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GitHub topics: smfish

fish-quant/big-fish

Toolbox for the analysis of smFISH images.

Language: Python - Size: 12.9 MB - Last synced at: 5 days ago - Pushed at: over 1 year ago - Stars: 59 - Forks: 19

LieberInstitute/TREG

Tools for finding Total RNA Expression Genes in single nucleus RNA-seq data

Language: R - Size: 24.1 MB - Last synced at: 11 days ago - Pushed at: 5 months ago - Stars: 4 - Forks: 2

voduchuy/StMcmcCme

This repository contains the Python modules and scripts to reproduce the results in the paper "Catanach, Vo, Munsky. IJUQ 2020."

Language: Jupyter Notebook - Size: 124 MB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0

fish-quant/fq-imjoy

ImJoy plugins to run different smFISH analysis in a user-friendly setting.

Language: HTML - Size: 15.1 MB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 2 - Forks: 1