Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
Package Usage: pypi: ubiquerg
Various utility functions
28 versions
Latest release: 9 months ago
12 dependent packages
38,405 downloads last month
View more package details: https://packages.ecosyste.ms/registries/pypi.org/packages/ubiquerg
View more repository details: https://repos.ecosyste.ms/hosts/GitHub/repositories/pepkit%2Fubiquerg
Dependent Repos 66
violethaze74/galaxy-eu Fork of galaxyproject/galaxy
Data intensive science for everyone.- ==0.6.1 lib/galaxy/dependencies/dev-requirements.txt
- ==0.6.1 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.1 requirements.txt
Size: 600 MB - Last synced: 29 days ago - Pushed: 8 months ago
pepkit/peppy
Project metadata manager for PEPs in Python- >=0.6.2 requirements/requirements-all.txt
- * requirements/requirements-doc.txt
Size: 2.92 MB - Last synced: 18 days ago - Pushed: 2 months ago
pepkit/ubiquerg
Tools for work (erg) everywhere (ubique)- * requirements/requirements-docs.txt
Size: 176 KB - Last synced: about 1 month ago - Pushed: about 1 month ago
pepkit/eido
Validator for PEP objects- >=0.5.2 requirements/requirements-all.txt
- >=0.6.1 webeido/requirements/requirements-all.txt
Size: 371 KB - Last synced: 12 days ago - Pushed: 2 months ago
pepkit/looper
A job submitter for Portable Encapsulated Projects- >=0.5.2 requirements/requirements-all.txt
Size: 3.86 MB - Last synced: about 2 months ago - Pushed: about 2 months ago
hexylena/galaxy Fork of galaxyproject/galaxy
Data intensive biology for everyone.- ==0.6.2 lib/galaxy/dependencies/dev-requirements.txt
- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 629 MB - Last synced: about 1 month ago - Pushed: about 2 months ago
bgruening/galaxy Fork of galaxyproject/galaxy
Data intensive biology for everyone.- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 647 MB - Last synced: about 1 month ago - Pushed: about 1 month ago
gregvonkuster/galaxy Fork of galaxyproject/galaxy
Data intensive biology for everyone.- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 602 MB - Last synced: about 1 month ago - Pushed: 7 months ago
mvdbeek/galaxy Fork of galaxyproject/galaxy
Data intensive biology for everyone.- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 623 MB - Last synced: about 16 hours ago - Pushed: 1 day ago
guerler/galaxy Fork of galaxyproject/galaxy
Galaxy Github repository BETA 2. May be destroyed and recreated if additional post-conversion problems are found (but post-conversion commits on this repo will be reapplied to any recreations). Full details:- ==0.6.2 lib/galaxy/dependencies/dev-requirements.txt
- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 610 MB - Last synced: 1 day ago - Pushed: 1 day ago
pepkit/pepdbagent
Database for storing sample metadata- >=0.6.2 requirements/requirements-all.txt
Size: 453 KB - Last synced: 13 days ago - Pushed: 3 months ago
databio/yacman
YAML configuration manager- >=0.6.1 requirements/requirements-all.txt
Size: 350 KB - Last synced: 21 days ago - Pushed: 3 months ago
databio/bulker
Manager for multi-container computing environments- >=0.5.1 requirements/requirements-all.txt
Size: 364 KB - Last synced: 21 days ago - Pushed: 5 months ago
linz94/birdcatdetection
- ==0.6.2 requirements.txt
Size: 10.2 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago
naturalis/mtdna-reference-database
Reference database of panels of genomes for population-level aDNA identification- =0.6.2=pyhd8ed1ab_0 doc/environment_requirements.txt
Size: 61.2 MB - Last synced: 2 months ago - Pushed: 9 months ago
pepkit/pipestat
Pipeline results reporting package- >=0.6.1 requirements/requirements-all.txt
Size: 1.03 MB - Last synced: about 1 hour ago - Pushed: about 10 hours ago
pepkit/attmap
Key-value mapping that supports nested attribute-style access- >=0.2.1 requirements/requirements-all.txt
- >=0.3 requirements/requirements-dev.txt
Size: 228 KB - Last synced: 4 days ago - Pushed: 4 days ago
wzuhou/Genome_assembly_annotation
Scripts and pipeine for Genome_assembly_annotation- =0.6.1=pyh9f0ad1d_0 Anno_pipeline/requirements.txt
Size: 108 KB - Last synced: 7 days ago - Pushed: 7 days ago
grycap/ansible-role-galaxy
Ansible Role to install the Galaxy Portal- ==0.5.2 files/requirements.txt
Size: 148 KB - Last synced: 28 days ago - Pushed: over 1 year ago
thomasbtf/snakesite
Interactive execution of Snakemake workflows via a web interface.- =0.6.1=pyh9f0ad1d_0 requirements.txt
Size: 224 KB - Last synced: about 1 year ago - Pushed: almost 3 years ago
pepkit/pephub.databio.org 📦
Data stores for pephub PEPs- ==0.6.2 scripts/requirements.txt
Size: 7.47 MB - Last synced: about 2 months ago - Pushed: 11 months ago
databio/pypiper
Python toolkit for building restartable pipelines- >=0.4.5 requirements/requirements-pypiper.txt
Size: 1.55 MB - Last synced: 7 days ago - Pushed: 7 days ago
databio/markmeld
A Python package for melding markdown content and YAML structured data- * requirements/requirements-all.txt
Size: 910 KB - Last synced: 15 days ago - Pushed: 15 days ago
refgenie/refgenieserver
Serves a web interface and RESTful API for reference genome assets.- >=0.6.1 requirements/requirements-all.txt
Size: 628 KB - Last synced: 4 months ago - Pushed: over 2 years ago
databio/pepatac
A modular, containerized pipeline for ATAC-seq data processing- >=0.6.1 requirements.txt
Size: 21.8 MB - Last synced: 21 days ago - Pushed: 4 months ago
databio/henge
Keeper of DRUIDs: a Python interface to Decomposable Recursive UIDs- >=0.5.2 requirements/requirements-all.txt
Size: 148 KB - Last synced: 4 days ago - Pushed: 4 days ago
CarolinaPB/nanopore-assembly
Pipeline to assemble oxford nanopore long sequencing reads and perform variant calling with long and short reads- =0.6.1=pyh9f0ad1d_0 requirements.txt
Size: 1.55 MB - Last synced: 3 months ago - Pushed: 3 months ago
desouzalab/scRNAClust
- =0.6.1=pyh9f0ad1d_0 requirements.txt
Size: 170 MB - Last synced: about 1 year ago - Pushed: about 2 years ago
pepkit/divvy
Standardized computing resource configuration- >=0.5.0 requirements/requirements-all.txt
Size: 323 KB - Last synced: 19 days ago - Pushed: about 1 year ago
pepkit/pepserver
- ==0.6.1 requirements/requirements-all.txt
- ==0.6.1 requirements.txt
Size: 10.7 KB - Last synced: about 2 months ago - Pushed: over 2 years ago
databio/lucidoc
Automatic python documentation in markdown for mkdocs- >=0.0.5 requirements/requirements-all.txt
- >=0.0.3 requirements/requirements-dev.txt
Size: 170 KB - Last synced: 21 days ago - Pushed: 5 months ago
CarolinaPB/whole-genome-alignment
- =0.6.1=pyh9f0ad1d_0 requirements.txt
Size: 790 KB - Last synced: about 1 year ago - Pushed: almost 2 years ago
xtrojak/galaxy Fork of galaxyproject/galaxy
Data intensive science for everyone.- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 586 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
gonzalosm98/scRNA-SeqAnalysis
- =0.6.1=pyh9f0ad1d_0 requirements.txt
Size: 62.5 KB - Last synced: about 1 year ago - Pushed: over 1 year ago
databio/pararead
Simplifies parallel processing of DNA sequencing reads- >=0.4.5 requirements/requirements.txt
Size: 281 KB - Last synced: 21 days ago - Pushed: 11 months ago
okimototakuya/master-research-tut
- =0.6.1=pyh9f0ad1d_0 venv/requirement.txt
Size: 557 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
NBChub/bgcflow_wrapper
A snakemake wrapper and utility tools command line interface for BGCFlow.- 0.6.2 poetry.lock
Size: 1.77 MB - Last synced: 1 day ago - Pushed: 1 day ago
ksuderman/galaxy Fork of galaxyproject/galaxy
Data intensive science for everyone.- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 605 MB - Last synced: 29 days ago - Pushed: 2 months ago
yvanlebras/galaxy Fork of galaxyproject/galaxy
Data intensive science for everyone.- ==0.6.2 lib/galaxy/dependencies/dev-requirements.txt
- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 602 MB - Last synced: about 1 month ago - Pushed: 3 months ago
pepkit/geofetch
Builds a PEP from SRA or GEO accessions- >=0.6.2 requirements/requirements-all.txt
Size: 913 KB - Last synced: 17 days ago - Pushed: 3 months ago
matinnuhamunada/bgcflow_wrapper
A snakemake wrapper and utility tools for BGCFlow.- 0.6.2 poetry.lock
Size: 604 KB - Last synced: about 1 year ago - Pushed: over 1 year ago
fairtracks/galaxy-interactive-client-tool Fork of galaxyproject/galaxy
Data intensive science for everyone.- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 592 MB - Last synced: 3 months ago - Pushed: 3 months ago
databio/peppro
A modular, containerized pipeline for PRO-seq data processing- >=0.6.1 requirements.txt
Size: 33.9 MB - Last synced: 21 days ago - Pushed: 6 months ago
cat-bro/galaxy Fork of galaxyproject/galaxy
Data intensive science for everyone.- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 591 MB - Last synced: 3 months ago - Pushed: 3 months ago
kxk302/galaxy Fork of galaxyproject/galaxy
Data intensive science for everyone.- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 565 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
gulsumgudukbay/galaxy Fork of galaxyproject/galaxy
Data intensive science for everyone.- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 588 MB - Last synced: about 2 months ago - Pushed: over 1 year ago
HugoJH/galaxy Fork of galaxyproject/galaxy
Data intensive science for everyone.- ==0.6.1 lib/galaxy/dependencies/dev-requirements.txt
- ==0.6.1 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.1 requirements.txt
Size: 515 MB - Last synced: about 1 year ago - Pushed: about 1 year ago
biocompute-objects/galaxy Fork of galaxyproject/galaxy
Data intensive science for everyone.- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 594 MB - Last synced: about 1 month ago - Pushed: 3 months ago
qiagu/galaxy Fork of galaxyproject/galaxy
Data intensive science for everyone.- ==0.6.1 lib/galaxy/dependencies/dev-requirements.txt
- ==0.6.1 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.1 requirements.txt
Size: 565 MB - Last synced: 10 months ago - Pushed: 10 months ago
sveinugu/galaxy Fork of galaxyproject/galaxy
Data intensive science for everyone.- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 599 MB - Last synced: 6 months ago - Pushed: 6 months ago
mahendrapaipuri/galaxy Fork of galaxyproject/galaxy
Data intensive science for everyone.- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 592 MB - Last synced: about 1 month ago - Pushed: 11 months ago
anvilproject/galaxy Fork of galaxyproject/galaxy
Data intensive science for everyone.- ==0.6.2 lib/galaxy/dependencies/dev-requirements.txt
- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 606 MB - Last synced: about 2 months ago - Pushed: about 2 months ago
astrovsky01/galaxy Fork of galaxyproject/galaxy
Data intensive science for everyone.- ==0.6.2 lib/galaxy/dependencies/dev-requirements.txt
- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 609 MB - Last synced: 3 months ago - Pushed: 3 months ago
muon-spectroscopy-computational-project/muon-galaxy Fork of galaxyproject/galaxy
Data intensive science for everyone.- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 614 MB - Last synced: 2 months ago - Pushed: 2 months ago
common-workflow-lab/galaxy Fork of galaxyproject/galaxy
Fork of Galaxy (http://galaxyproject.org/) attempting to implement the CWL spec.- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 612 MB - Last synced: about 1 month ago - Pushed: about 1 month ago
Paprikant/galaxy Fork of usegalaxy-eu/galaxy
Data intensive science for everyone.- ==0.6.2 lib/galaxy/dependencies/dev-requirements.txt
- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
Size: 589 MB - Last synced: about 1 month ago - Pushed: over 1 year ago
nsoranzo/galaxy Fork of galaxyproject/galaxy
Data intensive biology for everyone.- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 606 MB - Last synced: 15 days ago - Pushed: 15 days ago
hujambo-dunia/galaxy Fork of galaxyproject/galaxy
Data intensive science for everyone.- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 610 MB - Last synced: about 11 hours ago - Pushed: 1 day ago
tcollins2011/galaxy Fork of galaxyproject/galaxy
Data intensive science for everyone.- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 606 MB - Last synced: 3 months ago - Pushed: 3 months ago
bernt-matthias/galaxy Fork of galaxyproject/galaxy
Data intensive science for everyone.- ==0.6.2 lib/galaxy/dependencies/pinned-requirements.txt
- ==0.6.2 requirements.txt
Size: 611 MB - Last synced: about 9 hours ago - Pushed: about 11 hours ago
