:book::microscope::coffee: BioJava is an open-source project dedicated to providing a Java library for processing biological data.
biojava-aa-prop/pom.xml
maven
biojava-core/pom.xml
maven
- javax.xml.bind:jaxb-api
- junit:junit
- org.apache.logging.log4j:log4j-api
- org.apache.logging.log4j:log4j-core
- org.apache.logging.log4j:log4j-slf4j-impl
- org.glassfish.jaxb:jaxb-runtime
- org.junit.jupiter:junit-jupiter-engine
- org.junit.jupiter:junit-jupiter-params
- org.junit.vintage:junit-vintage-engine
- org.slf4j:slf4j-api
biojava-genome/pom.xml
maven
- com.google.guava:guava 31.1-jre compile
- org.biojava:biojava-alignment 6.0.6-SNAPSHOT compile
- org.biojava:biojava-core 6.0.6-SNAPSHOT compile
- org.apache.logging.log4j:log4j-api
- org.apache.logging.log4j:log4j-core
- org.apache.logging.log4j:log4j-slf4j-impl
- org.slf4j:slf4j-api
- junit-addons:junit-addons 1.4 test
- junit:junit test
- junit:junit
- org.apache.logging.log4j:log4j-api
- org.apache.logging.log4j:log4j-core
- org.apache.logging.log4j:log4j-slf4j-impl
- org.biojava:biojava-structure 6.0.6-SNAPSHOT
- org.junit.jupiter:junit-jupiter-engine
- org.junit.jupiter:junit-jupiter-params
- org.junit.vintage:junit-vintage-engine
- org.slf4j:slf4j-api
biojava-ontology/pom.xml
maven
- net.sourceforge.jmol:jmol 13.0.14
- org.apache.logging.log4j:log4j-api
- org.apache.logging.log4j:log4j-core
- org.apache.logging.log4j:log4j-slf4j-impl
- org.biojava:biojava-alignment 6.0.6-SNAPSHOT
- org.biojava:biojava-core 6.0.6-SNAPSHOT
- org.biojava:biojava-structure 6.0.6-SNAPSHOT
- org.biojava:biojava-structure-gui 6.0.6-SNAPSHOT
- org.slf4j:slf4j-api
- junit:junit test
- org.biojava:biojava-alignment 6.0.6-SNAPSHOT compile
- org.biojava:biojava-core 6.0.6-SNAPSHOT compile
- org.rcsb:mmtf-api ${mmtf.version} compile
- org.rcsb:mmtf-codec ${mmtf.version} compile
- org.rcsb:mmtf-serialization ${mmtf.version} compile
- java3d:vecmath 1.3.1
- javax.xml.bind:jaxb-api
- org.apache.logging.log4j:log4j-api
- org.apache.logging.log4j:log4j-core
- org.apache.logging.log4j:log4j-slf4j-impl
- org.glassfish.jaxb:jaxb-runtime
- org.jgrapht:jgrapht-core 1.4.0
- org.junit.jupiter:junit-jupiter-engine
- org.junit.jupiter:junit-jupiter-params
- org.junit.vintage:junit-vintage-engine
- org.rcsb:${ciftools.artifact} ${ciftools.version}
- org.slf4j:slf4j-api
- junit:junit test
- xmlunit:xmlunit 1.6 test
- org.biojava:biojava-core 6.0.6-SNAPSHOT compile
- org.biojava:biojava-structure 6.0.6-SNAPSHOT compile
- net.sourceforge.jmol:jmol 14.31.10
- org.apache.logging.log4j:log4j-api
- org.apache.logging.log4j:log4j-core
- org.apache.logging.log4j:log4j-slf4j-impl
- org.biojava:jcolorbrewer 5.2
- org.slf4j:slf4j-api
- junit:junit test
biojava-survival/pom.xml
maven
biojava-ws/pom.xml
maven
pom.xml
maven
- javax.xml.bind:jaxb-api 2.3.1
- org.apache.logging.log4j:log4j-api 2.17.1
- org.apache.logging.log4j:log4j-core 2.17.1
- org.apache.logging.log4j:log4j-slf4j-impl 2.17.1
- org.biojava.thirdparty:forester 1.039
- org.glassfish.jaxb:jaxb-runtime 2.3.5
- org.slf4j:slf4j-api 1.7.30
- junit:junit 4.13.2 test
- org.junit.jupiter:junit-jupiter-engine 5.7.2 test
- org.junit.jupiter:junit-jupiter-params 5.7.2 test
- org.junit.vintage:junit-vintage-engine 5.7.2 test
.github/workflows/master.yml
actions
- actions/checkout v1 composite
- actions/setup-java v1 composite
- actions/checkout v1 composite
- actions/setup-java v1 composite
Links
- Source: https://github.com/biojava/biojava
- JSON API: repos.ecosyste.ms
-
PURL:
pkg:github/biojava/biojava
Repository Details
- Stars 625
- Forks 395
- Open issues 69
- License lgpl-2.1
- Language Java
- Size 48.9 MB
- Created at almost 13 years ago
- Updated at 6 days ago
- Pushed at 2 months ago
- Last synced at 4 days ago
- Dependencies parsed at 131
Commit Stats
- Commits 5799
- Authors 115
- Mean commits per author 50.43
- DDS 0.677
- More commit stats