AIM-Harvard/pyradiomics

Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks. Support: https://discourse.slicer.org/c/community/radiomics

Language: Jupyter Notebook - Size: 53.3 MB - Last synced at: 7 days ago - Pushed at: 3 months ago - Stars: 1,232 - Forks: 516

Slicer/Slicer

Multi-platform, free open source software for visualization and image computing.

Language: C++ - Size: 122 MB - Last synced at: 7 days ago - Pushed at: 8 days ago - Stars: 1,907 - Forks: 596

eeulig/ldct-benchmark

A benchmark for deep learning-based low dose CT image denoising

Language: Python - Size: 9.58 MB - Last synced at: 13 days ago - Pushed at: about 2 months ago - Stars: 23 - Forks: 5

QIICR/dcmqi

dcmqi (DICOM for Quantitative Imaging) is a C++ library for conversion between imaging research formats and the standard DICOM representation for image analysis results

Language: C++ - Size: 17.3 MB - Last synced at: 23 days ago - Pushed at: 23 days ago - Stars: 255 - Forks: 61

notmatthancock/pylidc

An object relational mapping for the LIDC dataset using sqlalchemy.

Language: Python - Size: 13.5 MB - Last synced at: 2 days ago - Pushed at: 9 months ago - Stars: 105 - Forks: 45

ImagingInformatics/hackathon-dataset

Working repository to organize assets for the SIIM Stack

Language: Python - Size: 1.89 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 36 - Forks: 22

NVIDIA/clara-train-examples

Example notebooks demonstrating how to use Clara Train to build Medical Imaging Deep Learning models

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kirbyju/tcia-shared-cart-creator

A web GUI for creating TCIA "Shared Carts" to facilitate easier sharing of custom TCIA datasets via a URL.

Language: Python - Size: 3.07 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

kirbyju/TCIA_Notebooks

Notebooks for working with The Cancer Imaging Archive datasets. Have you written one? Submit a PR!

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jjjermiah/nbia-toolkit

Python package for programmatic access to the National Biomedical Imaging Archive (NBIA) and The Cancer Imaging Archive (TCIA)

Language: Python - Size: 1.92 MB - Last synced at: 26 days ago - Pushed at: 26 days ago - Stars: 7 - Forks: 0

kirbyju/simpleDicomViewer

A basic set of functions for viewing DICOM images and annotations. This is meant to be a quick and dirty solution for previewing data as opposed to a comprehensive viewer solution. PRs for suggested improvements are welcome!

Language: Python - Size: 65.6 MB - Last synced at: about 2 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0

Slicer/SlicerGitSVNArchive

:warning: OBSOLETE | Multi-platform, free open source software for visualization and image computing.

Language: C++ - Size: 448 MB - Last synced at: 5 months ago - Pushed at: about 3 years ago - Stars: 872 - Forks: 458

lescientifik/tcia_downloader

A thin python wrapper of the public TCIA Rest API

Language: Python - Size: 104 KB - Last synced at: 9 months ago - Pushed at: over 4 years ago - Stars: 4 - Forks: 0

ImagingInformatics/hackathon-images

DICOM data pertaining to studies in the hackathon dataset

Size: 3.2 GB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 8 - Forks: 6

QIICR/TCIABrowser

3D Slicer module for browsing and downloading medical imaging collections from The Cancer Imaging Archive (TCIA).

Language: Python - Size: 6.41 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 15 - Forks: 9

hilfikerp/TCIA-Python3-Downloader

The Cancer Imaging Archive (TCIA) Web Service Client Python Application

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pamelarussell/TCIApathfinder

R client for The Cancer Imaging Archive REST API

Language: R - Size: 5.06 MB - Last synced at: over 1 year ago - Pushed at: about 4 years ago - Stars: 9 - Forks: 5

ruefene/pyradise-example-data

Example data for the PyRaDiSe package examples

Size: 143 KB - Last synced at: almost 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

sharmalab/Datascope 📦

Interactive linked visual query system for large datasets

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nyukat/MRI_AI

This repository contains code that was used to train and evaluate deep learning models, as described in the article "Improving breast cancer diagnostics with artificial intelligence for MRI" by Jan Witowski et al.

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notZaki/CancerImagingArchive.jl

Julia interface for exploring and downloading data on The Cancer Imaging Archive (TCIA)

Language: Julia - Size: 502 KB - Last synced at: 13 days ago - Pushed at: 8 months ago - Stars: 2 - Forks: 2

SagaraBattousai/BrainLesionsGlial

Contains both high and low grade galial brain lesions.

Language: Python - Size: 23.4 MB - Last synced at: almost 2 years ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0

SagaraBattousai/BrainTumorProgression

Language: Python - Size: 41.4 MB - Last synced at: almost 2 years ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0

oncoramedical/tcia_bootstrap

Minimal docker compose and script to bootstrap a DICOM server with a TCIA collection.

Language: Python - Size: 13.7 KB - Last synced at: about 2 years ago - Pushed at: almost 4 years ago - Stars: 1 - Forks: 0

blezek/LIDCTooling

Language: Java - Size: 835 KB - Last synced at: about 2 years ago - Pushed at: about 7 years ago - Stars: 4 - Forks: 0

blezek/dfci

Collection of notes, scripts and randomness related to projects for Dana Farber Cancer Institute.

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