Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub topics: bgzip
cielavenir/7bgzf
bgzf/ciso/daxcr/dictzip/gzinga/migz/razf frontends using zlib/zlib-ng/7-zip/zopfli/libdeflate/miniz/libslz/igzip/cryptopp/kzip backends with parallel (de)compression. compilable with gcc/clang/icc/open64.
Language: C - Size: 4.12 MB - Last synced: 22 days ago - Pushed: 22 days ago - Stars: 10 - Forks: 2
divonlan/genozip
A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster too
Language: C - Size: 966 MB - Last synced: 14 days ago - Pushed: about 1 month ago - Stars: 149 - Forks: 10
4dn-dcic/pairix
1D/2D indexing and querying on bgzipped text file with a pair of genomic coordinates
Language: C - Size: 318 MB - Last synced: 19 days ago - Pushed: 4 months ago - Stars: 83 - Forks: 13
circulosmeos/gztool
extract random-positioned data from gzip files with no penalty, including gzip tailing like with 'tail -f' !
Language: C - Size: 1.29 MB - Last synced: 7 months ago - Pushed: 7 months ago - Stars: 115 - Forks: 12
4dn-dcic/Rpairix
R binder for pairix - 2D/1D genomic indexing and querying on bgzipped text file
Language: C - Size: 78.3 MB - Last synced: 4 months ago - Pushed: about 5 years ago - Stars: 7 - Forks: 4
billzt/gff3sort
GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools
Language: Perl - Size: 43.9 KB - Last synced: 7 months ago - Pushed: almost 4 years ago - Stars: 39 - Forks: 19
circulosmeos/bgztail
Continuous tail command (like `tail -f`) for bgzip files
Language: Perl - Size: 10.7 KB - Last synced: about 1 year ago - Pushed: almost 5 years ago - Stars: 5 - Forks: 0