Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub / biojava / biojava
:book::microscope::coffee: BioJava is an open-source project dedicated to providing a Java library for processing biological data.
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/biojava%2Fbiojava
Stars: 574
Forks: 376
Open Issues: 70
License: lgpl-2.1
Language: Java
Repo Size: 48.1 MB
Dependencies:
131
Created: about 11 years ago
Updated: 15 days ago
Last pushed: 15 days ago
Last synced: 15 days ago
Commit Stats
Commits: 5799
Authors: 115
Mean commits per author: 50.43
Development Distribution Score: 0.677
More commit stats: https://commits.ecosyste.ms/hosts/GitHub/repositories/biojava/biojava
Topics: bioinformatics, genomics, java, parser-library, pdb, protein-data-bank, protein-modification, protein-sequences, protein-structure, sequence-alignment, structural-bioinformatics, structure-alignment
Files
Dependencies
- javax.xml.bind:jaxb-api
- junit:junit
- org.apache.logging.log4j:log4j-api
- org.apache.logging.log4j:log4j-core
- org.apache.logging.log4j:log4j-slf4j-impl
- org.glassfish.jaxb:jaxb-runtime
- org.junit.jupiter:junit-jupiter-engine
- org.junit.jupiter:junit-jupiter-params
- org.junit.vintage:junit-vintage-engine
- org.slf4j:slf4j-api
- com.google.guava:guava 31.1-jre compile
- org.biojava:biojava-alignment 6.0.6-SNAPSHOT compile
- org.biojava:biojava-core 6.0.6-SNAPSHOT compile
- org.apache.logging.log4j:log4j-api
- org.apache.logging.log4j:log4j-core
- org.apache.logging.log4j:log4j-slf4j-impl
- org.slf4j:slf4j-api
- junit-addons:junit-addons 1.4 test
- junit:junit test
- junit:junit
- org.apache.logging.log4j:log4j-api
- org.apache.logging.log4j:log4j-core
- org.apache.logging.log4j:log4j-slf4j-impl
- org.biojava:biojava-structure 6.0.6-SNAPSHOT
- org.junit.jupiter:junit-jupiter-engine
- org.junit.jupiter:junit-jupiter-params
- org.junit.vintage:junit-vintage-engine
- org.slf4j:slf4j-api
- net.sourceforge.jmol:jmol 13.0.14
- org.apache.logging.log4j:log4j-api
- org.apache.logging.log4j:log4j-core
- org.apache.logging.log4j:log4j-slf4j-impl
- org.biojava:biojava-alignment 6.0.6-SNAPSHOT
- org.biojava:biojava-core 6.0.6-SNAPSHOT
- org.biojava:biojava-structure 6.0.6-SNAPSHOT
- org.biojava:biojava-structure-gui 6.0.6-SNAPSHOT
- org.slf4j:slf4j-api
- junit:junit test
- org.biojava:biojava-alignment 6.0.6-SNAPSHOT compile
- org.biojava:biojava-core 6.0.6-SNAPSHOT compile
- org.rcsb:mmtf-api ${mmtf.version} compile
- org.rcsb:mmtf-codec ${mmtf.version} compile
- org.rcsb:mmtf-serialization ${mmtf.version} compile
- java3d:vecmath 1.3.1
- javax.xml.bind:jaxb-api
- org.apache.logging.log4j:log4j-api
- org.apache.logging.log4j:log4j-core
- org.apache.logging.log4j:log4j-slf4j-impl
- org.glassfish.jaxb:jaxb-runtime
- org.jgrapht:jgrapht-core 1.4.0
- org.junit.jupiter:junit-jupiter-engine
- org.junit.jupiter:junit-jupiter-params
- org.junit.vintage:junit-vintage-engine
- org.rcsb:${ciftools.artifact} ${ciftools.version}
- org.slf4j:slf4j-api
- junit:junit test
- xmlunit:xmlunit 1.6 test
- org.biojava:biojava-core 6.0.6-SNAPSHOT compile
- org.biojava:biojava-structure 6.0.6-SNAPSHOT compile
- net.sourceforge.jmol:jmol 14.31.10
- org.apache.logging.log4j:log4j-api
- org.apache.logging.log4j:log4j-core
- org.apache.logging.log4j:log4j-slf4j-impl
- org.biojava:jcolorbrewer 5.2
- org.slf4j:slf4j-api
- junit:junit test
- javax.xml.bind:jaxb-api 2.3.1
- org.apache.logging.log4j:log4j-api 2.17.1
- org.apache.logging.log4j:log4j-core 2.17.1
- org.apache.logging.log4j:log4j-slf4j-impl 2.17.1
- org.biojava.thirdparty:forester 1.039
- org.glassfish.jaxb:jaxb-runtime 2.3.5
- org.slf4j:slf4j-api 1.7.30
- junit:junit 4.13.2 test
- org.junit.jupiter:junit-jupiter-engine 5.7.2 test
- org.junit.jupiter:junit-jupiter-params 5.7.2 test
- org.junit.vintage:junit-vintage-engine 5.7.2 test
- actions/checkout v1 composite
- actions/setup-java v1 composite
- actions/checkout v1 composite
- actions/setup-java v1 composite