jdupej9000/warp9

Toolkit for geometric morphometry.

Language: C# - Size: 3.17 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 0 - Forks: 0

pysal/momepy

Urban Morphology Measuring Toolkit

Language: Python - Size: 107 MB - Last synced at: 8 days ago - Pushed at: 2 months ago - Stars: 539 - Forks: 66

noshita/ktch

Model-based morphometrics in Python

Language: Python - Size: 2.28 MB - Last synced at: 12 days ago - Pushed at: 12 days ago - Stars: 11 - Forks: 0

benchmark-urbanism/cityseer-api

Computational tools for urban analysis

Language: Python - Size: 284 MB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 106 - Forks: 9

rmk118/morphmat

Modeling Size at Maturity Using Morphometric Data

Language: R - Size: 7.68 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 0

thomas-leduc/t4gpd

Set of tools based on Python, GeoPandas and Shapely to achieve urban geoprocessing

Language: Python - Size: 4.21 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 9 - Forks: 1

kedar-codes/hippo_morph

Current code for my hippocampal morphometry workflow, based on the hippodeep_pytorch segmentation program and the SlicerSALT shape analysis software.

Language: Python - Size: 182 KB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 1

millacarmona/morphospace

A package for people who can’t visualize morphospaces good and who wanna learn to do other geometric morphometrics stuff good too.

Language: R - Size: 179 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 6 - Forks: 1

psolymos/EDMAinR

Euclidean Distance Matrix Analysis in R

Language: R - Size: 50.6 MB - Last synced at: about 15 hours ago - Pushed at: almost 2 years ago - Stars: 4 - Forks: 2

vaipatel/morphops

Geometric Morphometrics in Python

Language: Python - Size: 120 KB - Last synced at: 11 days ago - Pushed at: over 3 years ago - Stars: 29 - Forks: 4

martin-lemay/pyBenD

Meandering system morphodynamic analysis (Python meander Bend Dynamics)

Language: Jupyter Notebook - Size: 19.1 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

mattiaghilardi/MorFishJ

A software package for fish traditional morphometric analysis from side view images

Language: ImageJ Macro - Size: 582 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

MomX/Momocs

:dove: Morphometrics using R

Language: HTML - Size: 345 MB - Last synced at: 24 days ago - Pushed at: over 1 year ago - Stars: 51 - Forks: 19

watanabe-j/avrevol

R package for average evolvability measures

Language: R - Size: 222 KB - Last synced at: 3 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

onnonuro/hifuku

Language: Jupyter Notebook - Size: 20.6 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0

Dmirandae/DasybasisPhylogeny

The phylogenetic analysis of the _Dasybasis_ genus

Language: R - Size: 13.1 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0

phgaem/myrcia_spp_delim

Integrative species delimitation in the Myrcia neoobscura complex

Language: R - Size: 2.76 MB - Last synced at: 8 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0

holsfastagz/morphostuff

A small Python package to aid morphometric analysis. Automates allometric correction and principal component analysis.

Language: Python - Size: 63.5 KB - Last synced at: 19 days ago - Pushed at: 8 months ago - Stars: 1 - Forks: 0

cjabradshaw/CoelacanthEvolution

Analyses of coelacanth morphometrics, disparity, phylogeny, and rate of evolution

Language: R - Size: 67.5 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 5 - Forks: 1

rscherrer/allocorrect

An R package to correct for allometry in sexually dimorphic traits

Language: R - Size: 6.98 MB - Last synced at: 18 days ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0

alejandroescobar264/morfometria_craneos

Adquisición y Análisis de Datos Morfométricos Craneales Multidimensionales

Language: HTML - Size: 181 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

kedar-codes/hippo_morph_old

The old, outdated code for my hippocampal morphometry pipeline.

Language: Shell - Size: 2.21 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

Jess050/honours-project

Language: R - Size: 112 MB - Last synced at: about 1 year ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 0

EcologicalTraitData/ETS

A Data Standard for Ecological Trait Datasets

Language: HTML - Size: 2.2 MB - Last synced at: about 1 year ago - Pushed at: about 6 years ago - Stars: 10 - Forks: 5

asyafiqe/landmark-free-morphometry-docker

Docker container for Landmark-free Morphometry code from A landmark-free morphometrics pipeline for high-resolution phenotyping: application to a mouse model of Down syndrome paper

Language: Dockerfile - Size: 3.91 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

Riverscapes/pyGUT

Geomorphic Unit Toolkit (GUT) - Python version

Language: Python - Size: 22.1 MB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 3

MomX/Momacs

:hammer_and_wrench: Interactive acquisition of morphometrics data

Language: HTML - Size: 411 KB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 3 - Forks: 3

timcdlucas/paleomorph

Geometric Morphometric Tools for Paleobiology

Language: R - Size: 143 KB - Last synced at: 23 days ago - Pushed at: about 8 years ago - Stars: 4 - Forks: 0

ivnols/oto_morpho_geo

Repositório para organizar os arquivos de landmark e cuvas das análises morfológicas dos otólitos para definir indicadores ecológicos nessas estruturas.

Language: PLSQL - Size: 178 MB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 1

kiwijuliandale/DJI_PH4_LaserAltimeter

DJI Phantom 3/4 laser altimeter installation

Language: C - Size: 27.3 MB - Last synced at: over 1 year ago - Pushed at: almost 5 years ago - Stars: 2 - Forks: 0

MomX/recipes

Various scripts that may find, one day, their way to MomX

Language: R - Size: 15.6 KB - Last synced at: almost 2 years ago - Pushed at: about 6 years ago - Stars: 0 - Forks: 0

MomX/Mombank 📦

:beers: Prototype for morphometric data repository

Size: 13.7 KB - Last synced at: almost 2 years ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0

akhileshsivaraman/VFE

Code and data used to create and write a new practical to teach morphometrics and evolutionary modelling at Imperial College London

Language: R - Size: 31.5 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0

josegcpa/wbs-prediction

Code repository for project focusing on blood cell detection and diagnostic prediction from peripheral blood slides

Language: R - Size: 81.1 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 1 - Forks: 1

MomX/MomX

:ring: Easily install and load MomX packages

Language: R - Size: 785 KB - Last synced at: almost 2 years ago - Pushed at: about 5 years ago - Stars: 4 - Forks: 0

seldenlab/perdiz3

Perdiz arrow points from Caddo burial contexts aid in defining discrete behavioral regions

Language: TeX - Size: 308 MB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

alihashmiii/Elliptical-Fourier-Descriptors

elliptical fourier descriptors with and without lobe contributions

Language: Mathematica - Size: 57.6 KB - Last synced at: over 2 years ago - Pushed at: almost 5 years ago - Stars: 11 - Forks: 4

watanabe-j/eigvaldisp

R package for statistics of eigenvalue dispersion indices

Language: R - Size: 188 KB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

watanabe-j/eigvaldispRcpp

Rcpp extension of eigvaldisp

Language: C++ - Size: 31.3 KB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

alihashmiii/Force-Inference

implementation of the Bayesian Force Inference technique based on the work of Ishihara and Sugimura

Language: Mathematica - Size: 17.5 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 3 - Forks: 2

flyconnectome/tools

Overview of neuroscience tools developed in the Fly Connectomics group (University of Cambridge) and the Jefferis lab (MRC-LMB)

Size: 840 KB - Last synced at: about 2 years ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0

nnbuainain/bird_morphometric_analyses

Analyses to differentiate birds species of the Tunchiornis genus with statistics and ML (clustering)

Language: R - Size: 782 KB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0

Osooluwatobia/cucurbitaceae-morpholeaf

Cucurbitaceae Leaves Morphometric Data and Code

Language: R - Size: 174 KB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0

ElsevierSoftwareX/SOFTX-D-20-00032 Fork of ldominguezruben/meanderstatisticstoolbox

Meander Statistics Toolbox (MStaT), is a packaging of codes developed on MATLAB, which allows the quantification of parameters descriptors of meandering channels (sinuosity, arc-wavelength, amplitude, curvature, inflection point, among other). To cite this software publication: https://www.sciencedirect.com/science/article/pii/S2352711021000194

Size: 24.5 MB - Last synced at: over 2 years ago - Pushed at: almost 4 years ago - Stars: 1 - Forks: 1

willkuhn/towd

Exploring the evolutionary history of dragonflies and damselflies (Odonata) from their wings!

Size: 5.25 MB - Last synced at: about 1 year ago - Pushed at: about 4 years ago - Stars: 0 - Forks: 0

alihashmiii/curvatureMeasure

for measuring curvature along the boundary of an image object

Language: Mathematica - Size: 753 KB - Last synced at: over 2 years ago - Pushed at: almost 5 years ago - Stars: 1 - Forks: 2

shaharkov/GPLmkBDMatch

A Matlab implementation accompanying the paper "Gaussian Process Landmarking on Manifolds".

Language: Matlab - Size: 4.53 MB - Last synced at: over 2 years ago - Pushed at: almost 7 years ago - Stars: 6 - Forks: 4

MomX/Momit

:honey_pot: Definition and utils for .mom, a minimalist file format for morphometrics data.

Language: PLSQL - Size: 14.2 MB - Last synced at: almost 2 years ago - Pushed at: about 5 years ago - Stars: 1 - Forks: 0

MomX/Momfarm

:tractor: Breeding shapes around Momocs

Language: R - Size: 1.68 MB - Last synced at: almost 2 years ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0

timcdlucas/EMMLi

A Maximum Likelihood Approach To The Analysis Of Modularity

Language: R - Size: 81.1 KB - Last synced at: about 2 months ago - Pushed at: over 8 years ago - Stars: 2 - Forks: 1

MomX/Momecs

:bear: Morphometric (and multivariate) explorer controlled by shiny

Language: R - Size: 4.13 MB - Last synced at: almost 2 years ago - Pushed at: about 7 years ago - Stars: 1 - Forks: 0