Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

GitHub topics: genomics-visualization

moshi4/pyCirclize

Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)

Language: Python - Size: 50.5 MB - Last synced: about 5 hours ago - Pushed: about 5 hours ago - Stars: 629 - Forks: 36

epiviz/epiviz.gl

Visualize genomic data using webgl and webworkers, in an effort to provide a fluid, high-performance user experience.

Language: JavaScript - Size: 68 MB - Last synced: about 9 hours ago - Pushed: about 10 hours ago - Stars: 9 - Forks: 5

neuhausi/canvasxpress-js

CanvasXpress: A JavaScript Library for Data Analytics with Full Audit Trail Capabilities.

Language: CSS - Size: 25.7 MB - Last synced: about 11 hours ago - Pushed: 1 day ago - Stars: 8 - Forks: 1

gosling-lang/gosling-website

Documentation website of Gosling.js

Language: MDX - Size: 36.1 MB - Last synced: about 8 hours ago - Pushed: about 12 hours ago - Stars: 3 - Forks: 3

xinglab-ai/genomap

Cartography of Genomic Interactions Enables Deep Analysis of Single-Cell Expression Data (Nature Communications, 2023)

Language: Python - Size: 43.7 MB - Last synced: about 11 hours ago - Pushed: 9 months ago - Stars: 11 - Forks: 2

bigomics/omicsplayground

Visual self-service analytics platform for big omics data.

Language: R - Size: 1.15 GB - Last synced: about 20 hours ago - Pushed: 1 day ago - Stars: 115 - Forks: 34

Appsilon/shiny.gosling

R Shiny wrapper for Gosling.js - Grammar-based Toolkit for Scalable and Interactive Genomics Data Visualization

Language: R - Size: 13.7 MB - Last synced: 1 day ago - Pushed: 2 days ago - Stars: 16 - Forks: 1

cidm-ph/phylepic

Epidemic curve + phylogenomic tree

Language: R - Size: 7.73 MB - Last synced: 1 day ago - Pushed: 3 days ago - Stars: 0 - Forks: 0

moshi4/pyGenomeViz

A genome visualization python package for comparative genomics

Language: Python - Size: 47.8 MB - Last synced: 2 days ago - Pushed: 7 months ago - Stars: 231 - Forks: 19

wurmlab/sequenceserver

Intuitive graphical web interface for running BLAST bioinformatics tool (i.e. have your own custom NCBI BLAST site!)

Language: JavaScript - Size: 80.3 MB - Last synced: 3 days ago - Pushed: 4 days ago - Stars: 266 - Forks: 114

robotoD/GenoVi

GenoVi, an automated customizable circular genome visualizer for bacteria and archaea

Language: Python - Size: 175 MB - Last synced: 2 days ago - Pushed: 11 months ago - Stars: 64 - Forks: 10

nf-core/hgtseq

A pipeline to investigate horizontal gene transfer from NGS data

Language: Nextflow - Size: 5.11 MB - Last synced: 9 days ago - Pushed: 9 days ago - Stars: 18 - Forks: 4

arvkevi/ezancestry

Easy genetic ancestry predictions in Python

Language: Jupyter Notebook - Size: 25 MB - Last synced: 11 days ago - Pushed: 11 days ago - Stars: 56 - Forks: 11

bernatgel/karyoploteR

karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome

Language: R - Size: 3.06 MB - Last synced: 9 days ago - Pushed: 4 months ago - Stars: 287 - Forks: 40

AminMahpour/Wigman

Generate heatmap plots from genomic BigWig data

Language: Python - Size: 678 KB - Last synced: 15 days ago - Pushed: 15 days ago - Stars: 2 - Forks: 0

gauravcodepro/slurm-pbs

slurm and pbs scripts for illumina and long read genome assembly, transcriptome, metagenomics and comparative analysis

Language: Shell - Size: 76.2 KB - Last synced: 11 days ago - Pushed: 16 days ago - Stars: 1 - Forks: 0

sscansan/genomics_and_GWAS_tutorials

Analysis of SNP variants, derived from chip array genotyping and HTS sequencing

Language: HTML - Size: 26.6 MB - Last synced: 16 days ago - Pushed: 16 days ago - Stars: 1 - Forks: 0

YogiOnBioinformatics/Maternal-to-Zygotic-Transition-in-Xenopus-laevis

Research project undertaken in Computational Genomics at the University of Pittsburgh. with Dr. Miler Lee and students to understand Maternal-to-Zygotic transition in Xenopus laevis

Language: Shell - Size: 1.9 MB - Last synced: 16 days ago - Pushed: over 1 year ago - Stars: 1 - Forks: 0

thierrygosselin/radiator

RADseq Data Exploration, Manipulation and Visualization using R

Language: HTML - Size: 9.68 MB - Last synced: 3 days ago - Pushed: 17 days ago - Stars: 57 - Forks: 22

brwnj/covviz

Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata

Language: HTML - Size: 126 MB - Last synced: about 24 hours ago - Pushed: about 2 years ago - Stars: 56 - Forks: 7

cluhaowie/VizCNV

VizCNV is an interactive tool designed to analyze and visualize CNVs from short read WGS data in rare disease research. Built on R Studio Shiny, it streamlines the identification of complex genomic rearrangements and facilitates advancements in understanding and diagnosing rare genetic conditions.

Language: R - Size: 125 MB - Last synced: 24 days ago - Pushed: 25 days ago - Stars: 1 - Forks: 2

stevekm/IGV-snapshot-automator

Script to automatically create and run IGV snapshot batchscripts

Language: Python - Size: 26.4 MB - Last synced: 6 days ago - Pushed: over 1 year ago - Stars: 134 - Forks: 49

daler/trackhub

create, manage, and upload track hubs for use in the UCSC genome browser

Language: Python - Size: 13.3 MB - Last synced: 4 days ago - Pushed: 28 days ago - Stars: 51 - Forks: 20

tobiasrausch/vc

A tutorial on structural variant calling for short read sequencing data

Language: R - Size: 96.7 KB - Last synced: 28 days ago - Pushed: 29 days ago - Stars: 14 - Forks: 1

ikergarcia1996/Gene2Tab

This script is used to convert the output of ABRICATE tabulated output into a matrix samples with the genes as columns and the presence/absence of the gene as the values.

Language: Python - Size: 28.3 KB - Last synced: 29 days ago - Pushed: 6 months ago - Stars: 0 - Forks: 0

brentp/jigv

igv.js standalone page generator and automatic configuration to view bam/cram/vcf/bed. "working in under 1 minute"

Language: Nim - Size: 237 MB - Last synced: 16 days ago - Pushed: 11 months ago - Stars: 121 - Forks: 7

sauloal/introgressionbrowser2

Introgression Browser v2.0 - Complete rewrite from the group up of Introgression Browser

Language: JavaScript - Size: 779 KB - Last synced: about 1 month ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0

ucscGenomeBrowser/kent

UCSC Genome Browser source tree. Stable branch: "beta".

Language: C - Size: 548 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 204 - Forks: 84

outbreak-info/python-outbreak-info

Python package to access the genomics and epidemiology data and Research Library metadata compiled and standardized on outbreak.info

Language: Jupyter Notebook - Size: 25.3 MB - Last synced: 2 days ago - Pushed: 3 days ago - Stars: 6 - Forks: 1

jslfree080/bamscope

A command line tool (in Kotlin/JVM) for intuitively visualizing BAM alignments. (Currently unmaintained)

Language: Java - Size: 207 MB - Last synced: about 1 month ago - Pushed: 4 months ago - Stars: 9 - Forks: 0

hw538/cfDNAPro

cfDNAPro specializes in standardized and robust cfDNA fragmentomic analysis

Language: R - Size: 2.67 MB - Last synced: 30 days ago - Pushed: 30 days ago - Stars: 22 - Forks: 2

ovsama/Genomic_Data_Science

Here is a whole bunch of genomic data analyses using Bioconductor packages. The files are found in the form of .R files.

Language: R - Size: 178 KB - Last synced: about 2 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

Zhong-Lab-UCSD/Genomic-Interactive-Visualization-Engine

Genomic Interactive Visualization Engine

Language: JavaScript - Size: 72 MB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 140 - Forks: 32

LyonsLab/coge

CoGe (Comparative Genomics) Platform

Language: Perl - Size: 162 MB - Last synced: about 2 months ago - Pushed: over 2 years ago - Stars: 44 - Forks: 17

cmdoret/tinycov

Command line tool to plot genomic coverage from a BAM file

Language: Python - Size: 34.8 MB - Last synced: about 1 month ago - Pushed: about 1 year ago - Stars: 13 - Forks: 4

w-gao/pgv

A web-based, interactive pangenome visualization tool

Language: TypeScript - Size: 1.15 MB - Last synced: about 2 months ago - Pushed: about 1 year ago - Stars: 16 - Forks: 0

thackl/gggenomes

A grammar of graphics for comparative genomics

Language: R - Size: 94.7 MB - Last synced: about 2 months ago - Pushed: 2 months ago - Stars: 536 - Forks: 64

moshi4/MGCplotter 📦

Microbial Genome Circular plotting tool for comparative genomics using Circos

Language: Python - Size: 68.1 MB - Last synced: 14 days ago - Pushed: over 1 year ago - Stars: 33 - Forks: 6

MaryAgopian/Variant_Barcoding_M.orygis

Variant barcoding pipeline using single nucleotide polymorphisms (SNPs) for the generation of M. orygis standardised markers for diagnostic and epidemiological use.

Language: R - Size: 55.7 KB - Last synced: 2 months ago - Pushed: about 2 years ago - Stars: 0 - Forks: 0

nlawlor/Multiomic_Browser

An R shiny application for visualization of EndoC-bH1 and human islet genomic data

Language: R - Size: 18 MB - Last synced: 2 months ago - Pushed: over 5 years ago - Stars: 1 - Forks: 1

RCollins13/HumanIdiogramLibrary

Resource of human chromosome schematics & images

Size: 18.3 MB - Last synced: about 2 months ago - Pushed: over 3 years ago - Stars: 84 - Forks: 11

IPK-BIT/divbrowse

A web application for interactive visualization and exploratory data analysis of variant call matrices

Language: Svelte - Size: 2.6 MB - Last synced: 29 days ago - Pushed: 10 months ago - Stars: 15 - Forks: 1

CDCgov/MicrobeTrace Fork of AABoyles/MicrobeTrace

The Visualization Multitool for Molecular Epidemiology and Bioinformatics

Language: TypeScript - Size: 124 MB - Last synced: 15 days ago - Pushed: 19 days ago - Stars: 83 - Forks: 37

c3g/epivar-browser

Source code for the EpiVar browser, a web application to search for eQTL/epigenetic signal-associated variants and merge bigWig tracks by genotype.

Language: JavaScript - Size: 39.5 MB - Last synced: 15 days ago - Pushed: 3 months ago - Stars: 2 - Forks: 0

biojs/biojs-frontend 📦

Frontend repository for BioJS.

Language: Vue - Size: 3.35 MB - Last synced: about 2 months ago - Pushed: about 2 years ago - Stars: 15 - Forks: 12

kpatel427/R-scripts

Miscellaneous R script to wrangle data and generate visualizations

Language: R - Size: 143 KB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 9 - Forks: 9

ccneko/OMACASE

an open-source (GPLv3) standalone Python package to analyze optical mapping data, with de novo repeat motif detection and analysis capabilities

Language: Python - Size: 2.74 MB - Last synced: 5 days ago - Pushed: almost 2 years ago - Stars: 1 - Forks: 0

satoshikawato/gbdraw

A genome diagram generator for microbes

Language: Python - Size: 50.7 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 0 - Forks: 0

fllstx/kaplan-meier-estimator

Kaplan-Meier-Estimator also known as the product limit estimator.

Language: TypeScript - Size: 707 KB - Last synced: 16 days ago - Pushed: 4 months ago - Stars: 4 - Forks: 1

NAL-i5K/genomics-workspace

Django website project for common sequence search tools.

Language: JavaScript - Size: 444 MB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 14 - Forks: 5

AABoyles/MicrobeTrace

The Visualization Multitool for Molecular Epidemiology and Bioinformatics

Language: HTML - Size: 68.5 MB - Last synced: 15 days ago - Pushed: about 2 months ago - Stars: 9 - Forks: 38

AKU-CITRIC-Center-for-Bioinformatics/ncov

Genomic Epidemiology of SARS-CoV-2 in Pakistan

Size: 57.2 MB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 3 - Forks: 0

GMOD/jbrowse-jupyter

A python package for showing JBrowse views

Language: Python - Size: 6.45 MB - Last synced: about 1 month ago - Pushed: 5 months ago - Stars: 22 - Forks: 4

G3viz/g3viz

Lollipop-diagram to interactively visualize genetic mutations

Language: JavaScript - Size: 60 MB - Last synced: 4 days ago - Pushed: over 1 year ago - Stars: 30 - Forks: 18

kdyrhage/GenomicMaps.jl

Julia package for visualising genomic data

Language: Julia - Size: 2.5 MB - Last synced: 19 days ago - Pushed: 4 months ago - Stars: 14 - Forks: 2

euxhenh/cellar

Interactive software tool for the assignment of cell types in single-cell studies.

Language: Python - Size: 51.9 MB - Last synced: 3 months ago - Pushed: about 1 year ago - Stars: 30 - Forks: 7

moshi4/GBKviz 📦

Easy-to-use web application for visualization and comparison of genomes in Genbank file

Language: Python - Size: 5.25 MB - Last synced: 8 days ago - Pushed: almost 2 years ago - Stars: 19 - Forks: 4

brentp/seqcover

seqcover allows users to view coverage for hundreds of genes and dozens of samples

Language: Nim - Size: 9.45 MB - Last synced: 17 days ago - Pushed: about 3 years ago - Stars: 49 - Forks: 4

eblancoga/seqcode

Suite of command-line software for high-performance graphical analysis of ChIP-seq/RNA-seq/ATAC-seq data

Language: C - Size: 4.26 MB - Last synced: 5 months ago - Pushed: about 2 years ago - Stars: 12 - Forks: 2

mindleaving/genome-tools

Tools for exploration and analysis of biochemical data like genomics and proteins

Language: C# - Size: 905 KB - Last synced: 5 months ago - Pushed: 11 months ago - Stars: 4 - Forks: 2

gluesolutions/glue-genes

glue for genomics and transcriptomics

Language: Python - Size: 13.3 MB - Last synced: 21 days ago - Pushed: 6 months ago - Stars: 7 - Forks: 2

LankyCyril/edgecase

A framework for extracting telomeric reads from single-molecule sequencing experiments, describing their sequence variation and motifs, and for haplotype inference.

Language: Python - Size: 167 MB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 14 - Forks: 2

hoffmangroup/segway

Application for semi-automated genomic annotation.

Language: Shell - Size: 31 MB - Last synced: 7 months ago - Pushed: 7 months ago - Stars: 11 - Forks: 7

colindaven/jbrowse2_utils

Bash scripts for writing assemblies and tracks to JBrowse2 https://jbrowse.org/jb2/

Language: Shell - Size: 18.6 KB - Last synced: 5 months ago - Pushed: 5 months ago - Stars: 3 - Forks: 0

The1stMartian/GCskewAnalyzer

Analyzes the GC skew of bacterial chromosomes using multiple calculations. Outputs a data frame of GC skew values and wiggle files for visualization.

Language: Python - Size: 2.39 MB - Last synced: 7 months ago - Pushed: about 2 years ago - Stars: 1 - Forks: 0

amcrisan/GEVitRec

Visualization recommender and UI for complex non-tabular data and linked static charts

Language: HTML - Size: 5.5 MB - Last synced: 7 months ago - Pushed: almost 3 years ago - Stars: 2 - Forks: 2

ManinderpreetPuri/Artificial-Intelligence-In-Bioinfromatics-Project1

Computer Science and Information Technology Professionals are being employed in many diverse areas of Science. In this project are focusing on Bioinformatics and the knowledge and skills to understand and participate in this field of research or as an advance step to greater employment opportunities. This project will clarify the fundamentals of Bioinformatics from the end user perspective and will allow us to participate in information gathering.

Size: 1.78 MB - Last synced: 7 months ago - Pushed: about 2 years ago - Stars: 0 - Forks: 1

ManinderpreetPuri/Artificial-Intelligence-In-Bioinformatics-P3

Size: 11.1 MB - Last synced: 7 months ago - Pushed: about 2 years ago - Stars: 0 - Forks: 0

stefanusbernard/Biopython-Genomics-Analysis

Repository codes for genomics analysis using biopython module. Originally created by S. Bernard & M. Aldino for the final project of Genomics course.

Language: Python - Size: 741 KB - Last synced: 7 months ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

mb1511/GenomeWeb

Python package to create line drawings of genomic comparison 'webs'/'hive plots'

Language: Python - Size: 6.19 MB - Last synced: 7 months ago - Pushed: over 5 years ago - Stars: 2 - Forks: 0

alexjschiffer/AutoEmma

Automated Efficient Mixed Model Association Studies - R Package

Language: R - Size: 15.1 MB - Last synced: 7 months ago - Pushed: over 5 years ago - Stars: 3 - Forks: 0

nriddiford/svBreaks

Analysis and plotting functions for structural variant breakpoint data

Language: R - Size: 7.84 MB - Last synced: 7 months ago - Pushed: over 2 years ago - Stars: 3 - Forks: 1

snesic/manhattan-plot-eQTLs-per-gene

Language: R - Size: 4.58 MB - Last synced: 7 months ago - Pushed: over 5 years ago - Stars: 1 - Forks: 2

chasesmith15/Potamilus_EE

Data for Smith et al. 2021 in Ecology and Evolution

Language: R - Size: 7.69 MB - Last synced: 8 months ago - Pushed: about 3 years ago - Stars: 0 - Forks: 0

thierrygosselin/stackr

stackr: an R package to run stacks software pipeline

Language: R - Size: 17.7 MB - Last synced: 12 days ago - Pushed: over 3 years ago - Stars: 26 - Forks: 8

bernatgel/karyoploter_tutorial

Examples on how to use the karyoploteR R/Bioconductor package

Size: 20.4 MB - Last synced: 2 months ago - Pushed: over 1 year ago - Stars: 10 - Forks: 4

gtrichard/deepStats

deepStats: a stastitical toolbox for deeptools and genomic signals

Language: R - Size: 8.53 MB - Last synced: 7 months ago - Pushed: almost 3 years ago - Stars: 30 - Forks: 3

Sarah-Hesham-2022/De-Bruijn-Graph-for-Genome-Assembly

Data Analysis for Genomics, De Bruijn Graph for Genome Assembly.

Language: Python - Size: 230 KB - Last synced: 4 months ago - Pushed: 9 months ago - Stars: 1 - Forks: 0

janschneida/Clinical-SimSpace-Explorer

Tool for EHR & mutation profile based patient clustering & visualization, developed in partial fulfillment of the requirements for the course “Medical Informatics” at the University Medical Center Göttingen.

Language: Python - Size: 18.1 MB - Last synced: 4 months ago - Pushed: 8 months ago - Stars: 0 - Forks: 0

mixOmicsTeam/mixOmics

Development repository for the Bioconductor package 'mixOmics '

Language: R - Size: 16.1 MB - Last synced: 7 months ago - Pushed: 7 months ago - Stars: 126 - Forks: 47

s1monj/nft-peppers

Generative Art NFTs From Genomic Data

Language: JavaScript - Size: 118 MB - Last synced: 8 months ago - Pushed: over 2 years ago - Stars: 20 - Forks: 8

j-andrews7/OneLinerOmics

One liner analyses and visualizations for bulk RNA-seq and ChIP-seq data

Language: R - Size: 732 KB - Last synced: 8 days ago - Pushed: over 2 years ago - Stars: 7 - Forks: 1

Byronxy/GEO

learn R by rote

Language: HTML - Size: 10.4 MB - Last synced: 9 months ago - Pushed: about 5 years ago - Stars: 0 - Forks: 0

arvkevi/tgviz

1000 Genomes Project population visualizations using dimensionality reduction

Language: Python - Size: 51.9 MB - Last synced: 7 months ago - Pushed: over 1 year ago - Stars: 9 - Forks: 5

thierrygosselin/grur

grur: an R package tailored for RADseq data imputations

Language: R - Size: 7.46 MB - Last synced: 12 days ago - Pushed: over 3 years ago - Stars: 7 - Forks: 0

jcvi-plant-genomics/medicmine

MedicMine - an InterMine with Medicago truncatula genomic data

Language: Java - Size: 629 KB - Last synced: 9 months ago - Pushed: about 6 years ago - Stars: 0 - Forks: 0

alexpreynolds/tabix-service

A nodejs-based service for requests for tabix-indexed genomic data

Language: JavaScript - Size: 124 KB - Last synced: 10 months ago - Pushed: over 4 years ago - Stars: 2 - Forks: 4

Computational-Rare-Disease-Genomics-WHG/VuTR

Web app to visualise the consequences of high-impact 5' UTR Variants

Language: JavaScript - Size: 218 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 4 - Forks: 0

kaymers/MetaG

MetaG is a comprehensive metagenomic visualization tool. MetaG displays lower dimensional representations of high throughput metagenomic sequence reads using deep-learning techniques. MetaG will provide additional taxonomic details of the composition of a given metagenome using its pipeline based on BLAST.

Language: Python - Size: 11.1 MB - Last synced: 10 months ago - Pushed: about 3 years ago - Stars: 0 - Forks: 1

umccr/igv Fork of igvteam/igv

Interactive Genome Viewer with built-in Amazon Web Services support

Language: Java - Size: 408 MB - Last synced: 28 days ago - Pushed: 10 months ago - Stars: 2 - Forks: 0

jkissing/jcklab-public

Kissinger Research Group Shared Code

Size: 1000 Bytes - Last synced: 2 months ago - Pushed: 10 months ago - Stars: 0 - Forks: 0

epiviz/epiviz-desktop-app

Desktop app for epiviz

Language: JavaScript - Size: 14.3 MB - Last synced: about 1 month ago - Pushed: almost 4 years ago - Stars: 10 - Forks: 0

fjdf/slaMEM

Finding Maximal Exact Matches (MEMs) using a Sampled LCP Array

Language: C - Size: 566 KB - Last synced: 7 months ago - Pushed: about 7 years ago - Stars: 10 - Forks: 5

OrangePomeranian/genomics_project

Genomic Analysis of Canis lupus with the use of Genomic Maps and Philogenetic Trees

Size: 32.4 MB - Last synced: 11 months ago - Pushed: 11 months ago - Stars: 0 - Forks: 0

biojs/generator-biojs-webcomponents 📦

Generate all the boilerplate for your next BioJS tool!

Language: JavaScript - Size: 422 KB - Last synced: 9 days ago - Pushed: about 3 years ago - Stars: 9 - Forks: 2

kandarpRJ/epidecodeR

Online version of tool is live

Language: R - Size: 2.31 MB - Last synced: 6 months ago - Pushed: almost 3 years ago - Stars: 3 - Forks: 0

BenjaminNarhMadey/R-Codes-for-Plant-Breeding-Genetics-Statistics-and-Genomics

This repository serves as a valuable resource for individuals engaged in data exploration, statistical analysis, and research within the domains of plant breeding, genetics, statistics, and genomics. The purpose of this repository is to share a collection of R codes that can be utilized by others for their own data analysis projects

Language: R - Size: 35.2 KB - Last synced: 4 months ago - Pushed: 11 months ago - Stars: 3 - Forks: 0

snystrom/vplot

A commandline tool for generating vplot matrices from paired end sequencing data such as MNase-seq, ATAC-seq, or CUT&RUN.

Language: Rust - Size: 134 KB - Last synced: 9 days ago - Pushed: about 2 years ago - Stars: 2 - Forks: 1

outbreak-info/R-outbreak-info

R package to access the genomics and epidemiology data and Research Library metadata compiled and standardized on outbreak.info.

Language: R - Size: 91.1 MB - Last synced: 9 months ago - Pushed: about 1 year ago - Stars: 17 - Forks: 9

node/awesome-circos

A curated list of amazingly awesome Circos resources

Size: 5.86 KB - Last synced: about 1 month ago - Pushed: about 1 year ago - Stars: 1 - Forks: 0

Related Keywords
genomics-visualization 148 genomics 83 bioinformatics 53 genomic-data-analysis 24 visualization 17 data-visualization 15 python 15 r 14 comparative-genomics 9 genomics-data 9 biology 6 genomics-analysis 6 bioconductor 6 epidemiology 6 javascript 6 phylogenetic-trees 5 genome-analysis 5 rstats 5 phylogenetics 5 rna-seq 5 microbial-genomics 5 genome 5 epigenetics 4 bioinformatics-pipeline 4 phylogenomics 4 data-science 4 sequence-alignment 4 circos 3 deep-learning 3 phylogeny 3 radseq-data 3 coverage 3 samtools 3 ngs 3 atac-seq 3 structural-variation 3 bacterial-genomes 3 nextflow 3 hacktoberfest 3 chip-seq 3 bioinformatics-analysis 3 clustering 3 variants 3 ggplot2 3 network-visualization 3 gbs 3 machine-learning 3 biological-data-analysis 3 genetics 3 covid-19 3 bioinformatics-visualization 3 dimensionality-reduction 3 sequencing 3 proteomics 3 radseq 3 epigenomics 3 html 2 artificial-intelligence 2 mnase-seq 2 alignment 2 igv 2 shiny-apps 2 imputation 2 genotyping-by-sequencing 2 genotype-likelihoods 2 filter 2 computational-biology 2 gwas 2 data-analysis 2 dna-sequences 2 gui 2 interactive-visualizations 2 r-package 2 transcriptomics 2 rstats-package 2 bootstrap 2 clustal 2 intermine 2 statistics 2 genome-annotation 2 biopython 2 dna 2 biojs 2 pathogens 2 hiv 2 cdc 2 python3 2 principal-component-analysis 2 circos-graphs 2 bacterial-genome-analysis 2 molecular-evolution 2 ggplot-extension 2 whole-genome-sequencing 2 vcf 2 bam 2 sars-cov-2 2 high-throughput-sequencing 2 epiviz 2 blast 2 synteny 2