Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub topics: sequence-alignment
lh3/editdist-U85
Fast implementation of Ukkenon's O(ND) algorithm for computing edit distance
Language: C - Size: 25.4 KB - Last synced: 2 minutes ago - Pushed: about 2 years ago - Stars: 9 - Forks: 1
lh3/minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
Language: C - Size: 1.82 MB - Last synced: 3 minutes ago - Pushed: 7 days ago - Stars: 1,689 - Forks: 387
laurentnoe/iedera
subset and spaced seed design tool
Language: C++ - Size: 1.45 MB - Last synced: 26 days ago - Pushed: 27 days ago - Stars: 2 - Forks: 1
cogent3/cogent3
Comparative Genomics Toolkit 3
Language: Python - Size: 41.5 MB - Last synced: 1 day ago - Pushed: 1 day ago - Stars: 93 - Forks: 52
biopython/biopython
Official git repository for Biopython (originally converted from CVS)
Language: Python - Size: 67.5 MB - Last synced: about 5 hours ago - Pushed: about 23 hours ago - Stars: 4,171 - Forks: 1,713
Nazeeefa/awesome-sequencing-tech-papers
A collection of publications on comparison of high-throughput sequencing technologies.
Size: 163 KB - Last synced: about 5 hours ago - Pushed: 1 day ago - Stars: 26 - Forks: 3
wurmlab/sequenceserver
Intuitive graphical web interface for running BLAST bioinformatics tool (i.e. have your own custom NCBI BLAST site!)
Language: JavaScript - Size: 78.7 MB - Last synced: about 5 hours ago - Pushed: 1 day ago - Stars: 265 - Forks: 113
kensho-technologies/sequence_align
Efficient implementations of Needleman-Wunsch and other sequence alignment algorithms written in Rust with Python bindings via PyO3.
Language: Python - Size: 207 KB - Last synced: about 4 hours ago - Pushed: 1 day ago - Stars: 57 - Forks: 2
lh3/minigraph
Sequence-to-graph mapper and graph generator
Language: C - Size: 916 KB - Last synced: 3 minutes ago - Pushed: 11 days ago - Stars: 388 - Forks: 37
lh3/miniprot
Align proteins to genomes with splicing and frameshift
Language: C - Size: 436 KB - Last synced: 3 minutes ago - Pushed: 20 days ago - Stars: 301 - Forks: 15
baku4/sigalign
A Similarity-Guided Alignment Algorithm
Language: Rust - Size: 18.7 MB - Last synced: 2 days ago - Pushed: 2 days ago - Stars: 10 - Forks: 1
nbay13/toilkit
A python package for working with inputs to and outputs from the toil-rnaseq pipeline
Language: Python - Size: 802 KB - Last synced: 1 day ago - Pushed: 3 days ago - Stars: 1 - Forks: 0
CDCgov/MicrobeTrace Fork of AABoyles/MicrobeTrace
The Visualization Multitool for Molecular Epidemiology and Bioinformatics
Language: TypeScript - Size: 124 MB - Last synced: 3 days ago - Pushed: 3 days ago - Stars: 83 - Forks: 37
cankocagil/BioStatistics
Differential Gene Expression, Phylogenetic tree, Sequence Alignments, Biostatistics, Bioinformatic
Language: R - Size: 3.97 MB - Last synced: 3 days ago - Pushed: almost 3 years ago - Stars: 1 - Forks: 0
Gagniuc/Visual-Sequence-Alignment-in-VB6
This highly visual and responsive VB6 application is an implementation of the global sequence alignment algorithm. It allows the modification of the alignment parameters (match, mismatch, gap), and it shows the pairwise alignment as well as the score matrix in real time.
Language: Visual Basic 6.0 - Size: 7.26 MB - Last synced: about 16 hours ago - Pushed: over 1 year ago - Stars: 8 - Forks: 2
Gagniuc/Simple-sequence-alignment-in-VB6
This highly responsive VB6 application is an implementation of the global sequence alignment algorithm. It allows the modification of the alignment parameters (match, mismatch, gap), and it shows the pairwise alignment as well as the score matrix in real time. The purpose of it is to seeks the optimal alignment between two text sequences.
Language: Visual Basic 6.0 - Size: 4.31 MB - Last synced: about 16 hours ago - Pushed: over 1 year ago - Stars: 6 - Forks: 2
biojava/biojava
:book::microscope::coffee: BioJava is an open-source project dedicated to providing a Java library for processing biological data.
Language: Java - Size: 48.1 MB - Last synced: 6 days ago - Pushed: 6 days ago - Stars: 574 - Forks: 376
seqan/seqan3
The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.
Language: C++ - Size: 20.6 MB - Last synced: 4 days ago - Pushed: about 2 months ago - Stars: 389 - Forks: 80
mdsiaofficial/Directed-Acyclic-Graph-with-Sequence-Pattern-Graph
Directed-Acyclic-Graph-with-Sequence-Pattern-Graph
Language: C++ - Size: 95.7 KB - Last synced: 8 days ago - Pushed: 8 days ago - Stars: 0 - Forks: 0
TimoLassmann/kalign
A fast multiple sequence alignment program.
Language: C - Size: 1.68 MB - Last synced: 8 days ago - Pushed: 8 days ago - Stars: 115 - Forks: 28
nsbuitrago/parasail-rs
SIMD pairwise sequence alignment
Language: Rust - Size: 105 KB - Last synced: 8 days ago - Pushed: 10 days ago - Stars: 1 - Forks: 0
github4touchdouble/bench-sequence-alignments
Benchmark the performance of sequence alignment workflows
Language: Ruby - Size: 16.6 KB - Last synced: 10 days ago - Pushed: 10 days ago - Stars: 0 - Forks: 0
BCCDC-PHL/consensus-align-utr-trim
Align SARS-CoV-2 sequences against a reference genome, and trim UTR sequences
Language: Nextflow - Size: 19.5 KB - Last synced: 13 days ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 0
moshi4/pyMSAviz
MSA(Multiple Sequence Alignment) visualization python package for sequence analysis
Language: Python - Size: 7.07 MB - Last synced: 8 days ago - Pushed: 7 months ago - Stars: 65 - Forks: 9
torognes/vsearch
Versatile open-source tool for microbiome analysis
Language: C++ - Size: 5.23 MB - Last synced: 18 days ago - Pushed: 19 days ago - Stars: 625 - Forks: 122
microsoft/bistring
Bidirectionally transformed strings
Language: Python - Size: 978 KB - Last synced: about 11 hours ago - Pushed: 4 months ago - Stars: 367 - Forks: 19
lh3/bwa
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
Language: C - Size: 1.65 MB - Last synced: 28 days ago - Pushed: about 2 months ago - Stars: 1,431 - Forks: 538
flatironinstitute/deepblast
Neural Networks for Protein Sequence Alignment
Language: Python - Size: 56.7 MB - Last synced: 10 days ago - Pushed: 23 days ago - Stars: 96 - Forks: 16
sanderlab/alignmentviewer
Multiple sequence alignment visualizer
Language: JavaScript - Size: 9.26 MB - Last synced: about 7 hours ago - Pushed: over 1 year ago - Stars: 25 - Forks: 6
Martinsos/edlib
Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.
Language: C++ - Size: 4.62 MB - Last synced: 18 days ago - Pushed: about 1 year ago - Stars: 484 - Forks: 159
laurentnoe/yass
genomic alignment similarity search tool
Language: C - Size: 496 KB - Last synced: 24 days ago - Pushed: 24 days ago - Stars: 17 - Forks: 6
assadiab/Smith_waterman
🧬 Implementation of the Smith-Waterman algorithm for aligning amino acid sequences.
Language: C - Size: 237 KB - Last synced: 28 days ago - Pushed: 29 days ago - Stars: 0 - Forks: 0
d8vela/ColabSeq
ColabSeq: The one-stop shop for all of your multiple sequence analysis needs.
Language: Jupyter Notebook - Size: 402 KB - Last synced: 30 days ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0
lh3/unimap
A EXPERIMENTAL fork of minimap2 optimized for assembly-to-reference alignment
Language: C - Size: 487 KB - Last synced: 3 minutes ago - Pushed: about 3 years ago - Stars: 84 - Forks: 4
althonos/pyfamsa
Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments.
Language: Python - Size: 188 KB - Last synced: 1 day ago - Pushed: 3 months ago - Stars: 21 - Forks: 2
AABoyles/MicrobeTrace
The Visualization Multitool for Molecular Epidemiology and Bioinformatics
Language: HTML - Size: 68.5 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 9 - Forks: 38
lh3/miniwfa
A reimplementation of the WaveFront Alignment algorithm at low memory
Language: C - Size: 196 KB - Last synced: 3 minutes ago - Pushed: almost 2 years ago - Stars: 48 - Forks: 3
BioJulia/BioAlignments.jl
Sequence alignment tools
Language: Julia - Size: 1.11 MB - Last synced: 18 days ago - Pushed: over 1 year ago - Stars: 58 - Forks: 24
jguhlin/minimap2-rs
Rust bindings to minimap2 library
Language: Rust - Size: 21.4 MB - Last synced: 1 day ago - Pushed: about 2 months ago - Stars: 51 - Forks: 10
chrisarg/alien-seqalignment-edlib
Sequence Alignment tool
Language: Perl - Size: 52.7 KB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0
chrisarg/alien-seqalignment-parasail
Sequence Alignment tool
Language: Perl - Size: 31.3 KB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0
chrisarg/alien-seqalignment-last
Sequence Alignment tool
Language: Perl - Size: 37.1 KB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0
chrisarg/alien-seqalignment-hmmer3
Sequence Alignment tool
Language: Perl - Size: 40 KB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0
chrisarg/alien-seqalignment-mmseqs2
Sequence Alignment tool
Language: Perl - Size: 29.3 KB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0
chrisarg/alien-seqalignment-bowtie2
Sequence Alignment tool
Language: Perl - Size: 32.2 KB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0
qPCR4vir/seqan3 Fork of seqan/seqan3
The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.
Language: C++ - Size: 13 MB - Last synced: about 1 month ago - Pushed: about 3 years ago - Stars: 0 - Forks: 0
nsbuitrago/libparasail-sys
Rust bindings for the Parasail C library
Language: Rust - Size: 34.2 KB - Last synced: 8 days ago - Pushed: 15 days ago - Stars: 0 - Forks: 0
drostlab/rdiamond
Running DIAMOND2 through R
Language: R - Size: 628 KB - Last synced: about 1 month ago - Pushed: 7 months ago - Stars: 5 - Forks: 2
lh3/ksw2
Global alignment and alignment extension
Language: C - Size: 189 KB - Last synced: 3 minutes ago - Pushed: 10 months ago - Stars: 123 - Forks: 24
benhid/pyMSA
Scoring multiple sequence alignments with Python
Language: Python - Size: 1.34 MB - Last synced: 19 days ago - Pushed: 11 months ago - Stars: 20 - Forks: 10
CaoTianze/plotnineseqsuite
plotnineSeqSuite: a Python package for visualizing sequence data using ggplot2 style
Language: Python - Size: 11 MB - Last synced: 24 days ago - Pushed: about 2 months ago - Stars: 5 - Forks: 0
mrdanieleze/Genomic-Sequence-Comparison-Code-GSCC-
This repository houses the Genomic Sequence Comparison Code (GSCC), a collection of Python scripts designed for genomic sequence analysis. Whether you're comparing suspected sequences with known reference sequences or delving into bioinformatics, GSCC provides versatile tools for pairwise alignment. Feel free to explore!
Language: Python - Size: 26.4 KB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 2 - Forks: 0
hdescobarh/pairwasm_alignment
This is an experiment implementing a WebAssembly pairwise sequence alignment module in Rust 🦀.
Language: Rust - Size: 1.41 MB - Last synced: 2 days ago - Pushed: 3 months ago - Stars: 1 - Forks: 0
althonos/pyopal
Cython bindings and Python interface to Opal, a SIMD-accelerated database search aligner.
Language: Python - Size: 207 KB - Last synced: 3 days ago - Pushed: 2 months ago - Stars: 7 - Forks: 1
biocommons/uta
Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; available as a docker image
Language: Python - Size: 10.4 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 60 - Forks: 26
biocommons/uta-align
C-based Needleman-Wunsch and Smith-Waterman alignment algorithms with a Python interface.
Language: Cython - Size: 350 KB - Last synced: 12 days ago - Pushed: about 1 month ago - Stars: 5 - Forks: 6
drostlab/orthologr
Genome wide orthology inference and dNdS estimation
Language: R - Size: 103 MB - Last synced: about 1 month ago - Pushed: 7 months ago - Stars: 82 - Forks: 27
thekaplanlab/msabrowser
🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations
Language: JavaScript - Size: 412 KB - Last synced: about 2 months ago - Pushed: over 1 year ago - Stars: 29 - Forks: 6
niaid/Genome-Browsers
This repo contains materials for the Genome Browsers course, taught as part of ACE 2021.
Size: 5.03 MB - Last synced: about 2 months ago - Pushed: about 3 years ago - Stars: 0 - Forks: 1
estebanpw/chromeister
A dotplot generator for large chromosomes
Language: C - Size: 927 KB - Last synced: about 2 months ago - Pushed: 7 months ago - Stars: 38 - Forks: 4
CMU-SAFARI/Genome-on-Diet
Genome-on-Diet is a fast and memory-frugal framework for exemplifying sparsified genomics for read mapping, containment search, and metagenomic profiling. It is much faster & more memory-efficient than minimap2 for Illumina, HiFi, and ONT reads. Described by Alser et al. (preliminary version: https://arxiv.org/abs/2211.08157).
Language: Roff - Size: 63 MB - Last synced: 5 days ago - Pushed: 7 months ago - Stars: 11 - Forks: 4
hallamlab/samsum
A light-weight python package for summarizing sequence coverage from SAM and BAM files
Language: Python - Size: 1.92 MB - Last synced: 3 days ago - Pushed: over 2 years ago - Stars: 4 - Forks: 3
TianyiShi2001/sequence-alignment-js
Sequence Alignment Algorithms implemented in Javascript, with a command line application
Language: JavaScript - Size: 61.5 KB - Last synced: 2 days ago - Pushed: over 3 years ago - Stars: 3 - Forks: 0
Robaina/filterSAM
Tools to filter SAM/BAM files by percent identity and percent of matched sequence
Language: Python - Size: 313 KB - Last synced: 7 days ago - Pushed: 11 months ago - Stars: 3 - Forks: 0
D-DiSarno/Sense_Puzzle
Siamese neural network for sequence embedding and genetic algorithm
Language: C++ - Size: 48.6 MB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 0 - Forks: 0
YSChen0609/Sequence-Align
A sequence alignment module implementing Needleman-Wunsch algorithm.
Language: Python - Size: 7.81 KB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 0 - Forks: 0
Jong-hun-Park/trviz
A python library for decomposing and visualizing tandem repeat sequences
Language: Python - Size: 2.64 MB - Last synced: 8 days ago - Pushed: 2 months ago - Stars: 6 - Forks: 0
lh3/bioseq-js
For live demo, see http://lh3lh3.users.sourceforge.net/bioseq.shtml
Language: HTML - Size: 16.6 KB - Last synced: 3 minutes ago - Pushed: over 4 years ago - Stars: 37 - Forks: 12
bbuchfink/diamond
Accelerated BLAST compatible local sequence aligner.
Language: C++ - Size: 31.4 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 912 - Forks: 162
AuricFox/genomics
Repo dedicated to bioinformatics where genomic files are processed for sequence analysis, alignment, and more.
Language: Python - Size: 87.4 MB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 1 - Forks: 0
monagrland/pytransaln
Translation-guided nucleotide alignment for coding sequences
Language: Python - Size: 95.7 KB - Last synced: 17 days ago - Pushed: 3 months ago - Stars: 0 - Forks: 0
safaad/aim
AIM, A Framework for High-throughput Sequence Alignment using Real Processing-in-Memory Systems, Bioinformatics, btad155, https://doi.org/10.1093/bioinformatics/btad155
Language: C - Size: 1.18 MB - Last synced: about 1 month ago - Pushed: about 1 year ago - Stars: 19 - Forks: 2
DulanDias/DNA-Sequence-Alignment
DNA Sequence Alignment with Dynamic Programming Implementation using the Needleman-Wunsch Algorithm and Smith-Waterman Algorithm.
Language: Java - Size: 30.3 KB - Last synced: 3 months ago - Pushed: about 4 years ago - Stars: 5 - Forks: 1
IbrahimTanyalcin/lexicon-mono-seq
DOM Text Based Multiple Sequence Alignment Library
Language: JavaScript - Size: 117 MB - Last synced: 7 days ago - Pushed: almost 5 years ago - Stars: 19 - Forks: 5
marco-ruiz/pairwise-sequence-aligner
Applications that compute pairwise alignments of two biological sequences
Language: Java - Size: 1.04 MB - Last synced: 3 months ago - Pushed: over 2 years ago - Stars: 1 - Forks: 0
NAL-i5K/genomics-workspace
Django website project for common sequence search tools.
Language: JavaScript - Size: 444 MB - Last synced: 17 days ago - Pushed: over 1 year ago - Stars: 14 - Forks: 5
rdpstaff/RDPTools
Collection of commonly used RDP Tools for easy building
Language: Makefile - Size: 37.1 KB - Last synced: about 1 month ago - Pushed: 11 months ago - Stars: 49 - Forks: 58
brentp/spacepile
convert reads from repeated measures of same piece of DNA into spaced matricies for deep learners.
Language: Rust - Size: 31.3 KB - Last synced: about 13 hours ago - Pushed: about 1 year ago - Stars: 13 - Forks: 0
anthonyvittoria/smith-waterman-js
JavaScript implementation of the Smith-Waterman algorithm for local sequence alignment
Language: JavaScript - Size: 1.95 KB - Last synced: 3 months ago - Pushed: almost 4 years ago - Stars: 0 - Forks: 0
algbio/emerald
EMERALD calculates safety-windows by exploring the suboptimal alignment space
Language: C++ - Size: 1.43 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 15 - Forks: 0
Gagniuc/Jupiter-Bioinformatics-V1
Jupiter Bioinformatics (V1) - To find similarities between two words, a manual comparison is required. For words between 4 and 8 letters, such a task can be performed by any of us without the use of a computer. However, what if the objects of comparison are entire phrases/sequences/files?
Language: HTML - Size: 15.8 MB - Last synced: about 16 hours ago - Pushed: about 2 years ago - Stars: 4 - Forks: 1
LKremer/MSA_trimmer
Straightforward & minimalistic removal of poorly aligned regions in sequence alignments.
Language: Python - Size: 8.79 KB - Last synced: about 1 month ago - Pushed: about 5 years ago - Stars: 13 - Forks: 1
Noorts/DLSA 📦
🧬 Distributing Local Sequence Alignment using Volunteer Computing
Language: Python - Size: 32.4 MB - Last synced: 3 months ago - Pushed: 4 months ago - Stars: 1 - Forks: 0
RBVI/minrms
A bioinformatics algorithm for generating sequence alignments from 3D structures
Language: C++ - Size: 534 KB - Last synced: about 1 month ago - Pushed: about 2 years ago - Stars: 3 - Forks: 1
4nuG/Genetics-project
Achieve precise and swift alignment of Fragaria iinumae genomes using BWA-MEM
Size: 3.35 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 0 - Forks: 0
chchch/sanskrit-alignment
Sequence alignment and textual reconstruction for Sanskrit texts
Language: JavaScript - Size: 44.8 MB - Last synced: 3 months ago - Pushed: 4 months ago - Stars: 9 - Forks: 3
s-andrews/redotable
A dotplot application for DNA/RNA sequence
Language: Java - Size: 388 KB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 10 - Forks: 1
SanojPunchihewa/f5n
Genopo a.k.a. F5N - A nanopore sequencing analysis toolkit for Android smartphones https://nanoporetech.com
Language: Java - Size: 123 MB - Last synced: 18 days ago - Pushed: over 2 years ago - Stars: 10 - Forks: 7
quim0/WFA-GPU
GPU implementation of the Wavefront Alignment Algorithm for global, gap-affine, pairwise sequence alginment
Language: C - Size: 4.98 MB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 24 - Forks: 3
TravisWheelerLab/WASITAMATchISAW
Approximate palindromes lead to overstated false match rates in benchmarks using reversed sequences
Language: Jupyter Notebook - Size: 21.8 MB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 0 - Forks: 0
CMU-SAFARI/GateSeeder
GateSeeder is the first near-memory CPU-FPGA co-design for alleviating both the compute-bound and memory-bound bottlenecks in short and long-read mapping. GateSeeder outperforms Minimap2 by up to 40.3×, 4.8×, and 2.3× when mapping real ONT, HiFi, and Illumina reads, respectively.
Language: C - Size: 1.24 MB - Last synced: 5 days ago - Pushed: 7 months ago - Stars: 5 - Forks: 0
unikill066/BLAST-Search
Search and Alignment Tool in Bioinformatics Domain
Language: Shell - Size: 600 KB - Last synced: 4 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0
ppillot/biomsalign
JavaScript library for Multiple Sequence Alignment
Language: TypeScript - Size: 622 KB - Last synced: 24 days ago - Pushed: 4 months ago - Stars: 15 - Forks: 0
Sagarnandeshwar/Sequence_Alignment_For_Probabilistic_Genome
Computational Biology Methods and Research (COMP 561) Course Project
Language: Python - Size: 2.73 MB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 1 - Forks: 0
lorenzocestaro/seqalign
Collection of sequence alignment algorithms.
Language: JavaScript - Size: 366 KB - Last synced: 29 days ago - Pushed: about 1 year ago - Stars: 25 - Forks: 1
datasnakes/OrthoEvolution
An easy to use and comprehensive python package which aids in the analysis and visualization of orthologous genes. 🐵
Language: Python - Size: 40.6 MB - Last synced: 3 days ago - Pushed: 4 months ago - Stars: 27 - Forks: 4
jeremyButtler/alnSeq
AlnSeq runs a c coded Smith Waterman, Needleman Wunsch, and an Hirschberg. It can run as a standalone or as a library for python.
Language: C - Size: 10.8 MB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 0 - Forks: 0
gio-del/AAPP-Challenges 📦
Challenges of the Advanced Algorithms and Parallel Computing course
Language: C++ - Size: 5.93 MB - Last synced: 9 days ago - Pushed: 4 months ago - Stars: 0 - Forks: 0
iosonofabio/seqanpy
Fast pairwise sequence alignment using SeqAn, in Python.
Language: C++ - Size: 32.2 KB - Last synced: 2 days ago - Pushed: about 5 years ago - Stars: 13 - Forks: 7
gaojunxuan/chrom_mini_graph
Space-efficient minimizer-based pangenome reference graph and haplotype mapping tool
Language: Rust - Size: 32.5 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 7 - Forks: 0
