GitHub topics: quantitative-imaging
OHIF/Viewers
OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages
Language: TypeScript - Size: 267 MB - Last synced at: 4 days ago - Pushed at: 5 days ago - Stars: 3,556 - Forks: 3,637
DanuserLab/cmeAnalysis
clathrin-mediated endocytosis analysis
Language: MATLAB - Size: 81.4 MB - Last synced at: 9 days ago - Pushed at: 9 days ago - Stars: 8 - Forks: 1
DanuserLab/u-inferforce
u-inferforce (Traction Force Microscopy) is a MATLAB software that reconstructs traction forces of cells adhered on elastic gel doped with beads.
Language: MATLAB - Size: 79.2 MB - Last synced at: 9 days ago - Pushed at: 9 days ago - Stars: 8 - Forks: 3
DanuserLab/u-segment
A Matlab software package to do 2D cell segmentation.
Language: MATLAB - Size: 76.1 MB - Last synced at: 11 days ago - Pushed at: 11 days ago - Stars: 1 - Forks: 0
DanuserLab/u-probe
Processing of raw ratiometric biosensor images (for example based on FRET) into fully corrected "ratio maps" or "activation maps" — images showing the localized activation of the biosensor.
Language: MATLAB - Size: 79.1 MB - Last synced at: 11 days ago - Pushed at: 11 days ago - Stars: 7 - Forks: 1
DanuserLab/u-register
Analyze local cell edge motions (e.g. protrusion and retraction) and to locally sample intracellular fluorescence signals in 2D fluorescence microscopy data.
Language: MATLAB - Size: 77.8 MB - Last synced at: 11 days ago - Pushed at: 11 days ago - Stars: 6 - Forks: 1
QIICR/QuantitativeReporting
Segmentation-based measurements with DICOM import and export of the results.
Language: Python - Size: 31.8 MB - Last synced at: 18 days ago - Pushed at: 18 days ago - Stars: 24 - Forks: 24
PyTomography/PyTomography
This repository enables easy and fast medical image reconstruction in Python.
Language: Python - Size: 119 MB - Last synced at: 16 days ago - Pushed at: 18 days ago - Stars: 128 - Forks: 26
QIICR/dcmqi
dcmqi (DICOM for Quantitative Imaging) is a C++ library for conversion between imaging research formats and the standard DICOM representation for image analysis results
Language: C++ - Size: 17.3 MB - Last synced at: 17 days ago - Pushed at: 17 days ago - Stars: 255 - Forks: 61
amatov/SegmentionCellEdge
Language: MATLAB - Size: 642 KB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 0
SlicerProstate/SlicerProstate
An extension to 3D Slicer to support quantitative imaging and image-guided interventions research in prostate cancer.
Language: C++ - Size: 1.41 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 20 - Forks: 9
olivier-bernard-creatis/olivier-bernard-creatis.github.io Fork of academicpages/academicpages.github.io
Website of Olivier Bernard, Professor at the university of Lyon (INSA) and Deputy Director of the CREATIS research laboratory
Language: Jupyter Notebook - Size: 148 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0
dicomtools/TriDFusion
TriDFusion (3DF) Medical Imaging Viewer
Language: MATLAB - Size: 18.1 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 18 - Forks: 2
wdika/mridc 📦
Data Consistency Toolbox for Magnetic Resonance Imaging
Language: Jupyter Notebook - Size: 12.2 MB - Last synced at: about 1 month ago - Pushed at: 12 months ago - Stars: 38 - Forks: 11
AIM-Harvard/SlicerRadiomics
A Slicer extension to provide a GUI around pyradiomics
Language: Python - Size: 955 KB - Last synced at: 6 months ago - Pushed at: 12 months ago - Stars: 105 - Forks: 48
OHIF/VTKPlugin 📦
OHIF Plugin for The Visualization Toolkit (VTK)
Language: JavaScript - Size: 73.2 KB - Last synced at: 16 days ago - Pushed at: over 6 years ago - Stars: 35 - Forks: 17
thierleft/liver-IVIMDWI
Intravoxel incoherent motion (IVIM) diffusion-weighted imaging (DWI) quantitative imaging biomarkers extraction from clinical liver MRI
Language: MATLAB - Size: 893 KB - Last synced at: 8 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0
sudo-de/MedImagePro-Advanced-Biomedical-Image-Analysis
Biomedical Image Processing involves applying computer algorithms to analyze and enhance medical images, such as X-rays or MRI scans. It aims to extract meaningful information, diagnose diseases, and aid in medical research by employing advanced image analysis techniques and computational tools.
Language: Jupyter Notebook - Size: 79.6 MB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 0 - Forks: 0
QIICR/dcmqi-guide
Learning materials for https://github.com/qiicr/dcmqi
Language: JavaScript - Size: 2.89 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 3 - Forks: 2
cimentaur/polyquant
Matlab toolbox for polyenergetic quantitative (polyquant) X-ray CT reconstruction with demos.
Language: MATLAB - Size: 167 MB - Last synced at: over 1 year ago - Pushed at: almost 6 years ago - Stars: 21 - Forks: 4
DanuserLab/QFSM
Quantitative Fluorescent Speckle Microscopy
Language: MATLAB - Size: 67.4 MB - Last synced at: almost 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
crad/infrastructure
This is the home for deployment scripts used to setup the Radiomics platform. This site was published at data.radiomics.io and maintained by @Kitware.
Language: Python - Size: 26.4 KB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 1
OHIF/OpenLayersPlugin
Example OHIF plugin based using OpenLayers
Language: JavaScript - Size: 9.77 KB - Last synced at: 12 days ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 1
SlicerProstate/SlicerPIRADS
3D Slicer extension for supporting PI-RADS v2 reading
Language: Python - Size: 1.3 MB - Last synced at: about 1 year ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 1