SlicerIGT/SlicerSoundControl

3D Slicer extension to generate sound for feedback during navigation

Language: Python - Size: 943 KB - Last synced at: about 6 hours ago - Pushed at: about 7 hours ago - Stars: 7 - Forks: 2

SlicerIGT/SlicerBoneReconstructionPlanner

3D Slicer module for planning mandible reconstruction surgery using fibula flap

Language: Python - Size: 31.5 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 31 - Forks: 12

OpenwaterHealth/SlicerOpenLIFU

A 3D Slicer extension for Openwater’s OpenLIFU (Low Intensity Focused Ultrasound) research platform, providing an advanced interface to features found in the OpenLIFU app.

Language: Python - Size: 7.47 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 1 - Forks: 2

SlicerLatinAmerica/SlicerTutorialMaker

This is an extension for 3D Slicer that contain tools for creating tutorials that can be automatically translated to multiple languages.

Language: Python - Size: 94.6 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 3 - Forks: 7

dalcalab/SlicerMultiverSeg

A 3D Slicer extension for interactive in-context segmentation with MultiverSeg

Language: Python - Size: 8.93 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 3 - Forks: 1

coendevente/SlicerNNInteractive

A 3D Slicer extension for efficient segmentation with nnInteractive.

Language: Python - Size: 10.3 MB - Last synced at: 5 days ago - Pushed at: 6 days ago - Stars: 73 - Forks: 6

SlicerMorph/SlicerMorph

Extension to import microCT data and conduct 3D morphometrics in Slicer

Language: Python - Size: 15.8 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 105 - Forks: 31

Slicer/ExtensionsIndex

Slicer extensions index

Language: Python - Size: 2.04 MB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 73 - Forks: 259

SlicerUltrasound/SlicerUltrasound

Modules for 3D Slicer

Language: Python - Size: 2.9 MB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 5 - Forks: 12

esheo-skia/Slicer-SegTemplateEditor

Save and apply reusable label groups for Segment Editor

Language: Python - Size: 1.5 MB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 0 - Forks: 0

IVarha/SlicerDBSCoalignment

Module for Utilisation of MER + MRI for DBS Surgeries

Language: Python - Size: 25.2 MB - Last synced at: 8 days ago - Pushed at: 8 days ago - Stars: 0 - Forks: 0

Project-MONAI/MONAILabel

MONAI Label is an intelligent open source image labeling and learning tool.

Language: Python - Size: 53.3 MB - Last synced at: 6 days ago - Pushed at: about 1 month ago - Stars: 722 - Forks: 224

mazurowski-lab/SlicerSegmentHumanBody

3D Slicer extension for SegmentAnyBone developed by Mazurowski Lab

Language: Python - Size: 59 MB - Last synced at: 14 days ago - Pushed at: 14 days ago - Stars: 3 - Forks: 3

SlicerMorph/SlicerDenseCorrespondenceAnalysis

Dense Correspondence Analysis for Surfaces

Language: Python - Size: 184 KB - Last synced at: 14 days ago - Pushed at: 14 days ago - Stars: 0 - Forks: 0

BrownBiomechanics/SlicerAutoscoperM

This 3D Slicer extension enables users to perform image registration.

Language: Python - Size: 2.31 MB - Last synced at: 18 days ago - Pushed at: 18 days ago - Stars: 5 - Forks: 4

DCBIA-OrthoLab/SlicerAutomatedDentalTools

A 3D Slicer extension to use AMASSS, ALI-CBCT and ALI-IOS

Language: Python - Size: 16.6 MB - Last synced at: 19 days ago - Pushed at: 19 days ago - Stars: 105 - Forks: 29

PyTomography/SlicerSPECTRecon

A 3D Slicer extension for SPECT reconstruction, built using PyTomography

Language: Python - Size: 166 MB - Last synced at: about 11 hours ago - Pushed at: 3 months ago - Stars: 22 - Forks: 8

lassoan/SlicerSegmentEditorExtraEffects

Many additional segmentation tools for 3D Slicer's Segment Editor

Language: Python - Size: 2.32 MB - Last synced at: 21 days ago - Pushed at: 6 months ago - Stars: 48 - Forks: 27

SlicerHeart/SlicerSurfaceMarkup

Extension to test the new grid surface markup with

Language: C++ - Size: 1.31 MB - Last synced at: 27 days ago - Pushed at: 27 days ago - Stars: 6 - Forks: 4

chir-set/SlicerExtraMarkups

Custom markups for Slicer

Language: C++ - Size: 2.78 MB - Last synced at: 30 days ago - Pushed at: 30 days ago - Stars: 8 - Forks: 4

KitwareMedical/SlicerTrame

3D Slicer extension to launch trame-slicer server directly from 3D Slicer

Language: CMake - Size: 46.9 KB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 4 - Forks: 1

Slicer/SlicerSOFA

3D Slicer extension to enable simulations using the SOFA framework

Language: Python - Size: 867 KB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 17 - Forks: 7

kedar-codes/hippo_morph

Current code for my hippocampal morphometry workflow, based on the hippodeep_pytorch segmentation program and the SlicerSALT shape analysis software.

Language: Python - Size: 182 KB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 1

kyliekeijzer/Slicer-PET-MUST-segmenter

MUltiple SUV Thresholding (MUST)-segmenter is a semi-automated PET image segmentation tool that enables delineation of multiple lesions at once, and extracts the lesions' features.

Language: Python - Size: 129 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 9 - Forks: 2

bowang-lab/MedSAMSlicer

3D Slicer Plugin for Segment anything in medical images

Language: Python - Size: 112 MB - Last synced at: 23 days ago - Pushed at: 2 months ago - Stars: 231 - Forks: 26

QIICR/dcmqi

dcmqi (DICOM for Quantitative Imaging) is a C++ library for conversion between imaging research formats and the standard DICOM representation for image analysis results

Language: C++ - Size: 17.3 MB - Last synced at: 17 days ago - Pushed at: 17 days ago - Stars: 257 - Forks: 63

radxtools/collageradiomics

Python Implementation of the CoLlAGe radiomics descriptor. CoLlAGe captures subtle anisotropic differences in disease pathologies by measuring entropy of co-occurrences of voxel-level gradient orientations on imaging computed within a local neighborhood.

Language: Python - Size: 2.83 MB - Last synced at: 10 days ago - Pushed at: almost 2 years ago - Stars: 18 - Forks: 12

MorphoCloud/SlicerMorphoDepot

A distributed, github based platform to share and collaborate on segmentations using 3D Slicer

Language: Python - Size: 493 KB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 1 - Forks: 1

SlicerRt/SlicerRT

Open-source toolkit for radiation therapy research, an extension of 3D Slicer. Features include DICOM-RT import/export, dose volume histogram, dose accumulation, external beam planning (TPS), structure comparison and morphology, isodose line/surface generation, etc.

Language: C++ - Size: 60.8 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 133 - Forks: 61

DCBIA-OrthoLab/SlicerDentalModelSeg

This extension aims to provide a GUI for a deep-learning automated teeth segmentation tool that we developed at the University of North Carolina in Chapel Hill in collaboration with the University of Michigan in Ann Arbor.

Language: Python - Size: 24.9 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 56 - Forks: 14

SlicerHeart/SlicerHeart

3D Slicer extension for cardiac analysis

Language: Python - Size: 39.6 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 135 - Forks: 42

QIICR/QuantitativeReporting

Segmentation-based measurements with DICOM import and export of the results.

Language: Python - Size: 31.8 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 25 - Forks: 25

KitwareMedical/SlicerSkeletalRepresentation

Collection of Skeletal Model Extensions for 3D Slicer/SlicerSALT

Language: Python - Size: 16.7 MB - Last synced at: 5 days ago - Pushed at: about 2 months ago - Stars: 5 - Forks: 11

NIRALUser/ShapePopulationViewer

ShapePopulationViewer is a software that allows you to dynamically interact with multiple surfaces at the same time

Language: C++ - Size: 2.59 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 2 - Forks: 16

netstim/SlicerANTs

This extension implements ANTs Registration into Slicer

Language: Python - Size: 1.6 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 6 - Forks: 6

4burakfe/SlicerRadioembolizationDosimetry

Taranis - Radiembolization Dosimetry. A simple module that allows users to perform voxel-based dosimetry with patient-relative and absolute calibration methods for treatments of liver tumors with Y-90 microspheres.

Language: Python - Size: 2.3 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 0 - Forks: 0

Slicer/LandmarkRegistration

An interactive registration tool that manages viewing and manipulating of sets of fiducials

Language: Python - Size: 597 KB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 6 - Forks: 25

ALive-research/Slicer-Liver

3D Slicer extension for liver analysis and therapy planning

Language: C++ - Size: 49.2 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 20 - Forks: 9

payabvashlab/SlicerDeid

DeIdentification head CT dicom

Language: Python - Size: 662 KB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 0 - Forks: 0

pnlbwh/ukftractography

Language: C - Size: 202 MB - Last synced at: 20 days ago - Pushed at: 20 days ago - Stars: 27 - Forks: 30

SlicerMorph/SlicerMEMOS

Mouse Embryo Multi-Organ Segmentations

Language: Python - Size: 1.5 MB - Last synced at: about 2 months ago - Pushed at: 2 months ago - Stars: 5 - Forks: 3

SlicerMorph/SlicerANTsPy

module and GUI for antspy

Language: Python - Size: 1.22 MB - Last synced at: 5 days ago - Pushed at: 2 months ago - Stars: 0 - Forks: 5

Atracsys/SlicerAstmPhantomTest

This software is a module for 3D Slicer to perform the accuracy test of a tracking system as described in the ASTM standard F2554.

Language: Python - Size: 127 MB - Last synced at: 5 days ago - Pushed at: 6 days ago - Stars: 14 - Forks: 3

SlicerMorph/SlicerPhotogrammetry

Language: Python - Size: 127 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 1 - Forks: 1

cpinter/SlicerSegmentationVerification

Tools for verifying the result of AI segmentation.

Language: Python - Size: 1.87 MB - Last synced at: about 1 month ago - Pushed at: 4 months ago - Stars: 5 - Forks: 1

lassoan/SlicerElastix

This extension makes available Elastix medical image registration toolkit (http://elastix.isi.uu.nl/) available in Slicer.

Language: Python - Size: 2.75 MB - Last synced at: 28 days ago - Pushed at: 5 months ago - Stars: 53 - Forks: 30

KitwareMedical/Slicer-CameraPath

Slicer module for Intelligent Virtual Surgical Planning

Language: C++ - Size: 839 KB - Last synced at: 5 days ago - Pushed at: about 3 years ago - Stars: 5 - Forks: 3

KitwareMedical/SlicerCBCTToothSegmentation

Slicer extension for automated segmentation of individual teeth in cone-beam CT dental scans using a deep-learning based approach.

Language: Python - Size: 2.22 MB - Last synced at: 2 months ago - Pushed at: 8 months ago - Stars: 16 - Forks: 7

jmhuie/SlicerBiomech

Extension for the collection and analysis of biomechanical data from 3D specimen data

Language: Python - Size: 96.9 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 5 - Forks: 2

KitwareMedical/SlicerVirtualReality

A Slicer extension that enables user to interact with a Slicer scene using virtual reality.

Language: C++ - Size: 1.48 MB - Last synced at: 5 days ago - Pushed at: 9 months ago - Stars: 125 - Forks: 59

jamzad/SlicerMassVision

A 3D Slicer module for end-to-end analysis of mass spectrometry imaging data

Language: Python - Size: 186 MB - Last synced at: 18 days ago - Pushed at: 18 days ago - Stars: 2 - Forks: 2

jlulloaa/SlicerSeQ-DCEMRI

Slicer Extension to derive semi-quantitative parameters from DCE-MRI datasets

Language: Python - Size: 15.1 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 1 - Forks: 1

Project-MONAI/SlicerMONAIViz

MONAIViz - 3D Slicer Extension

Language: Python - Size: 1.75 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 24 - Forks: 8

lorenaromeo/SlicerClassAnnotation

Extension for 3D Slicer that enables the classification of clinical image datasets generating CSV reports and organized output folders for analysis.

Language: Python - Size: 283 KB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 0 - Forks: 0

gaudot/SlicerDentalSegmentator

3D Slicer extension for fully-automatic segmentation of CT and CBCT dental volumes.

Language: Python - Size: 10.8 MB - Last synced at: 2 months ago - Pushed at: 5 months ago - Stars: 93 - Forks: 13

vincenzocivale/UnityIGTConnector

UnityIGTConnector is a Unity integration of the OpenIGTLink protocol, allowing for real-time communication and advanced visualization of medical data in mixed reality applications. Perfect for enhancing surgical support with HoloLens 2

Language: C# - Size: 196 MB - Last synced at: about 2 months ago - Pushed at: 7 months ago - Stars: 4 - Forks: 1

HOA-2/SlicerNeuroSegmentation

NeuroSegmentation extension for 3D Slicer

Language: Python - Size: 5.49 MB - Last synced at: 2 months ago - Pushed at: about 1 year ago - Stars: 16 - Forks: 2

KitwareMedical/SlicerPythonTestRunner

Python test runner extension for 3D Slicer based on PyTest and PyTest JSON Report

Language: Python - Size: 840 KB - Last synced at: 2 months ago - Pushed at: 3 months ago - Stars: 3 - Forks: 1

NIRALUser/SPHARM-PDM

Shape analysis has become of increasing interest to the medical community due to its potential to precisely locate morphological changes between healthy and pathological structures. SPHARM-PDM is a tool that computes point-based models using a parametric boundary description for the computing of Shape analysis.

Language: C++ - Size: 5.99 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 50 - Forks: 22

KitwareMedical/SlicerNNUnet

3D Slicer nnUNet integration to streamline usage for nnUNet based AI extensions.

Language: Python - Size: 682 KB - Last synced at: 2 months ago - Pushed at: 5 months ago - Stars: 34 - Forks: 6

Kitware/BoneTextureExtension

Slicer extensions for computing feature maps of N-Dimensional images using well-known texture analysis methods.

Language: Python - Size: 38.6 MB - Last synced at: about 1 month ago - Pushed at: 3 months ago - Stars: 10 - Forks: 10

JBeninca/SlicerStereotaxia

Slicer stereotatic frame 3D coordinates calculus.-

Language: Python - Size: 29.6 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 7 - Forks: 6

mprires/SlicerMOOSE

Slicer extension for MOOSE

Language: Python - Size: 19.2 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

conze/SlicerPolycysticKidneySeg

3D Slicer extension for automatic polycystic kidney segmentation from MR and CT scans

Language: Python - Size: 2.14 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

ImagingDataCommons/SlicerIDCBrowser

A 3D Slicer extension to support access to the content of NCI Imaging Data Commons

Language: Python - Size: 1.08 MB - Last synced at: about 1 month ago - Pushed at: 7 months ago - Stars: 6 - Forks: 5

DCBIA-OrthoLab/MFSDA_Python Fork of BIG-S2/MFSDA_Python

Multivariate Functional Shape Data Analysis in Python (MFSDA_Python) is a Python based package for statistical shape analysis. A multivariate varying coefficient model is introduced to build the association between the multivariate shape measurements and demographic information and other clinical, biological variables. Statistical inference, i.e., hypothesis testing, is also included in this package, which can be used in investigating whether some covariates of interest are significantly associated with the shape information. The hypothesis testing results are further used in clustering based analysis, i.e., significant suregion detection. This MFSDA package is developed by Chao Huang and Hongtu Zhu from the BIG-S2 lab.

Language: Python - Size: 14.5 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 3 - Forks: 10

LOAMRI/Slicer-DTI-ALPS

Slicer Module to calculate the diffusion tensor image analysis along the perivascular space (DTI-ALPS)

Language: Python - Size: 1.24 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 5 - Forks: 2

fepegar/SlicerPyTorch

This extension contains only a module with some tools to install PyTorch inside Slicer, using the best possible version.

Language: Python - Size: 478 KB - Last synced at: 2 months ago - Pushed at: about 1 year ago - Stars: 34 - Forks: 5

ChenXiang96/SlicerColoc-Z-Stats

This is a 3D Slicer extension for computing proteins' colocalization (spatial overlap between different channels) of Z-stack images.

Language: Python - Size: 62.5 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 3 - Forks: 1

lukaskonietzka/SlicerToothAnalyser

This 3D Slicer Extension provides specialized preprocessing, segmentation, and analysis features tailored for the analysis of tooth anatomy and pathology starting from µCT

Language: Python - Size: 7.15 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 2 - Forks: 0

fepegar/SlicerEPISURG

3D Slicer module to visualize the EPISURG dataset and segment postoperative brain resection cavities using deep learning.

Language: Python - Size: 1.41 MB - Last synced at: 2 months ago - Pushed at: over 4 years ago - Stars: 9 - Forks: 1

Slicer/SlicerDeveloperToolsForExtensions

Set of tools to help developers when creating new Slicer extensions

Language: Python - Size: 170 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 7 - Forks: 7

SlicerRt/SegmentRegistration

3D Slicer extension for segment registration (aka fusion, contour propagation)

Language: Python - Size: 1.13 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 11 - Forks: 5

SlicerDMRI/slicerdmri.github.io

SlicerDMRI organization website repository

Language: TeX - Size: 427 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 3

KitwareMedical/SlicerIMSTK

Extension for 3D slicer that enables user to prototype real-time multi-modal surgical simulation scenarios by leveraging iMSTK

Language: CMake - Size: 368 KB - Last synced at: 5 days ago - Pushed at: almost 3 years ago - Stars: 7 - Forks: 5

QIICR/Slicer-PETDICOMExtension

3D Slicer extension containing tools for importing DICOM PET series

Language: C++ - Size: 274 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 18 - Forks: 12

SlicerIGT/LumpNav

Slicer extension for ultrasound-guided breast tumor resection (lumpectomy)

Language: Jupyter Notebook - Size: 6.08 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 9 - Forks: 10

KitwareMedical/SlicerEHRSandbox

Slicer extension for reading EHR data from a FHIR server and a DICOMweb server.

Language: Python - Size: 376 KB - Last synced at: 5 days ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 3

KitwareMedical/ShapeRegressionExtension

Computation and visualization of time-regressed shapes in a collection of 3D shape inputs associated to a linear variable

Language: Python - Size: 184 KB - Last synced at: 5 days ago - Pushed at: about 1 year ago - Stars: 4 - Forks: 7

KitwareMedical/SlicerITKPython

A Slicer extension for ITK's Python wrapping.

Language: CMake - Size: 6.84 KB - Last synced at: 5 days ago - Pushed at: about 8 years ago - Stars: 4 - Forks: 1

KitwareMedical/SlicerMixedReality

A Slicer extension that enables user to interact with a Slicer scene using mixed reality headset.

Language: C++ - Size: 103 KB - Last synced at: 5 days ago - Pushed at: almost 2 years ago - Stars: 5 - Forks: 0

Auditory-Biophysics-Lab/Slicer-ABLTemporalBoneSegmentation

3D Slicer extension featuring spacing resampling, fiducial registration, and rigid registration of temporal bone images.

Language: Python - Size: 1.1 MB - Last synced at: about 1 month ago - Pushed at: about 3 years ago - Stars: 19 - Forks: 2

Auditory-Biophysics-Lab/Slicer-BoneThicknessMapping

3D Slicer module that creates a gradient map representing the bone thickness of a volume using VTK ray-casting.

Language: Python - Size: 1.5 MB - Last synced at: about 1 month ago - Pushed at: about 1 year ago - Stars: 18 - Forks: 8

laboratory-for-translational-medicine/SlicerCineTrack

Module for 3D Slicer providing tracking tools and displacement visualizations

Language: Python - Size: 385 KB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 9 - Forks: 1

AnnaPSQ/Slicer-SLICSegmentEditorEffect

This 3DSlicer extension is an additional Segment Editor Effect that segments the master volume with the Simple Linear Iterative Clustering (SLIC) algorithm.

Language: Python - Size: 6.65 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 1 - Forks: 1

SlicerDMRI/SlicerDMRI

Diffusion MRI analysis and visualization in 3D Slicer open source medical imaging platform.

Language: C++ - Size: 8.37 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 78 - Forks: 27

LOAMRI/Slicer-ASLtoolkit

Slicer extension that applies image processing techniques for Arterial Spin Labeling (ASL) MRI protocols

Language: Python - Size: 115 KB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

fepegar/SlicerTorchIO

3D Slicer module for TorchIO.

Language: Python - Size: 6.97 MB - Last synced at: 2 months ago - Pushed at: about 1 year ago - Stars: 21 - Forks: 4

QIICR/PET-IndiC

UIowa QIN PET volume indices measurement tool for 3D Slicer

Language: Python - Size: 279 KB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 2

R-Vessel-X/SlicerRVXLiverSegmentation

3D Slicer plugin for Liver Anatomy Annotation by R-Vessel-X

Language: Python - Size: 60.2 MB - Last synced at: about 11 hours ago - Pushed at: 12 months ago - Stars: 35 - Forks: 8

zapaishchykova/SegmentationReview

Slicer3D extension for rating using Likert-type score Deep-learning generated segmentations, with segment editor functionality. Created to speed up the validation process done by a clinician - the dataset loads in one batch with no need to load masks and volumes separately.

Language: Python - Size: 17.7 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 25 - Forks: 9

CSIM-Toolkits/SlicerBrainVolumeRefinement

3D Slicer extension for the Brain Volume Refinement methods (BVeR)

Language: C++ - Size: 2.21 MB - Last synced at: 2 days ago - Pushed at: 5 months ago - Stars: 0 - Forks: 2

KitwareMedical/OsteotomyPlanner

3D Slicer extension to visualize and plan an osteotomy surgery.

Language: Python - Size: 2.9 MB - Last synced at: 2 months ago - Pushed at: over 3 years ago - Stars: 11 - Forks: 13

Slicer/SlicerSurfaceToolbox

Supports various cleanup and optimization processes on surface models

Language: C++ - Size: 579 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 6 - Forks: 14

ciroraggio/SlicerImageAugmenter

MONAI and PyTorch based medical image augmentation tool integrated in Slicer

Language: Python - Size: 3.2 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 2 - Forks: 1

SenonETS/SlicerIGSpineDeformity

This Module is designed for spine deformity analysis using freehand 3D ultrasound imaging, and the first module Lamina Landmark Labeling help find the Spinal Cord curve in 3D, which can be projected to three anatomical planes, e.g., for Scoliosis analysis using the Cobb angle when projected to the front back view.

Language: Python - Size: 1.58 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 9 - Forks: 2

uncbiag/SlicerUniGradICON

Slicer Extension for uniGradICON: A Foundation Model for Medical Image Registration

Language: Python - Size: 3.28 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 3 - Forks: 1

neuropacs/SlicerNeuropacs

The neuropacs™ system is a software application intended to receive and analyze diffusion MRI data from patients aged 40 years and older presenting with Parkinson’s disease (PD) symptoms. The neuropacs™ system provides a report to aid neuroradiologists and/or neurologists in identifying patients with Atypical Parkinsonism.

Language: Python - Size: 3.13 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

SlicerRt/SlicerDebuggingTools

Extension for 3D Slicer containing various tools for module development and debugging

Language: Python - Size: 3.74 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 24 - Forks: 7

lapdMouse/Slicer-lapdMouseBrowser

Language: Python - Size: 1.35 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 1