dvoelkl/HIDE

Implementation of HIDE as proposed in Völkl et al (2025), HIDE: Hierarchical cell-type Deconvolution

Language: Python - Size: 83.1 MB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 3 - Forks: 0

WireCell/wire-cell-toolkit Fork of brettviren/wire-cell-toolkit

Toolkit for Liquid Argon TPC Simulation and Reconstruction

Language: C++ - Size: 73.6 MB - Last synced at: about 21 hours ago - Pushed at: about 23 hours ago - Stars: 9 - Forks: 23

BioimageAnalysisCoreWEHI/napari_lattice

Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for data from the Zeiss lattice lightsheet microscope.

Language: Jupyter Notebook - Size: 180 MB - Last synced at: 1 day ago - Pushed at: 4 days ago - Stars: 13 - Forks: 4

Paradigm-Free-Mapping/pySPFM

Python version of 3dPFM and 3dMEPFM

Language: Python - Size: 16.1 MB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 1 - Forks: 4

flatironinstitute/CaImAn

Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

Language: Python - Size: 573 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 682 - Forks: 386

denniepatton/Keraon

As a tool for cancer subtype prediction, Keraon uses features derived from cell-free DNA (cfDNA) in conjunction with PDX reference models to perform both classification and heterogenous phenotype fraction estimation.

Language: Python - Size: 2.21 MB - Last synced at: 8 days ago - Pushed at: 9 days ago - Stars: 6 - Forks: 2

HelmchenLabSoftware/Cascade

Calibrated inference of spiking from calcium ΔF/F data using deep networks

Language: Jupyter Notebook - Size: 463 MB - Last synced at: 9 days ago - Pushed at: 10 days ago - Stars: 151 - Forks: 46

mkizilov/ReconFit

Language: Jupyter Notebook - Size: 4.36 MB - Last synced at: 12 days ago - Pushed at: 12 days ago - Stars: 3 - Forks: 0

owkin/PyDeconv

Python implementation of bulk RNAseq deconvolution algorithms

Language: Python - Size: 115 MB - Last synced at: 10 days ago - Pushed at: about 2 months ago - Stars: 41 - Forks: 0

CompEpigen/methylbert

A Transformer-based model for read-level DNA methylation pattern identification and tumour deconvolution

Language: Jupyter Notebook - Size: 3.02 MB - Last synced at: 7 days ago - Pushed at: 6 months ago - Stars: 36 - Forks: 5

SteamedFish6/NextVpower

Next V-Power is a tool for multi-virus lineage demixing from amplicon sequencing data.

Language: Python - Size: 85.1 MB - Last synced at: 21 days ago - Pushed at: 21 days ago - Stars: 0 - Forks: 1

Qingyueee/DECLUST

A cluster-based cell-type deconvolution of spatial transcriptomic data

Language: Jupyter Notebook - Size: 18.1 MB - Last synced at: 19 days ago - Pushed at: 22 days ago - Stars: 3 - Forks: 1

Bhatta6190/Waveform-LiDAR-Analysis

Content related to waveform lidar data analysis.

Language: Jupyter Notebook - Size: 85.5 MB - Last synced at: 22 days ago - Pushed at: 22 days ago - Stars: 0 - Forks: 0

infinity-a11y/KiwiFlow

Data analysis workflow for proteomics mass spectrometry featuring bayesian deconvolution and various downstream analyses.

Language: R - Size: 11.4 MB - Last synced at: 19 days ago - Pushed at: 19 days ago - Stars: 1 - Forks: 0

jolideco/jolideco

A Python package for Poisson joint likelihood deconvolution

Language: Python - Size: 4.14 MB - Last synced at: 1 day ago - Pushed at: 5 months ago - Stars: 12 - Forks: 4

elgw/deconwolf

Deconvolution of widefield microscopy images and generation of point spread functions

Language: C - Size: 8.01 MB - Last synced at: 17 days ago - Pushed at: 17 days ago - Stars: 49 - Forks: 5

skandlab/cite

repository for CITE webapp

Language: TypeScript - Size: 2.4 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 0

Alexis-Varin/RightOmicsTools

An R package providing tools for single-cell RNA-seq data analysis

Language: R - Size: 9.82 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 5 - Forks: 0

bdsc-tds/SPLIT

Profile purification of single-cell spatial transcriptomics data

Language: R - Size: 5.48 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 14 - Forks: 1

kalidouBA/DICEPRO

Semi-Supervise cellular deconvolution of Bulk RnaSeq using NMF and CiberSortx, DCQ or others

Language: R - Size: 42.2 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 3 - Forks: 0

KevinMenden/scaden

Deep Learning based cell composition analysis with Scaden.

Language: Python - Size: 1020 KB - Last synced at: about 1 month ago - Pushed at: 10 months ago - Stars: 81 - Forks: 28

smith6jt-cop/KINTSUGI

Jupyter notebook based multiplex image processing pipeline.

Language: Jupyter Notebook - Size: 534 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 7 - Forks: 0

LieberInstitute/DeconvoBuddies

Helper Functions for LIBD Deconvolution

Language: R - Size: 64.7 MB - Last synced at: 8 days ago - Pushed at: about 1 month ago - Stars: 5 - Forks: 2

BIMSBbioinfo/deconvR

The deconvR is an R package designed for analyzing deconvolution of the bulk sample(s) using an atlas of reference omic signature profiles and a user-selected model.

Language: R - Size: 39.8 MB - Last synced at: 5 days ago - Pushed at: about 1 month ago - Stars: 10 - Forks: 3

SML-CompBio/ACSCEND

Comprehensive Enumeration of Cancer Stem-like Cell Heterogeneity Using Deep Neural Network

Language: Jupyter Notebook - Size: 18.7 MB - Last synced at: 21 days ago - Pushed at: about 2 months ago - Stars: 1 - Forks: 0

Liuy12/SCdeconR

Deconvolution of bulk RNA-seq data using single-cell RNA-seq data as reference

Language: HTML - Size: 38.8 MB - Last synced at: 13 days ago - Pushed at: about 2 months ago - Stars: 5 - Forks: 0

BDomzal/magnetstein

Tools for analysis of nuclear magnetic resonance (NMR) spectra using the Wasserstein metric.

Language: Jupyter Notebook - Size: 14.5 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 4 - Forks: 4

unfoldtoolbox/Unfold.jl

Neuroimaging (EEG, fMRI, pupil ...) regression analysis in Julia

Language: Julia - Size: 70.8 MB - Last synced at: 1 day ago - Pushed at: 12 days ago - Stars: 62 - Forks: 14

sof202/HyLoRD

A Hybrid Approach for Cell Type Deconvolution in Long-Read (ONT) Methylation Data

Language: C++ - Size: 427 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

SciComp8/NGSOmics_Programming

Computational biology/bioinformatics workflows, codes, tech & concept notes on NGS data

Language: HTML - Size: 8.32 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 6 - Forks: 0

jrbourbeau/pyunfold

Iterative unfolding for Python

Language: Python - Size: 6.82 MB - Last synced at: 2 days ago - Pushed at: almost 5 years ago - Stars: 28 - Forks: 13

theislab/hadge

Comprehensive pipeline for donor demultiplexing in single cell

Language: Nextflow - Size: 9.13 MB - Last synced at: 8 days ago - Pushed at: 8 days ago - Stars: 24 - Forks: 8

roflmaostc/DeconvOptim.jl

A multi-dimensional, high performance deconvolution framework written in Julia Lang for CPUs and GPUs.

Language: Julia - Size: 21.1 MB - Last synced at: 1 day ago - Pushed at: 5 months ago - Stars: 65 - Forks: 6

sof202/SQUIRE

Statistical Quality Utility for Ideal Reference matrix Enhancement (for use with HyLoRD)

Language: Python - Size: 71.3 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

compneuro-da/rsHRF

rsHRF: A Toolbox for Resting State HRF Deconvolution and Connectivity Analysis (MATLAB)

Language: MATLAB - Size: 104 MB - Last synced at: 4 months ago - Pushed at: about 1 year ago - Stars: 51 - Forks: 15

takushim/momomagick

Python toolkit for 2D/3D image processing using CPU or GPU

Language: Python - Size: 23 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 6 - Forks: 0

Juanx65/DeepDeconvV2

Deep Deconvolution for Seismic Waves with Real and Simulated Distributed Acoustic Sensing Data: State-of-the-Art Review

Language: Python - Size: 33.9 MB - Last synced at: 2 days ago - Pushed at: over 1 year ago - Stars: 14 - Forks: 2

WeisongZhao/Sparse-SIM

Official MATLAB implementation of the "Sparse deconvolution" -v1.0.3

Language: MATLAB - Size: 15.1 MB - Last synced at: 4 months ago - Pushed at: 5 months ago - Stars: 87 - Forks: 14

unfoldtoolbox/unfold

A matlab EEG toolbox to perform overlap correction and non-linear & linear regression.

Language: MATLAB - Size: 38.3 MB - Last synced at: about 1 month ago - Pushed at: 4 months ago - Stars: 61 - Forks: 16

sashielvagus/Multimodal-Deconvolution-of-Zebrafish-Gene-Expression-Using-MuSiC-Project

Multimodal project: MuSiC used to process gene expression data using a signature matrix built from single-cell RNA-seq data that defines gene profiles for each cell type. The goal of this project is to use multimodal to quantify how environmental exposures alter gene expression in zebrafish.

Language: R - Size: 16.6 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

BDomzal/magnetstein_x_chemical_reactions

Employing Magnetstein for the analysis of chemical reactions.

Language: Jupyter Notebook - Size: 1.55 GB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

SKYL2R/cleanfm

Implementation of the Dirichlet Kernel Deconvolution algorithm for precise FFT parameter estimation and near-perfect elimination of spectral leakage. Additionally includes the "Cleaned" STFT and the Frequency Modulation Transform. Repository for code contained in Matthew McQuistion's Applied Mathematics Honors Thesis at Brown University

Language: C - Size: 18.8 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

Lukeli0425/Galaxy-Deconv

Official code for Galaxy Image Deconvolution for Weak Gravitational Lensing with Unrolled Plug-and-Play ADMM

Language: Jupyter Notebook - Size: 4.91 GB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 54 - Forks: 5

Papatheodorou-Group/CATD_snakemake

Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq datasets

Language: R - Size: 27.5 MB - Last synced at: 1 day ago - Pushed at: 4 months ago - Stars: 15 - Forks: 3

matthewmcq/cleanfm

Implementation of the Dirichlet Kernel Deconvolution algorithm for precise FFT parameter estimation and spectral leakage elimination. Repository for code contained in Matthew McQuistion's Applied Mathematics Honors Thesis at Brown University

Language: C - Size: 256 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 1 - Forks: 0

MsMatias/MixturePy

Language: Python - Size: 110 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 1

pashtari/deconver

Official PyTorch Implementation of "Deconver: A Deconvolutional Network for Medical Image Segmentation"

Language: Python - Size: 20.5 KB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 4 - Forks: 0

kpreveza/Stimulated-Luminescence

Python scripts to perform deconvolution of stimulated luminescence curves and fitting analysis of dose responce curves.

Language: Python - Size: 319 KB - Last synced at: 4 months ago - Pushed at: about 3 years ago - Stars: 1 - Forks: 1

hjhaghshenas/SMND

Skip-connected autoencoder semi-blind multichannel nonstationary deconvolution (SMND) for seismic data

Language: Python - Size: 17.3 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

vgkavin/Deconvolution--BayesPrism

Deconvolution of bulk RNA seq data using annotated single cell RNA seq dataset as reference

Language: R - Size: 1000 Bytes - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

NathanSkene/EWCE

Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.

Language: R - Size: 38.3 MB - Last synced at: 4 months ago - Pushed at: 7 months ago - Stars: 57 - Forks: 26

KnutOlaD/Deconv_code_data

Deconvolution of the growth law equation. Theory and experiments published at https://doi.org/10.5194/gi-11-293-2022

Language: Python - Size: 1.35 MB - Last synced at: 1 day ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 1

agarnung/image-deblurring-exploration

An attempt to make my mobile phone's camera work

Language: Jupyter Notebook - Size: 29.6 MB - Last synced at: 5 months ago - Pushed at: 6 months ago - Stars: 2 - Forks: 0

itserphun/CyclicVoltammetryDeconvolution

Language: Jupyter Notebook - Size: 12.7 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0

msacchi/SeismicLab

Matlab research tools to read, write and process seismic data

Language: MATLAB - Size: 20.8 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 82 - Forks: 20

Biomedical-Imaging-Group/DeconvolutionLab2

Java (ImageJ/Fiji) software package for 3D deconvolution microscopy

Language: Java - Size: 2.3 MB - Last synced at: 5 months ago - Pushed at: over 6 years ago - Stars: 55 - Forks: 15

alcarbone/S5P_SISR_Toolbox

Sentinel-5P Single-Image Super-Resolution Toolbox

Language: Python - Size: 361 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 6 - Forks: 3

VladKarpushin/out_of_focus_deblur

You will learn how to recover an out-of-focus image by Wiener filter

Language: C++ - Size: 9.83 MB - Last synced at: 5 months ago - Pushed at: almost 7 years ago - Stars: 41 - Forks: 13

manyaafonso/pySENS

Python implementation of optimization methods for inverse problems in imaging.

Language: Jupyter Notebook - Size: 3.32 MB - Last synced at: 5 months ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 1

dpscience/DLTReconvolution

DLTReconvolution - A Python based software for the analysis of lifetime spectra using the iterative least-square reconvolution method

Language: Python - Size: 412 KB - Last synced at: 3 months ago - Pushed at: over 4 years ago - Stars: 7 - Forks: 6

alpinedev51/Hyperspectral-Deep-Deconvolution 📦

Project on using deep models for deconvolution of hyperspectral images with chromatic aberration.

Language: TeX - Size: 142 MB - Last synced at: 17 days ago - Pushed at: 11 months ago - Stars: 2 - Forks: 1

yymao/abundancematching

A Python package for subhalo abundance matching (SHAM) with scatter.

Language: Python - Size: 39.1 KB - Last synced at: 1 day ago - Pushed at: 7 months ago - Stars: 6 - Forks: 1

WeisongZhao/SACD

Source code of SACD(Super-resolution with Auto-Correlation two-step Deconvolution)

Language: MATLAB - Size: 27 MB - Last synced at: 2 months ago - Pushed at: over 2 years ago - Stars: 11 - Forks: 4

imcf/hrm_containerization 📦

:crystal_ball::microscope: Installation scripts for setting up the HRM in containers. :truck: :construction: :whale:

Language: Shell - Size: 25.4 KB - Last synced at: 6 months ago - Pushed at: about 6 years ago - Stars: 1 - Forks: 0

diegommcc/SpatialDDLS

Deconvolution of spatial transcriptomics data based on Deep Learning

Language: R - Size: 131 MB - Last synced at: 18 days ago - Pushed at: 10 months ago - Stars: 5 - Forks: 2

Marzi-lab/CHAS

Cell type-specific Histone Acetylation Score

Language: R - Size: 169 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 3 - Forks: 1

broadinstitute/temporal-rna-seq-deconvolution

Package for temporal deconvolution of bulk RNA-seq samples using SVI

Language: Jupyter Notebook - Size: 22.1 MB - Last synced at: 3 months ago - Pushed at: almost 2 years ago - Stars: 2 - Forks: 0

Juanx65/DeepDeconv

Deep Deconvolution for Seismic Waves with Real and Simulated Distributed Acoustic Sensing Data: State-of-the-Art Review

Language: Python - Size: 20.9 MB - Last synced at: 2 days ago - Pushed at: almost 3 years ago - Stars: 4 - Forks: 0

eonurk/seAMLess

A single cell transcriptomics based deconvolution pipeline for Leukemia

Language: R - Size: 93 MB - Last synced at: 4 days ago - Pushed at: 9 months ago - Stars: 2 - Forks: 1

LieberInstitute/TREG

Tools for finding Total RNA Expression Genes in single nucleus RNA-seq data

Language: R - Size: 24.1 MB - Last synced at: 16 days ago - Pushed at: 9 months ago - Stars: 4 - Forks: 2

fzimmermann89/bsc

Bachelor Thesis

Language: TeX - Size: 150 MB - Last synced at: 3 months ago - Pushed at: over 4 years ago - Stars: 3 - Forks: 0

ChristianOrr/feature-attribution-methods-jax

Suite of methods that create attribution maps from image classification models.

Language: Jupyter Notebook - Size: 1.72 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 6 - Forks: 1

eurunuela/phd

A website version of my PhD dissertation.

Language: JavaScript - Size: 228 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 1 - Forks: 0

bguo068/posseleff_empirical

Nextflow pipeline for analyzing empirical WGS data for the effect of positive selection on IBD-based inference

Language: Nextflow - Size: 2.15 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 1 - Forks: 0

vgkavin/Deconvolution--ImmuCellAI-Mouse

Deconvoluting mouse Immune cell fractions from Bulk RNAseq data with ImmuCell-AI_mouse

Language: R - Size: 384 KB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

code-instable/ENSAI-2A-stage-FGAM

ENSAI : Stage 2A - modèles additifs fonctionnels & déconvolution

Language: TeX - Size: 6.44 MB - Last synced at: 8 months ago - Pushed at: 10 months ago - Stars: 1 - Forks: 0

XWangLabTHU/ARIC

Accurate and robust inference of cell type proportions from bulk gene expression or DNA methylation data

Language: Python - Size: 820 KB - Last synced at: 19 days ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 3

IHB-IBR-department/BOLD_deconvolution

BOLD signal deconvolution based on ridge regression. Can be used to calculate psycho-physiological interaction (PPI) at the neuronal level. Python and MATLAB functions recover neuronal time series, similar to the Parametric Empirical Bayes (PEB) approach implemented in SPM12 (spm_peb_ppi.m).

Language: Jupyter Notebook - Size: 2.77 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

alex-lechner/PyTorch-GAN

Creating artificial images with a Generative Adversarial Network written in PyTorch.

Language: Python - Size: 304 MB - Last synced at: 5 months ago - Pushed at: almost 7 years ago - Stars: 8 - Forks: 8

micsthepick/REAPERDenoiser Fork of Nbickford/REAPERDenoiser

A JSFX denoiser for REAPER based on Norbert Weiner's deconvolution algorithm.

Language: Shell - Size: 22 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 11 - Forks: 0

mdtanker/RIS_basement_sediment

Ross Ice Shelf basement depths and sediment thickness

Language: Jupyter Notebook - Size: 682 MB - Last synced at: 5 months ago - Pushed at: about 3 years ago - Stars: 9 - Forks: 3

hyeonsangjeon/disparity-based-space-vagriant-image-deblurring

“Disparitybased space-variant image deblurring,” Signal Processing: Image Communication, vol. 28, no. 7, pp. 792–808, 2013.

Size: 20.5 MB - Last synced at: 2 months ago - Pushed at: 12 months ago - Stars: 14 - Forks: 0

jebard/ACED

ACED

Language: R - Size: 239 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

Masharipov/TMFC_simulations

Repository for Masharipov, Knyazeva, Korotkov, Cherednichenko & Kireev: "Comparison of whole-brain task-modulated functional connectivity methods for fMRI task connectomics"

Language: Jupyter Notebook - Size: 1.96 GB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 1

jiaweih14/DeepDecon

DeepDecon accurately estimates cancer cell fractions in bulk RNA-seq data

Language: Jupyter Notebook - Size: 846 KB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 1

EliasFink122/Surface_SAXS

Simulate and analyse surface probe small angle xray scattering experiments.

Language: Python - Size: 27.1 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

Honchkrow/Deconer

Deconer: A Comprehensive and Systematic Cell Type Deconvolution Evaluator

Language: R - Size: 69.5 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

FerreolS/tipi4icy

tipi4icy is a collection of Icy plugins based on TiPi

Language: Java - Size: 2.2 MB - Last synced at: about 1 month ago - Pushed at: almost 2 years ago - Stars: 11 - Forks: 2

LieberInstitute/deconvo_lute-paper

Contains analysis for the lute software paper

Language: HTML - Size: 548 MB - Last synced at: about 2 months ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0

bwmeyers/tauclean

Python implementation of pulse profile scattering deconvolution

Language: Python - Size: 1.09 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 1

csgroen/deconverse

Bulk RNA-seq deconvolution and benchmarking using single-cell reference profiles

Language: R - Size: 581 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0

cansysbio/ConsensusTME

ConsensusTME Gene Sets and R Script

Language: R - Size: 4.4 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 36 - Forks: 17

pawbz/FocusedBlindDecon.jl

FBD: Multi-channel blind deconvolution with focusing constraints

Language: Julia - Size: 1.52 MB - Last synced at: about 2 months ago - Pushed at: over 1 year ago - Stars: 7 - Forks: 3

bposantos/Circular_Dichroism_Analysis

Analysis of circular dichroism spectra - deconvolution and plotting

Language: Jupyter Notebook - Size: 32.2 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

danilexn/deCU

Fluorescence microscopy deconvolution scripts, using CUDA. DeltaVision and Zeiss Spinning-Disk formats supported.

Language: Python - Size: 150 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

purbayankar/DeepDeconvResUNet

Landslide segmentation using Deep Deconvolutional Residual UNet

Language: Jupyter Notebook - Size: 144 KB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 9 - Forks: 2

zhampel/pyunfold Fork of jrbourbeau/pyunfold

Iterative unfolding in Python

Language: Python - Size: 2.56 MB - Last synced at: over 1 year ago - Pushed at: almost 7 years ago - Stars: 1 - Forks: 0

waydown42/deconvolution-rs

Language: Rust - Size: 208 KB - Last synced at: 12 days ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

Sawera557/Image_Processing_with_OpenCV

This repo is a intermediate to advance level Image processing code examples and guide with open cv in python

Language: Jupyter Notebook - Size: 5.27 MB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 0

digitalcytometry/ecotyper

EcoTyper is a machine learning framework for large-scale identification of cell states and cellular ecosystems from gene expression data.

Language: R - Size: 663 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 151 - Forks: 38