Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub topics: cell-type-deconvolution
az7jh2/SDePER_Analysis
This Github repository holds Notebooks and results of running SDePER on both Simulated and Real datasets, and Notebooks for Figure Panels in manuscript.
Language: HTML - Size: 170 MB - Last synced: 6 days ago - Pushed: 7 days ago - Stars: 1 - Forks: 2
neurogenomics/rare_disease_celltyping
Code, data and results associated with the "Rare diseases cell-typing" project.
Language: HTML - Size: 499 MB - Last synced: 19 days ago - Pushed: about 1 month ago - Stars: 6 - Forks: 0
az7jh2/SDePER
Spatial Deconvolution method with Platform Effect Removal
Language: Python - Size: 599 KB - Last synced: 20 days ago - Pushed: 20 days ago - Stars: 1 - Forks: 1
OpenOmics/cfChIP-seek 📦
cell-free ChIP-seq pipeline
Language: Python - Size: 758 KB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 3 - Forks: 2
namini94/MUSTANG
MUSTANG: reference-free MUlti-sample Spatial Transcriptomics data ANalysis with cross-sample transcriptional similarity Guidance
Language: Python - Size: 3.35 MB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 1 - Forks: 0
WWXkenmo/ENIGMA
A fast and accurate deconvolution algorithm based on regularized matrix completion algorithm (ENIGMA)
Language: HTML - Size: 309 MB - Last synced: 4 months ago - Pushed: 11 months ago - Stars: 25 - Forks: 5
saezlab/DOT
DOT
Language: R - Size: 27.3 MB - Last synced: 12 days ago - Pushed: about 1 month ago - Stars: 4 - Forks: 0
Honchkrow/Deconer
Deconer: A Comprehensive and Systematic Cell Type Deconvolution Evaluator
Language: R - Size: 69.9 MB - Last synced: 11 months ago - Pushed: 11 months ago - Stars: 0 - Forks: 0
