Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub / hexylena / galaxy
Data intensive biology for everyone.
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hexylena%2Fgalaxy
Fork of galaxyproject/galaxy
Stars: 1
Forks: 1
Open Issues: 0
License: other
Language: Python
Repo Size: 629 MB
Dependencies:
2,740
Created: about 9 years ago
Updated: about 2 years ago
Last pushed: about 1 month ago
Last synced: 22 days ago
Files
Loading...
Readme
Loading...
Dependencies
requirements.txt
pypi
- a2wsgi ==1.4.0
- adal ==1.2.7
- aiofiles ==0.8.0
- amqp ==5.0.9
- anyio ==3.5.0
- appdirs ==1.4.4
- argcomplete ==2.0.0
- asgiref ==3.5.0
- attmap ==0.13.2
- attrs ==21.4.0
- babel ==2.9.1
- bagit ==1.8.1
- bagit-profile ==1.3.1
- bcrypt ==3.2.0
- bdbag ==1.6.3
- beaker ==1.11.0
- billiard ==3.6.4.0
- bioblend ==0.16.0
- bleach ==4.1.0
- boltons ==21.0.0
- boto ==2.49.0
- bx-python ==0.8.13
- cachecontrol ==0.12.10
- cached-property ==1.5.2
- celery ==5.2.3
- certifi ==2021.10.8
- cffi ==1.15.0
- charset-normalizer ==2.0.11
- cheetah3 ==3.2.6.post1
- circus ==0.17.1
- click ==8.0.3
- click-didyoumean ==0.3.0
- click-plugins ==1.1.1
- click-repl ==0.2.0
- cloudauthz ==0.6.0
- cloudbridge ==3.0.0
- colorama ==0.4.4
- coloredlogs ==15.0.1
- commonmark ==0.9.1
- cryptography ==36.0.1
- cwltool ==3.1.20211107152837
- decorator ==5.1.1
- defusedxml ==0.7.1
- deprecation ==2.1.0
- dictobj ==0.4
- docopt ==0.6.2
- docutils ==0.16
- ecdsa ==0.17.0
- edam-ontology ==1.25.2
- fabric3 ==1.14.post1
- fastapi ==0.73.0
- fastapi-utils ==0.2.1
- fs ==2.4.15
- funcsigs ==1.0.2
- future ==0.18.2
- galaxy-sequence-utils ==1.1.5
- greenlet ==1.1.2
- gunicorn ==20.1.0
- gxformat2 ==0.15.0
- h11 ==0.12.0
- h5py ==3.6.0
- humanfriendly ==10.0
- idna ==3.3
- importlib-metadata ==4.11.0
- importlib-resources ==5.4.0
- isa-rwval ==0.10.10
- isodate ==0.6.1
- jsonschema ==4.4.0
- kombu ==5.2.3
- lagom ==1.7.0
- lockfile ==0.12.2
- lxml ==4.7.1
- mako ==1.1.6
- markdown ==3.3.6
- markupsafe ==2.0.1
- mercurial ==6.0.2
- mistune ==0.8.4
- mrcfile ==1.3.0
- msgpack ==1.0.3
- mypy-extensions ==0.4.3
- networkx ==2.5
- nodeenv ==1.6.0
- nose ==1.3.7
- numpy ==1.21.1
- oauthlib ==3.2.0
- oyaml ==1.0
- packaging ==21.3
- paramiko ==2.9.2
- parsley ==1.3
- paste ==3.5.0
- pastedeploy ==2.1.1
- pbr ==5.8.1
- prompt-toolkit ==3.0.28
- prov ==1.5.1
- psutil ==5.9.0
- pulsar-galaxy-lib ==0.14.13
- py ==1.11.0
- pyasn1 ==0.4.8
- pycparser ==2.21
- pycryptodome ==3.14.1
- pydantic ==1.9.0
- pydot ==1.4.2
- pyeventsystem ==0.1.0
- pyfaidx ==0.6.4
- pygments ==2.11.2
- pyjwt ==2.3.0
- pykwalify ==1.8.0
- pynacl ==1.5.0
- pyparsing ==3.0.7
- pyreadline ==2.1
- pyreadline3 ==3.4.1
- pyrsistent ==0.18.1
- pysam ==0.18.0
- python-dateutil ==2.8.2
- python-jose ==3.3.0
- python-multipart ==0.0.5
- python3-openid ==3.2.0
- pytz ==2021.3
- pyuwsgi ==2.0.20
- pyyaml ==6.0
- pyzmq ==22.3.0
- rdflib ==6.0.2
- refgenconf ==0.12.2
- repoze.lru ==0.7
- requests ==2.27.1
- requests-oauthlib ==1.3.1
- requests-toolbelt ==0.9.1
- rich ==11.2.0
- routes ==2.5.1
- rsa ==4.8
- ruamel.yaml ==0.17.17
- ruamel.yaml.clib ==0.2.6
- schema-salad ==8.2.20220204150214
- setuptools-scm ==5.0.2
- shellescape ==3.8.1
- six ==1.16.0
- sniffio ==1.2.0
- social-auth-core ==4.0.3
- sortedcontainers ==2.4.0
- sqlalchemy ==1.4.31
- sqlalchemy-migrate ==0.13.0
- sqlitedict ==1.7.0
- sqlparse ==0.4.2
- starlette ==0.17.1
- starlette-context ==0.3.3
- supervisor ==4.2.4
- svgwrite ==1.4.1
- tempita ==0.5.2
- tenacity ==8.0.1
- tifffile ==2021.11.2
- tornado ==6.1
- tqdm ==4.62.3
- tuswsgi ==0.5.4
- typing-extensions ==4.0.1
- tzlocal ==2.1
- ubiquerg ==0.6.2
- urllib3 ==1.26.8
- uvicorn ==0.17.4
- uvloop ==0.16.0
- vine ==5.0.0
- wcwidth ==0.2.5
- webencodings ==0.5.1
- webob ==1.8.7
- whoosh ==2.7.4
- yacman ==0.8.4
- zipp ==3.7.0
- zipstream-new ==1.1.8
.github/workflows/api_paste.yaml
actions
- actions/cache v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- actions/upload-artifact v2 composite
- codecov/codecov-action v2 composite
- postgres 9.6 docker
- actions-hub/docker master composite
- actions-hub/docker/login master composite
- actions/checkout v2 composite
- actions/checkout v2 composite
- github/codeql-action/analyze v1 composite
- github/codeql-action/autobuild v1 composite
- github/codeql-action/init v1 composite
- actions/cache v1 composite
- actions/checkout v2 composite
- actions/setup-python v1 composite
- actions/upload-artifact v2 composite
- actions/cache v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- actions/upload-artifact v2 composite
- codecov/codecov-action v2 composite
- postgres 13 docker
- actions/cache v2 composite
- actions/cache v1 composite
- actions/checkout v2 composite
- actions/setup-python v1 composite
- postgres ${{ matrix.postgresql-version }} docker
- actions/cache v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- peter-evans/create-pull-request v3 composite
.github/workflows/docs.yaml
actions
- actions/cache v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- actions/cache v2 composite
- actions/cache v1 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- mvdbeek/gha-yarn-cache master composite
.github/workflows/framework.yaml
actions
- actions/cache v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- actions/upload-artifact v2 composite
- codecov/codecov-action v2 composite
- postgres 13 docker
- CodingNagger/minikube-setup-action v1.0.3 composite
- actions/cache v2 composite
- actions/cache v1 composite
- actions/checkout v2 composite
- actions/setup-python v1 composite
- actions/upload-artifact v2 composite
- codecov/codecov-action v2 composite
- postgres 13 docker
- rabbitmq * docker
- actions/cache v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- actions/upload-artifact v2 composite
- codecov/codecov-action v2 composite
- mvdbeek/gha-yarn-cache master composite
- nanasess/setup-chromedriver master composite
- postgres 13 docker
.github/workflows/jest.yaml
actions
- actions/checkout v2 composite
- actions/setup-node v2 composite
- actions/github-script v3 composite
.github/workflows/lint.yaml
actions
- actions/cache v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- jamescurtin/isort-action master composite
- psf/black stable composite
- actions/github-script v3 composite
- actions/labeler main composite
.github/workflows/mulled.yaml
actions
- actions/cache v2 composite
- actions/cache v1 composite
- actions/checkout v2 composite
- actions/setup-python v1 composite
- actions/upload-artifact v2 composite
- actions/cache v2 composite
- actions/cache v1 composite
- actions/checkout v2 composite
- conda-incubator/setup-miniconda v2 composite
- actions/cache v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- actions/upload-artifact v2 composite
- postgres 13 docker
- actions/cache v2 composite
- actions/cache v1 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- mvdbeek/gha-yarn-cache master composite
.github/workflows/selenium.yaml
actions
- actions/cache v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- actions/upload-artifact v2 composite
- codecov/codecov-action v2 composite
- mvdbeek/gha-yarn-cache master composite
- nanasess/setup-chromedriver master composite
- postgres 13 docker
- actions/cache v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- actions/upload-artifact v2 composite
- codecov/codecov-action v2 composite
- mvdbeek/gha-yarn-cache master composite
- nanasess/setup-chromedriver master composite
- postgres 13 docker
- actions/checkout v2 composite
.github/workflows/toolshed.yaml
actions
- actions/cache v2 composite
- actions/cache v1 composite
- actions/checkout v2 composite
- actions/setup-python v1 composite
- actions/upload-artifact v2 composite
- postgres 13 docker
.github/workflows/unit.yaml
actions
- actions/cache v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- actions/upload-artifact v2 composite
- codecov/codecov-action v2 composite
client/Dockerfile
docker
- digitallyseamless/nodejs-bower-grunt latest build
- python 3.6.8-slim build
- node 0.11.13 build
- python 2.7 build
- @babel/core ^7.17.0 development
- @babel/eslint-parser ^7.17.0 development
- @babel/helper-validator-identifier ^7.16.7 development
- @babel/plugin-syntax-dynamic-import ^7.8.3 development
- @babel/plugin-transform-runtime ^7.17.0 development
- @babel/preset-env ^7.16.11 development
- @cerner/duplicate-package-checker-webpack-plugin ^2.1.0 development
- @testing-library/jest-dom ^5.16.2 development
- @vue/test-utils ^1.3.0 development
- @vue/vue2-jest ^27.0.0-alpha.4 development
- amdi18n-loader ^0.9.3 development
- autoprefixer ^10.4.2 development
- axios-mock-adapter ^1.20.0 development
- babel-core ^7.0.0-bridge.0 development
- babel-jest ^27.4.6 development
- babel-loader ^8.2.3 development
- babel-plugin-transform-inline-environment-variables ^0.4.3 development
- babel-plugin-transform-vue-template ^0.4.2 development
- buffer ^6.0.3 development
- chai ^4.3.6 development
- css-loader ^6.6.0 development
- css-minimizer-webpack-plugin ^3.4.1 development
- del ^6.0.0 development
- eslint ^8.8.0 development
- eslint-plugin-vue ^8.4.1 development
- expose-loader ^3.1.0 development
- gulp ^4.0.2 development
- ignore-loader ^0.1.2 development
- imports-loader ^3.1.1 development
- jest ^27.4.7 development
- jest-raw-loader ^1.0.1 development
- jest-transform-yaml 1.0.0 development
- json-loader ^0.5.7 development
- karma ^6.3.14 development
- karma-chrome-launcher ^3.1.0 development
- karma-polyfill ^1.1.0 development
- karma-qunit ^4.1.2 development
- karma-webpack ^5.0.0 development
- mini-css-extract-plugin ^2.5.3 development
- postcss-loader ^6.2.1 development
- prettier ^2.5.1 development
- process ^0.11.10 development
- qunit ^2.17.2 development
- raw-loader ^4.0.2 development
- sass ^1.49.7 development
- sass-loader ^12.4.0 development
- sinon ^13.0.1 development
- store ^2.0.12 development
- style-loader ^3.3.1 development
- uuid ^8.3.2 development
- vue-loader ^15.9.8 development
- vue-template-compiler ^2.6.14 development
- webpack ^5.68.0 development
- webpack-cli ^4.9.2 development
- webpack-dev-server ^4.7.4 development
- webpack-merge ^5.8.0 development
- yaml-loader ^0.6.0 development
- @fortawesome/fontawesome-free ^5.15.4
- @fortawesome/fontawesome-svg-core ^1.2.36
- @fortawesome/free-brands-svg-icons ^5.15.4
- @fortawesome/free-regular-svg-icons ^5.15.4
- @fortawesome/free-solid-svg-icons ^5.15.4
- @fortawesome/vue-fontawesome ^2.0.6
- @galaxyproject/bootstrap-tour ^0.12.1
- @handsontable/vue ^2.0.0-beta1
- @hirez_io/observer-spy ^2.1.2
- @johmun/vue-tags-input ^2.1.0
- @sentry/browser ^6.17.4
- assert ^2.0.0
- axios ^0.25.0
- babel-runtime ^6.26.0
- backbone 1.4.0
- bootstrap 4.6
- bootstrap-vue ^2.21.2
- citation-js ^0.5.5
- core-js ^3.21.0
- d3 3
- date-fns ^2.28.0
- decode-uri-component ^0.2.0
- deep-diff ^1.0.2
- deep-equal ^2.0.5
- dom-to-image ^2.6.0
- elkjs ^0.7.1
- file-saver ^2.0.5
- flush-promises ^1.0.2
- glob ^7.2.0
- handsontable ^2.0.0
- imask ^6.4.0
- in-viewport ^3.6.0
- is-promise ^4.0.0
- isotope-layout ^3.0.6
- iter-tools 7.2.0
- jquery 2
- jquery-migrate ~1.4
- jquery-mousewheel ^3.1.13
- jquery-ui ^1.13.1
- jquery.cookie ^1.4.1
- jspdf ^2.5.1
- linkify-html ^3.0.5
- linkifyjs ^3.0.5
- localforage ^1.10.0
- markdown-it ^12.3.2
- markdown-it-regexp ^0.4.0
- moment 2.29.1
- object-hash ^2.2.0
- popper.js ^1.16.1
- pretty-bytes ^5.6.0
- proper-skip-list ^4.1.0
- pyre-to-regexp ^0.0.5
- querystring-es3 ^0.2.1
- regenerator-runtime ^0.13.9
- regression ^2.0.1
- requirejs 2.3.6
- rxjs ^7.5.2
- rxjs-spy ^8.0.2
- rxjs-spy-devtools-plugin ^0.0.4
- slugify ^1.6.5
- snake-case ^3.0.4
- splitpanes 2.3.8
- stream-browserify ^3.0.0
- threads ^1.7.0
- timers-browserify ^2.0.12
- toastr ^2.1.4
- tus-js-client ^2.3.0
- underscore ^1.13.2
- underscore.string ^3.3.6
- util ^0.12.4
- vue ^2.6.14
- vue-infinite-scroll ^2.0.2
- vue-multiselect ^2.1.6
- vue-observe-visibility ^1.0.0
- vue-prismjs ^1.2.0
- vue-router ^3.5.3
- vue-rx ^6.2.0
- vue-scrollto ^2.20.0
- vuedraggable 2.24.3
- vueisotope ^3.1.2
- vuex ^3.6.2
- vuex-cache ^3.4.0
- vuex-persist 2.3
- xml-beautifier ^0.5.0
.github/workflows/api.yaml
actions
- actions/cache v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- actions/upload-artifact v2 composite
- codecov/codecov-action v2 composite
- postgres 13 docker
- babel-preset-env ^1.6.1
- backbone ^1.3.3
- jquery ^3.3.1
- jquery-contextmenu ^2.7.1
- jquery.ui.position ^1.11.4
- paper ^0.12.3
- parcel-bundler ^1.4.1
- underscore ^1.8.3
- copy-webpack-plugin ^5.1.1 development
- css-loader ^3.4.2 development
- file ^0.2.2 development
- file-loader ^5.0.2 development
- mini-css-extract-plugin ^0.9.0 development
- script-loader ^0.7.2 development
- system ^2.0.1 development
- url-loader ^4.0.0 development
- webpack ^4.42.1 development
- webpack-cli ^3.3.11 development
- bootstrap 3.3.7
- font-awesome ^4.7.0
- jquery 3.2.1
- plotly.js ^1.52.3
- underscore 1.8.3
- babel-preset-env ^1.6.1
- backbone ^1.3.3
- bootstrap ^3.3.7
- cytoscape ^3.2.8
- jquery ^3.1.1
- parcel-bundler ^1.4.1
- babel-preset-env ^1.6.1
- backbone ^1.3.3
- bootstrap ^3.3.7
- drawrnajs ^1.2.6
- jquery ^3.1.1
- parcel-bundler ^1.4.1
- css-loader ^3.4.2 development
- extract-text-webpack-plugin ^3.0.2 development
- file-loader ^5.0.2 development
- mini-css-extract-plugin ^0.9.0 development
- style-loader ^1.1.3 development
- webpack ^4.41.6 development
- webpack-cli ^3.3.11 development
- ace-builds ^1.4.8
- @galaxyproject/charts ^0.0.6
- babel-preset-env ^1.6.1
- backbone ^1.3.3
- bootstrap ^3.3.7
- d3 ^4.12.2
- jquery ^3.1.1
- parcel-bundler ^1.4.1
- underscore ^1.8.3
- @galaxyproject/charts ^0.0.6
- babel-preset-env ^1.6.1
- backbone ^1.4.0
- bootstrap ^3.3.7
- d3 3
- jquery ^3.5.1
- parcel-bundler ^1.4.1
- underscore ^1.11.0
- css-loader ^3.4.2 development
- expose-loader ^0.7.5 development
- file-loader ^5.0.2 development
- hyphy-vision 2.6.3 development
- mini-css-extract-plugin ^0.9.0 development
- phylotree 0.1.6 development
- style-loader ^1.1.3 development
- webpack ^4.41.6 development
- webpack-cli ^3.3.11 development
- fbjs ^1.0.0
- underscore ^1.9.2
- @galaxyproject/charts ^0.0.6
- babel-preset-env ^1.6.1
- backbone ^1.3.3
- bootstrap ^3.3.7
- d3 ^4.12.2
- jqplot-exported ^1.0.9-pm.9
- jquery ^3.1.1
- parcel-bundler ^1.4.1
- underscore ^1.13.1
- babel-plugin-transform-export-extensions ^6.22.0
- babel-preset-env ^1.6.1
- backbone ^1.3.3
- bootstrap ^3.3.7
- es2015 0.0.0
- jquery ^3.1.1
- msa ^1.0.3
- parcel-bundler ^1.4.1
- clean-webpack-plugin ^3.0.0 development
- copy-webpack-plugin ^6.0.3 development
- css-loader ^3.4.2 development
- extract-text-webpack-plugin ^3.0.2 development
- file ^0.2.2 development
- file-loader ^5.0.2 development
- mini-css-extract-plugin ^0.9.0 development
- script-loader ^0.7.2 development
- style-loader ^1.2.0 development
- system ^2.0.1 development
- url-loader ^4.0.0 development
- webpack ^4.42.1 development
- webpack-cli ^3.3.11 development
- bootstrap 3
- igv ^2.6.6
- babel-preset-env ^1.6.1
- backbone ^1.3.3
- bootstrap ^3.3.7
- jquery ^3.1.1
- ngl ^0.10.4
- parcel-bundler ^1.4.1
- @galaxyproject/nora 1.1.2
- cpy-cli ^3.1.1
- babel-core ^6.26.3 development
- @galaxyproject/charts ^0.0.6
- babel-preset-env ^1.6.1
- backbone ^1.3.3
- bootstrap ^3.3.7
- d3 ^3.4.5
- jquery ^3.3.1
- nvd3 ^1.8.6
- parcel-bundler ^1.4.1
- underscore ^1.8.3
- axios ^0.19.0
- babel-preset-env ^1.6.1
- backbone ^1.3.3
- bootstrap ^3.3.7
- file-saver ^2.0.2
- jquery ^3.3.1
- jszip ^3.2.2
- jszip-utils ^0.1.0
- ol ^5.3.3
- parcel-bundler ^1.4.1
- proj4 ^2.5.0
- shpjs ^3.4.3
- underscore ^1.8.3
- cpy-cli ^3.1.1
- openseadragon ^2.4.2
- babel-preset-env ^1.6.1
- backbone ^1.3.3
- bootstrap ^3.3.7
- jquery ^3.1.1
- parcel-bundler ^1.4.1
- phylocanvas ^2.8.1
- bio-pv ^1.8.1
- parcel-bundler ^1.12.4
- babel-core ^6.26.3 development
- babel-plugin-auto-import ^0.7.1
- babel-preset-env ^1.6.1
- backbone ^1.3.3
- bootstrap ^3.3.7
- d3 ^3.5.17
- jquery ^3.2.1
- jquery-ui-bundle ^1.12.1-migrate
- parcel-bundler ^1.6.2
- underscore ^1.8.3
- @galaxyproject/charts ^0.0.6
- babel-preset-env ^1.6.1
- backbone ^1.3.3
- bootstrap ^3.3.7
- d3 ^3.4.5
- jquery ^3.1.1
- parcel-bundler ^1.4.1
- underscore ^1.13.1
- backbone ^1.3.3
- parcel-bundler ^1.10.3
- toastr ^2.1.4
- copy-webpack-plugin ^6.0.3 development
- css-loader ^3.4.2 development
- expose-loader ^0.7.5 development
- file-loader ^5.0.2 development
- mini-css-extract-plugin ^0.9.0 development
- style-loader ^1.1.3 development
- webpack ^4.41.6 development
- webpack-cli ^3.3.11 development
- @galaxyproject/new_user_welcome ^1.0.6
- fbjs ^1.0.0
- underscore ^1.9.2
- commander ~2.20.3
- eventemitter3 3.1.2
- http-proxy 1.18.1
- node-watch 0.7.0
- sqlite3 4.2.0
- azure-storage ==0.32.0
- chronos-python ==1.2.1
- custos-sdk *
- docker *
- drmaa *
- fluent-logger *
- fs-basespace *
- fs-gcsfs *
- fs-onedatafs *
- fs-s3fs *
- fs.anvilfs *
- fs.dropboxfs *
- fs.googledrivefs *
- fs.sshfs *
- fs.webdavfs >=0.4.2
- galaxycloudrunner *
- hvac *
- influxdb *
- kamaki *
- mysqlclient *
- pbs_python *
- psycopg2-binary ==2.9.1
- pygithub *
- pykube ==0.15.0
- python-gitlab >=2.10.0
- python-irodsclient ==1.0.0
- python-ldap ==3.4.0
- python-pam *
- s3fs *
- sentry-sdk *
- statsd *
- tensorflow ==2.5.3
- watchdog *
- weasyprint *
- a2wsgi ==1.4.0 development
- adal ==1.2.7 development
- aiofiles ==0.8.0 development
- alabaster ==0.7.12 development
- amqp ==5.0.9 development
- anyio ==3.5.0 development
- appdirs ==1.4.4 development
- argcomplete ==2.0.0 development
- asgiref ==3.5.0 development
- async-generator ==1.10 development
- atomicwrites ==1.4.0 development
- attmap ==0.13.2 development
- attrs ==21.4.0 development
- babel ==2.9.1 development
- bagit ==1.8.1 development
- bagit-profile ==1.3.1 development
- bcrypt ==3.2.0 development
- bdbag ==1.6.3 development
- beaker ==1.11.0 development
- billiard ==3.6.4.0 development
- bioblend ==0.16.0 development
- black ==22.1.0 development
- bleach ==4.1.0 development
- boltons ==21.0.0 development
- boto ==2.49.0 development
- bx-python ==0.8.13 development
- cachecontrol ==0.12.10 development
- cached-property ==1.5.2 development
- celery ==5.2.3 development
- certifi ==2021.10.8 development
- cffi ==1.15.0 development
- charset-normalizer ==2.0.11 development
- cheetah3 ==3.2.6.post1 development
- circus ==0.17.1 development
- click ==8.0.3 development
- click-didyoumean ==0.3.0 development
- click-plugins ==1.1.1 development
- click-repl ==0.2.0 development
- cloudauthz ==0.6.0 development
- cloudbridge ==3.0.0 development
- colorama ==0.4.4 development
- coloredlogs ==15.0.1 development
- commonmark ==0.9.1 development
- coverage ==6.3.1 development
- cryptography ==36.0.1 development
- cwltest ==2.2.20210901154959 development
- cwltool ==3.1.20211107152837 development
- darker ==1.4.0 development
- decorator ==5.1.1 development
- defusedxml ==0.7.1 development
- deprecated ==1.2.13 development
- deprecation ==2.1.0 development
- dictobj ==0.4 development
- docopt ==0.6.2 development
- docutils ==0.16 development
- ecdsa ==0.17.0 development
- edam-ontology ==1.25.2 development
- fabric3 ==1.14.post1 development
- fastapi ==0.73.0 development
- fastapi-utils ==0.2.1 development
- fluent-logger ==0.10.0 development
- fs ==2.4.15 development
- funcsigs ==1.0.2 development
- future ==0.18.2 development
- galaxy-sequence-utils ==1.1.5 development
- greenlet ==1.1.2 development
- gunicorn ==20.1.0 development
- gxformat2 ==0.15.0 development
- h11 ==0.12.0 development
- h5py ==3.6.0 development
- httpcore ==0.14.7 development
- httpx ==0.22.0 development
- humanfriendly ==10.0 development
- idna ==3.3 development
- imagesize ==1.3.0 development
- importlib-metadata ==4.11.0 development
- importlib-resources ==5.4.0 development
- iniconfig ==1.1.1 development
- isa-rwval ==0.10.10 development
- isodate ==0.6.1 development
- isort ==5.10.1 development
- jinja2 ==3.0.3 development
- jsonschema ==4.4.0 development
- junit-xml ==1.9 development
- kombu ==5.2.3 development
- lagom ==1.7.0 development
- lockfile ==0.12.2 development
- lxml ==4.7.1 development
- mako ==1.1.6 development
- markdown ==3.3.6 development
- markdown-it-reporter ==0.0.2 development
- markupsafe ==2.0.1 development
- mercurial ==6.0.2 development
- mirakuru ==2.4.2 development
- mistune ==0.8.4 development
- mrcfile ==1.3.0 development
- msgpack ==1.0.3 development
- mypy-extensions ==0.4.3 development
- networkx ==2.5 development
- nodeenv ==1.6.0 development
- nose ==1.3.7 development
- nosehtml ==0.4.6 development
- numpy ==1.21.1 development
- oauthlib ==3.2.0 development
- outcome ==1.1.0 development
- oyaml ==1.0 development
- packaging ==21.3 development
- paramiko ==2.9.2 development
- parsley ==1.3 development
- paste ==3.5.0 development
- pastedeploy ==2.1.1 development
- pathspec ==0.9.0 development
- pbr ==5.8.1 development
- platformdirs ==2.5.0 development
- pluggy ==1.0.0 development
- port-for ==0.6.1 development
- prettytable ==3.0.0 development
- prompt-toolkit ==3.0.28 development
- prov ==1.5.1 development
- psutil ==5.9.0 development
- pulsar-galaxy-lib ==0.14.13 development
- py ==1.11.0 development
- pyasn1 ==0.4.8 development
- pycparser ==2.21 development
- pycryptodome ==3.14.1 development
- pydantic ==1.9.0 development
- pydot ==1.4.2 development
- pyeventsystem ==0.1.0 development
- pyfaidx ==0.6.4 development
- pygithub ==1.55 development
- pygments ==2.11.2 development
- pyjwt ==2.3.0 development
- pykwalify ==1.8.0 development
- pynacl ==1.5.0 development
- pyopenssl ==22.0.0 development
- pyparsing ==3.0.7 development
- pyreadline ==2.1 development
- pyreadline3 ==3.4.1 development
- pyrsistent ==0.18.1 development
- pysam ==0.18.0 development
- pytest ==7.0.1 development
- pytest-asyncio ==0.18.1 development
- pytest-celery ==0.0.0 development
- pytest-cov ==3.0.0 development
- pytest-html ==3.1.1 development
- pytest-json-report ==1.4.1 development
- pytest-metadata ==1.11.0 development
- pytest-mock ==3.7.0 development
- pytest-postgresql ==4.1.0 development
- pytest-shard ==0.1.2 development
- python-dateutil ==2.8.2 development
- python-irodsclient ==1.1.1 development
- python-jose ==3.3.0 development
- python-multipart ==0.0.5 development
- python3-openid ==3.2.0 development
- pytz ==2021.3 development
- pyuwsgi ==2.0.20 development
- pyyaml ==6.0 development
- pyzmq ==22.3.0 development
- rdflib ==6.0.2 development
- recommonmark ==0.7.1 development
- refgenconf ==0.12.2 development
- repoze.lru ==0.7 development
- requests ==2.27.1 development
- requests-oauthlib ==1.3.1 development
- requests-toolbelt ==0.9.1 development
- responses ==0.18.0 development
- rfc3986 ==1.5.0 development
- rich ==11.2.0 development
- routes ==2.5.1 development
- rsa ==4.8 development
- ruamel.yaml ==0.17.17 development
- ruamel.yaml.clib ==0.2.6 development
- schema-salad ==8.2.20220204150214 development
- selenium ==4.1.0 development
- setuptools-scm ==5.0.2 development
- shellescape ==3.8.1 development
- six ==1.16.0 development
- sniffio ==1.2.0 development
- snowballstemmer ==2.2.0 development
- social-auth-core ==4.0.3 development
- sortedcontainers ==2.4.0 development
- sphinx ==4.4.0 development
- sphinx-markdown-tables ==0.0.15 development
- sphinx-rtd-theme ==1.0.0 development
- sphinxcontrib-applehelp ==1.0.2 development
- sphinxcontrib-devhelp ==1.0.2 development
- sphinxcontrib-htmlhelp ==2.0.0 development
- sphinxcontrib-jsmath ==1.0.1 development
- sphinxcontrib-qthelp ==1.0.3 development
- sphinxcontrib-serializinghtml ==1.1.5 development
- sqlalchemy ==1.4.31 development
- sqlalchemy-migrate ==0.13.0 development
- sqlitedict ==1.7.0 development
- sqlparse ==0.4.2 development
- starlette ==0.17.1 development
- starlette-context ==0.3.3 development
- statsd ==3.3.0 development
- supervisor ==4.2.4 development
- svgwrite ==1.4.1 development
- tempita ==0.5.2 development
- tenacity ==8.0.1 development
- testfixtures ==6.18.3 development
- tifffile ==2021.11.2 development
- tinydb ==4.6.1 development
- toml ==0.10.2 development
- tomli ==2.0.1 development
- tornado ==6.1 development
- tqdm ==4.62.3 development
- trio ==0.19.0 development
- trio-websocket ==0.9.2 development
- tuspy ==0.2.5 development
- tuswsgi ==0.5.4 development
- twill ==3.0.1 development
- typed-ast ==1.5.2 development
- typing-extensions ==4.0.1 development
- tzlocal ==2.1 development
- ubiquerg ==0.6.2 development
- urllib3 ==1.26.8 development
- uvicorn ==0.17.4 development
- uvloop ==0.16.0 development
- vine ==5.0.0 development
- watchdog ==2.1.6 development
- wcwidth ==0.2.5 development
- webencodings ==0.5.1 development
- webob ==1.8.7 development
- whoosh ==2.7.4 development
- wrapt ==1.13.3 development
- wsproto ==1.0.0 development
- yacman ==0.8.4 development
- zipp ==3.7.0 development
- zipstream-new ==1.1.8 development
- flake8 *
- flake8-bugbear *
- mypy ==0.910
- types-Markdown *
- types-PyYAML *
- types-bleach *
- types-boto *
- types-contextvars *
- types-dataclasses *
- types-docutils *
- types-paramiko *
- types-pkg-resources *
- types-python-dateutil *
- types-requests *
- types-six *
- attrs ==21.4.0
- flake8 ==4.0.1
- flake8-bugbear ==22.1.11
- importlib-metadata ==4.2.0
- mccabe ==0.6.1
- mypy ==0.910
- mypy-extensions ==0.4.3
- pycodestyle ==2.8.0
- pyflakes ==2.4.0
- toml ==0.10.2
- typed-ast ==1.4.3
- types-Markdown ==3.3.12
- types-PyYAML ==6.0.4
- types-bleach ==4.1.4
- types-boto ==2.49.7
- types-contextvars ==2.4.2
- types-cryptography ==3.3.15
- types-dataclasses ==0.6.4
- types-docutils ==0.17.5
- types-enum34 ==1.1.8
- types-ipaddress ==1.0.8
- types-paramiko ==2.8.13
- types-pkg-resources ==0.1.3
- types-python-dateutil ==2.8.9
- types-requests ==2.27.9
- types-six ==1.16.10
- types-urllib3 ==1.26.9
- typing_extensions ==4.0.1
- zipp ==3.7.0
- a2wsgi ==1.4.0
- adal ==1.2.7
- aiofiles ==0.8.0
- amqp ==5.0.9
- anyio ==3.5.0
- appdirs ==1.4.4
- argcomplete ==2.0.0
- asgiref ==3.5.0
- attmap ==0.13.2
- attrs ==21.4.0
- babel ==2.9.1
- bagit ==1.8.1
- bagit-profile ==1.3.1
- bcrypt ==3.2.0
- bdbag ==1.6.3
- beaker ==1.11.0
- billiard ==3.6.4.0
- bioblend ==0.16.0
- bleach ==4.1.0
- boltons ==21.0.0
- boto ==2.49.0
- bx-python ==0.8.13
- cachecontrol ==0.12.10
- cached-property ==1.5.2
- celery ==5.2.3
- certifi ==2021.10.8
- cffi ==1.15.0
- charset-normalizer ==2.0.11
- cheetah3 ==3.2.6.post1
- circus ==0.17.1
- click ==8.0.3
- click-didyoumean ==0.3.0
- click-plugins ==1.1.1
- click-repl ==0.2.0
- cloudauthz ==0.6.0
- cloudbridge ==3.0.0
- colorama ==0.4.4
- coloredlogs ==15.0.1
- commonmark ==0.9.1
- cryptography ==36.0.1
- cwltool ==3.1.20211107152837
- decorator ==5.1.1
- defusedxml ==0.7.1
- deprecation ==2.1.0
- dictobj ==0.4
- docopt ==0.6.2
- docutils ==0.16
- ecdsa ==0.17.0
- edam-ontology ==1.25.2
- fabric3 ==1.14.post1
- fastapi ==0.73.0
- fastapi-utils ==0.2.1
- fs ==2.4.15
- funcsigs ==1.0.2
- future ==0.18.2
- galaxy-sequence-utils ==1.1.5
- greenlet ==1.1.2
- gunicorn ==20.1.0
- gxformat2 ==0.15.0
- h11 ==0.12.0
- h5py ==3.6.0
- humanfriendly ==10.0
- idna ==3.3
- importlib-metadata ==4.11.0
- importlib-resources ==5.4.0
- isa-rwval ==0.10.10
- isodate ==0.6.1
- jsonschema ==4.4.0
- kombu ==5.2.3
- lagom ==1.7.0
- lockfile ==0.12.2
- lxml ==4.7.1
- mako ==1.1.6
- markdown ==3.3.6
- markupsafe ==2.0.1
- mercurial ==6.0.2
- mistune ==0.8.4
- mrcfile ==1.3.0
- msgpack ==1.0.3
- mypy-extensions ==0.4.3
- networkx ==2.5
- nodeenv ==1.6.0
- nose ==1.3.7
- numpy ==1.21.1
- oauthlib ==3.2.0
- oyaml ==1.0
- packaging ==21.3
- paramiko ==2.9.2
- parsley ==1.3
- paste ==3.5.0
- pastedeploy ==2.1.1
- pbr ==5.8.1
- prompt-toolkit ==3.0.28
- prov ==1.5.1
- psutil ==5.9.0
- pulsar-galaxy-lib ==0.14.13
- py ==1.11.0
- pyasn1 ==0.4.8
- pycparser ==2.21
- pycryptodome ==3.14.1
- pydantic ==1.9.0
- pydot ==1.4.2
- pyeventsystem ==0.1.0
- pyfaidx ==0.6.4
- pygments ==2.11.2
- pyjwt ==2.3.0
- pykwalify ==1.8.0
- pynacl ==1.5.0
- pyparsing ==3.0.7
- pyreadline ==2.1
- pyreadline3 ==3.4.1
- pyrsistent ==0.18.1
- pysam ==0.18.0
- python-dateutil ==2.8.2
- python-jose ==3.3.0
- python-multipart ==0.0.5
- python3-openid ==3.2.0
- pytz ==2021.3
- pyuwsgi ==2.0.20
- pyyaml ==6.0
- pyzmq ==22.3.0
- rdflib ==6.0.2
- refgenconf ==0.12.2
- repoze.lru ==0.7
- requests ==2.27.1
- requests-oauthlib ==1.3.1
- requests-toolbelt ==0.9.1
- rich ==11.2.0
- routes ==2.5.1
- rsa ==4.8
- ruamel.yaml ==0.17.17
- ruamel.yaml.clib ==0.2.6
- schema-salad ==8.2.20220204150214
- setuptools-scm ==5.0.2
- shellescape ==3.8.1
- six ==1.16.0
- sniffio ==1.2.0
- social-auth-core ==4.0.3
- sortedcontainers ==2.4.0
- sqlalchemy ==1.4.31
- sqlalchemy-migrate ==0.13.0
- sqlitedict ==1.7.0
- sqlparse ==0.4.2
- starlette ==0.17.1
- starlette-context ==0.3.3
- supervisor ==4.2.4
- svgwrite ==1.4.1
- tempita ==0.5.2
- tenacity ==8.0.1
- tifffile ==2021.11.2
- tornado ==6.1
- tqdm ==4.62.3
- tuswsgi ==0.5.4
- typing-extensions ==4.0.1
- tzlocal ==2.1
- ubiquerg ==0.6.2
- urllib3 ==1.26.8
- uvicorn ==0.17.4
- uvloop ==0.16.0
- vine ==5.0.0
- wcwidth ==0.2.5
- webencodings ==0.5.1
- webob ==1.8.7
- whoosh ==2.7.4
- yacman ==0.8.4
- zipp ==3.7.0
- zipstream-new ==1.1.8
- Beaker *
- Fabric3 *
- Mako *
- Markdown *
- PyJWT *
- Whoosh *
- celery *
- cloudauthz ==0.6.0
- galaxy-auth *
- galaxy-data *
- galaxy-job-execution *
- galaxy-job-metrics *
- galaxy-tool-util *
- galaxy-web-framework *
- galaxy-web-stack *
- gxformat2 *
- kombu *
- lagom *
- paramiko *
- pulsar-galaxy-lib >=0.14.13
- pydantic *
- pykwalify *
- refgenconf >=0.12.0
- sqlitedict *
- svgwrite *
- typing-extensions *
- mock-ssh-server * test
- pytest * test
- testfixtures * test
- pytest * test
- pytest * test
- SQLAlchemy >=1.4.25,<2
- WebOb *
- bdbag *
- bx-python *
- contextvars *
- galaxy-files *
- galaxy-objectstore *
- galaxy-sequence-utils *
- galaxy-util *
- h5py *
- isa-rwval *
- mrcfile *
- numpy *
- parsley *
- pycryptodome *
- pydantic *
- pysam *
- social-auth-core ==4.0.3
- sqlalchemy-migrate *
- tifffile <=2020.9.3
- typing-extensions *
- pytest * test
- pytest * test
- pytest * test
- pytest * test
- pytest * test
- pytest * test
- galaxy-test-base * test
- pytest * test
- galaxy-data * test
- nose * test
- pytest * test
- pytest * test
- galaxy-app * test
- galaxy-data * test
- galaxy-test-base * test
- galaxy-tool-util * test
- galaxy-util * test
- galaxy-web-framework * test
- galaxy-webapps * test
- nose * test
- pytest * test
- pyyaml * test
- pytest * test
- pytest * test
- galaxy-containers *
- galaxy-util >=20.1.0.dev0
- lxml *
- pydantic *
- pyyaml *
- sortedcontainers *
- typing-extensions *
- pytest * test
- pytest-mock * test
- MarkupSafe *
- PyYAML *
- Routes *
- bleach *
- boltons *
- docutils *
- packaging *
- pycryptodome *
- requests *
- typing-extensions *
- zipstream-new *
- MarkupSafe *
- Routes *
- SQLAlchemy >=1.4.25,<2
- WebOb *
- babel *
- galaxy-data *
- galaxy-util *
- galaxy-web-stack *
- paste *
- pydantic *
- requests *
- pytest * test
- SQLAlchemy >=1.4.25,<2
- galaxy-util *
- pytest * test
- Babel *
- Cheetah3 *
- Mako *
- MarkupSafe *
- Paste *
- PyJWT *
- PyYAML *
- Routes *
- SQLAlchemy >=1.4.25,<2
- WebOb *
- Whoosh *
- a2wsgi *
- fastapi >=0.68.2,
- fastapi-utils *
- galaxy-app *
- galaxy-data *
- galaxy-job-execution *
- galaxy-tool-util *
- galaxy-util *
- galaxy-web-framework *
- gunicorn *
- gxformat2 *
- importlib_resources *
- pydantic *
- python-dateutil *
- python-multipart *
- requests *
- starlette *
- starlette-context *
- tuswsgi *
- typing-extensions *
- uvicorn *
- uvloop *