GitHub topics: annotation-pipeline
ncbi/rapt 📦
This RAPT repository has been retired as of December 2024. NCBI's Read assembly and Annotation Pipeline Tool (RAPT) was a pilot service.
Size: 19.7 MB - Last synced at: 20 days ago - Pushed at: 20 days ago - Stars: 57 - Forks: 17
clemgoub/dnaPipeTE
dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify Transposable Elements in small samples of NGS datasets. It is very useful to quantify the proportion of TEs in newly sequenced genomes since it does not require genome assembly and works on small datasets (< 1X).
Language: Dockerfile - Size: 381 MB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 41 - Forks: 10
