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GitHub / arzwa / wgd
Python package and CLI for whole-genome duplication related analyses
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/arzwa%2Fwgd
Stars: 75
Forks: 40
Open Issues: 17
License: gpl-3.0
Language: Python
Repo Size: 72.2 MB
Dependencies:
15
Created: over 6 years ago
Updated: 7 months ago
Last pushed: 7 months ago
Last synced: 7 months ago
Topics: bioinformatics, duplication, evolution, genomics, polyploidy, wgd
Files
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Readme
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Dependencies
setup.py
pypi
- biopython >=1.75
- bokeh ==1.4.0
- click >=7.0
- coloredlogs >=10.0
- ete3 >=3.1
- fastcluster ==1.1.25
- joblib ==0.11
- matplotlib >=3.0.2
- numpy >=1.16
- pandas ==1.2.0
- plumbum >=1.6.7
- progressbar2 >=3.39
- scipy >=1.2
- seaborn >=0.9.0
- sklearn *