GitHub topics: cell-type-deconvolution
az7jh2/SDePER
Spatial Deconvolution method with Platform Effect Removal
Language: Python - Size: 1.41 MB - Last synced at: 27 days ago - Pushed at: 8 months ago - Stars: 4 - Forks: 1
neurogenomics/rare_disease_celltyping
Code, data and results associated with the "Rare diseases cell-typing" project.
Language: HTML - Size: 768 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 7 - Forks: 0
saezlab/DOT
DOT
Language: R - Size: 27.5 MB - Last synced at: 2 months ago - Pushed at: about 1 year ago - Stars: 8 - Forks: 0
az7jh2/SDePER_Analysis
This Github repository holds data, Notebooks and results of running SDePER on both Simulated and Real datasets, and Notebooks for figure panels in manuscript, as well as the codes for running other cell type deconvolution methods.
Language: HTML - Size: 224 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 1 - Forks: 2
Honchkrow/Deconer
Deconer: A Comprehensive and Systematic Cell Type Deconvolution Evaluator
Language: R - Size: 69.5 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
namini94/MUSTANG
MUSTANG: reference-free MUlti-sample Spatial Transcriptomics data ANalysis with cross-sample transcriptional similarity Guidance
Language: Python - Size: 3.36 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0
OpenOmics/cfChIP-seek 📦
cell-free ChIP-seq pipeline
Language: Python - Size: 758 KB - Last synced at: 10 months ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 3
WWXkenmo/ENIGMA
A fast and accurate deconvolution algorithm based on regularized matrix completion algorithm (ENIGMA)
Language: HTML - Size: 309 MB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 25 - Forks: 5
