Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub topics: cyverse
hclent/citesCyverse
A special version of the Science Citation Knowledge Extractor (SCKE) for CyVerse
Language: HTML - Size: 65.6 MB - Last synced: 22 days ago - Pushed: over 6 years ago - Stars: 2 - Forks: 4
cyverseuk/Trimmomatic
docker image and Agave app for Trimmomatic software
Size: 3.91 KB - Last synced: 8 months ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0
cyverseuk/uncompress_gunzip
Size: 1.95 KB - Last synced: 10 months ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0
cyverseuk/samtools
Language: Shell - Size: 10.7 KB - Last synced: 10 months ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0
cyverseuk/sickle
Language: Shell - Size: 6.84 KB - Last synced: 10 months ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0
cyverseuk/Tophat2
Language: Shell - Size: 25.4 KB - Last synced: 10 months ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0
cyverseuk/ocsi Fork of cyversewarwick/ocsi
Language: Python - Size: 183 KB - Last synced: 10 months ago - Pushed: about 6 years ago - Stars: 0 - Forks: 0
cyverseuk/ontologizer
Language: Shell - Size: 5.86 KB - Last synced: 10 months ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0
cyverseuk/MUSCLE
Language: Shell - Size: 3.91 KB - Last synced: 10 months ago - Pushed: about 7 years ago - Stars: 0 - Forks: 1
cyverseuk/cut_columns
Language: Shell - Size: 3.91 KB - Last synced: 10 months ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0
cyverseuk/Cufflinks
Language: Shell - Size: 14.6 KB - Last synced: 10 months ago - Pushed: about 5 years ago - Stars: 0 - Forks: 0
cyverseuk/concatenate_files
Language: Shell - Size: 3.91 KB - Last synced: 10 months ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0
cyverseuk/Bowtie2
Language: Shell - Size: 10.7 KB - Last synced: 10 months ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0
cyverseuk/blast
blast docker image and cyverse integration
Language: Shell - Size: 22.5 KB - Last synced: 10 months ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0
Andries-B/Hamster
Cross-platform iRODS GUI client and metadata editor
Language: Python - Size: 166 KB - Last synced: 10 months ago - Pushed: 10 months ago - Stars: 3 - Forks: 5
Computational-Plant-Science/pycyapi
unofficial Python CyVerse API client
Language: Python - Size: 776 KB - Last synced: 13 days ago - Pushed: over 1 year ago - Stars: 4 - Forks: 2
mwvaughn/cyverse-sdk Fork of cyverse/cyverse-sdk 📦
A resource for CyVerse developers
Language: Shell - Size: 50 MB - Last synced: about 1 year ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0
sbl-sdsc/mmtf-genomics
Methods for mapping genomic data onto 3D protein structure.
Language: Jupyter Notebook - Size: 6.17 MB - Last synced: over 1 year ago - Pushed: about 2 years ago - Stars: 27 - Forks: 10
Computational-Plant-Science/plantit-example-accessing-data
A simple workflow mapping an input file to an output file.
Size: 11.7 KB - Last synced: over 1 year ago - Pushed: over 2 years ago - Stars: 1 - Forks: 0
willkuhn/towd
Exploring the evolutionary history of dragonflies and damselflies (Odonata) from their wings!
Size: 5.25 MB - Last synced: about 1 year ago - Pushed: about 3 years ago - Stars: 0 - Forks: 0
cyverse-gis/calliope
Github.io website for Calliope Project
Language: HTML - Size: 71.1 MB - Last synced: about 1 year ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0
warelab/sciapps
SciApps: a cloud-based platform for reproducible bioinformatics workflows
Language: JavaScript - Size: 9.22 MB - Last synced: about 2 months ago - Pushed: over 3 years ago - Stars: 2 - Forks: 1
cyverseuk/btrim
Language: Shell - Size: 6.84 KB - Last synced: 7 months ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0
cyverseuk/Retrieve_BIP_Phenotypes
Docker container for retrieveing Phenotypic data from the Brassica Information Portal. It uses the BIP-API, stores output in .csv-format and passes the Sequence IDs on into a .txt file for further queries.
Language: Ruby - Size: 322 KB - Last synced: 10 months ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0