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GitHub topics: wgd

heche-psb/wgd Fork of arzwa/wgd

wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication

Language: Python - Size: 188 MB - Last synced: 9 days ago - Pushed: 10 days ago - Stars: 17 - Forks: 0

VIB-PSB/ksrates

ksrates is a tool to position whole-genome duplications relative to speciation events using substitution-rate-adjusted mixed paralog-ortholog Ks distributions.

Language: Python - Size: 39.9 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 14 - Forks: 8

arzwa/wgd

Python package and CLI for whole-genome duplication related analyses

Language: Python - Size: 72.2 MB - Last synced: 7 months ago - Pushed: 8 months ago - Stars: 75 - Forks: 40

arzwa/Whale.jl

Bayesian gene tree reconciliation and WGD inference using amalgamated likelihood estimation

Language: Julia - Size: 4.63 MB - Last synced: over 1 year ago - Pushed: over 1 year ago - Stars: 10 - Forks: 4