)J recombination
  • 0.4.2 environment.yml

Size: 185 MB - Last synced: 20 days ago - Pushed: 20 days ago

giorgioangel/evc
Official repository of the paper "An Offline Risk-aware Policy Selection Method for Bayesian Markov Decision Processes"
  • 0.4.0 environment.yml

Size: 58.6 KB - Last synced: 9 months ago - Pushed: almost 2 years ago

nerettilab/scRNA_seq
Utilities scripts for the analysis of single cell transcriptomics
  • 0.3.1 environment.yml

Size: 23.4 KB - Last synced: 5 months ago - Pushed: almost 3 years ago

jhgille2/rna_seq_pipeline_template
WIP reproducible pipeline for rna seq differential expression analysis
  • 0.4.5 environment.yml

Size: 77.1 KB - Last synced: about 1 year ago - Pushed: about 1 year ago

zia-foisal/reproducible_drought_index
A repository to practice reproducible research practices while studing the state of the drought around the world
  • 0.4.2 environment.yaml

Size: 10.7 KB - Last synced: 12 months ago - Pushed: over 1 year ago

crlero/snakemake-tutorial
  • 0.4.1.* handson/workflow/environment.yaml

Size: 3.39 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago

TeamPerie/Report_Daphne Fork of dvginneken/Reproduce_Thesis_InstitutCurie
  • 0.4.5 environment.yml

Size: 32.6 MB - Last synced: 10 months ago - Pushed: 10 months ago

yarikoptic/example-notebooks-1 Fork of dandi/example-notebooks
  • 0.4.5 000039/AllenInstitute/environment.yml

Size: 16.1 MB - Last synced: 10 months ago - Pushed: 10 months ago

kylestanley1313/ffa-p1
A repository for code related to the first iteration of functional factor analysis (FFA).
  • 0.4.5.* environment.yml

Size: 1.17 MB - Last synced: 27 days ago - Pushed: 6 months ago

robert-altwasser/umi-processing
  • 0.4.1 env/environment.yml

Size: 340 KB - Last synced: 5 months ago - Pushed: 6 months ago

Mye-InfoBank/SIMBA
A nextflow pipeline for processing sc-RNASeq data, performing QC and integration and preparing the results for further investigation using cellxgene.
  • 0.4.8 docker/rpy/environment.yml

Size: 981 MB - Last synced: about 1 month ago - Pushed: about 1 month ago

nathan-adeyemi/Inpatient-Bed-Allocation-Optimization
  • 0.4.8.* environment.yaml

Size: 8.22 MB - Last synced: 4 months ago - Pushed: 4 months ago

Kenneth-Mitchell/HMC-Thesis
  • 0.4.7 environment.yml

Size: 8.85 MB - Last synced: about 1 month ago - Pushed: about 1 month ago

WenfeiY/P.patens_geno_design
Python and R script for Physcomitrium patens genome design
  • 0.4.8 environment.yml

Size: 865 KB - Last synced: about 2 months ago - Pushed: about 2 months ago

a-hr/pol2speed_pipeline
  • 0.4.9 environment.yaml

Size: 15.9 MB - Last synced: about 6 hours ago - Pushed: about 7 hours ago

SteinPanyu/IndependentReproducibility
  • 0.4.4 environment.yaml

Size: 20.2 MB - Last synced: 7 days ago - Pushed: 7 days ago

dandi/example-notebooks
  • 0.4.5 000039/AllenInstitute/environment.yml

Size: 57.5 MB - Last synced: about 22 hours ago - Pushed: about 23 hours ago