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GitHub / sbl-sdsc / mmtf-genomics
Methods for mapping genomic data onto 3D protein structure.
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/sbl-sdsc%2Fmmtf-genomics
Stars: 27
Forks: 10
Open Issues: 0
License: apache-2.0
Language: Jupyter Notebook
Repo Size: 6.17 MB
Dependencies:
23
Created: almost 6 years ago
Updated: over 1 year ago
Last pushed: about 2 years ago
Last synced: about 1 year ago
Topics: binder, cyverse, dbsnp, genomics, mmtf-pyspark, mutations, protein-data-bank, protein-drug-interactions, protein-ligand-interactions, protein-protein-interaction, protein-structure, pyspark
Files
Dependencies
- biopython 1.72.*
- conda-pack 0.7.0.*
- ipywidgets 7.6.5.*
- jupyterlab 3.2.5.*
- monotonic
- numba 0.49.0.*
- numpy 1.16.1.*
- openjdk 8.0.152.*
- pip
- py2neo
- pyspark 2.4.0.*
- python 3.7.*