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GitHub / LieberInstitute / TREG
Tools for finding Total RNA Expression Genes in single nucleus RNA-seq data
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/LieberInstitute%2FTREG
Stars: 4
Forks: 2
Open Issues: 2
License: None
Language: R
Repo Size: 22.7 MB
Dependencies:
28
Created: almost 3 years ago
Updated: 20 days ago
Last pushed: 20 days ago
Last synced: 20 days ago
Topics: bioconductor, deconvolution, rnascope, rstats, scrna-seq, smfish, snrna-seq, treg
Files
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Readme
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Dependencies
.github/workflows/check-bioc.yml
actions
- JamesIves/github-pages-deploy-action releases/v4 composite
- actions/cache v3 composite
- actions/checkout v3 composite
- actions/upload-artifact master composite
- docker/build-push-action v4 composite
- docker/login-action v2 composite
- docker/setup-buildx-action v2 composite
- docker/setup-qemu-action v2 composite
- r-lib/actions/setup-pandoc v2 composite
- r-lib/actions/setup-r v2 composite
DESCRIPTION
cran
- R >= 4.2 depends
- SummarizedExperiment * depends
- Matrix * imports
- purrr * imports
- rafalib * imports
- BiocFileCache * suggests
- BiocStyle * suggests
- RefManageR * suggests
- SingleCellExperiment * suggests
- dplyr * suggests
- ggplot2 * suggests
- knitr * suggests
- pheatmap * suggests
- rmarkdown * suggests
- sessioninfo * suggests
- testthat >= 3.0.0 suggests
- tibble * suggests
- tidyr * suggests