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GitHub / cwieder / py-ssPA
Single sample pathway analysis tools for omics data
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cwieder%2Fpy-ssPA
Stars: 9
Forks: 4
Open Issues: 0
License: gpl-3.0
Language: Jupyter Notebook
Repo Size: 8.05 MB
Dependencies:
22
Created: over 2 years ago
Updated: 2 months ago
Last pushed: about 2 months ago
Last synced: 10 days ago
Commit Stats
Commits: 196
Authors: 5
Mean commits per author: 39.2
Development Distribution Score: 0.051
More commit stats: https://commits.ecosyste.ms/hosts/GitHub/repositories/cwieder/py-ssPA
Topics: bioinformatics, identifier-mapping, metabolomics, omics, pathway-analysis, pathway-databases, pathway-enrichment-analysis
Files
Dependencies
- numpy >=1.21.4
- pandas >=1.3.5
- requests >=2.26.0
- rpy2 >=3.4.5
- scikit-learn >=1.0.1
- scipy >=1.7.3
- setuptools >=58.0.4
- sspa >=0.1.0
- statsmodels >=0.13.1
- actions/checkout v3 composite
- actions/setup-python v4 composite
- actions/checkout v3 composite
- actions/setup-python v4 composite
- gseapy *
- numpy *
- pandas *
- requests *
- scikit-learn *
- scipy *
- setuptools *
- sspa *
- statsmodels *