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GitHub / stianlagstad / chimeraviz
chimeraviz is an R package that automates the creation of chimeric RNA visualizations.
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/stianlagstad%2Fchimeraviz
Stars: 36
Forks: 14
Open Issues: 11
License: None
Language: R
Repo Size: 2.9 MB
Dependencies:
67
Created: over 7 years ago
Updated: about 1 month ago
Last pushed: 6 months ago
Last synced: 1 day ago
Commit Stats
Commits: 246
Authors: 16
Mean commits per author: 15.38
Development Distribution Score: 0.346
More commit stats: https://commits.ecosyste.ms/hosts/GitHub/repositories/stianlagstad/chimeraviz
Files
Dependencies
- bioconductor-annotationdbi
- bioconductor-annotationfilter
- bioconductor-biocstyle
- bioconductor-biostrings
- bioconductor-ensembldb
- bioconductor-genomeinfodb
- bioconductor-genomicalignments
- bioconductor-genomicranges
- bioconductor-graph
- bioconductor-gviz
- bioconductor-iranges
- bioconductor-org.hs.eg.db
- bioconductor-org.mm.eg.db
- bioconductor-rgraphviz
- bioconductor-rsamtools
- bioconductor-s4vectors
- r-argumentcheck
- r-base 3.6.1.*
- r-data.table
- r-devtools
- r-dplyr
- r-dt
- r-gridbase
- r-gtools
- r-knitr
- r-lintr
- r-magick
- r-plyr
- r-rcircos
- r-rcolorbrewer
- r-rmarkdown
- r-roxygen2
- r-testthat
- AnnotationFilter * depends
- Biostrings * depends
- GenomicRanges * depends
- Gviz * depends
- IRanges * depends
- S4Vectors * depends
- data.table * depends
- ensembldb * depends
- AnnotationDbi * imports
- BiocStyle * imports
- DT * imports
- GenomeInfoDb * imports
- GenomicAlignments * imports
- RCircos * imports
- RColorBrewer * imports
- Rgraphviz * imports
- Rsamtools * imports
- checkmate * imports
- dplyr * imports
- graph * imports
- graphics * imports
- grid * imports
- gtools * imports
- magick * imports
- methods * imports
- org.Hs.eg.db * imports
- org.Mm.eg.db * imports
- plyr * imports
- rmarkdown * imports
- devtools * suggests
- knitr * suggests
- lintr * suggests
- roxygen2 * suggests
- testthat * suggests