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GitHub / KwanLab / Autometa

Autometa: Automated Extraction of Genomes from Shotgun Metagenomes

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KwanLab%2FAutometa

Stars: 39
Forks: 15
Open Issues: 44

License: other
Language: Python
Repo Size: 78.9 MB
Dependencies: 64

Created: over 4 years ago
Updated: about 1 month ago
Last pushed: 3 months ago
Last synced: 24 days ago

Topics: binning, metagenomics, taxon-profiling

Files
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    Readme
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    Dependencies
    docs/requirements.txt pypi
    .github/workflows/docker_autometa.yml actions
    .github/workflows/docker_get_genomes_for_mock.yml actions
    .github/workflows/docker_mock_data_reporter.yml actions
    .github/workflows/linting.yml actions
    .github/workflows/linting_comment.yml actions
    .github/workflows/pytest_codecov.yml actions
    Dockerfile docker
    modules/nf-core/modules/bowtie2/align/meta.yml cpan
    modules/nf-core/modules/prodigal/meta.yml cpan
    setup.py pypi
    tests/environment.yml conda