Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub topics: boolean-networks
jcrozum/biobalm
The biologist's Boolean attractor landscape mapper, building Waddington landscapes from Boolean networks.
Language: Python - Size: 90.5 MB - Last synced: about 18 hours ago - Pushed: about 20 hours ago - Stars: 2 - Forks: 0
bnediction/scBoolSeq
scBoolSeq: scRNA-Seq data binarisation and synthetic generation from Boolean dynamics
Language: Python - Size: 215 KB - Last synced: 19 days ago - Pushed: 20 days ago - Stars: 4 - Forks: 0
jcrozum/pystablemotifs
Python library for attractor identification and control in Boolean networks
Language: Jupyter Notebook - Size: 3.57 MB - Last synced: 21 days ago - Pushed: 6 months ago - Stars: 26 - Forks: 7
pauleve/updating-modes-notebooks
Notebooks demonstrating colomoto.minibn for computing dynamics of Boolean networks with various update modes
Language: Jupyter Notebook - Size: 181 KB - Last synced: about 1 month ago - Pushed: almost 2 years ago - Stars: 1 - Forks: 0
bnediction/bonesis
Synthesis and Reprogramming of Most Permissive Boolean Networks
Language: Python - Size: 621 KB - Last synced: 2 days ago - Pushed: 2 days ago - Stars: 9 - Forks: 1
mathieubolteau/scRNA2BoNI
scRNA2BoNI - A general framwork to infer Boolean networks from scRNAseq data.
Language: Python - Size: 78.8 MB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 0 - Forks: 0
arnaudporet/kali
In silico therapeutic target discovery using network attractors: avoiding pathological phenotypes
Language: Go - Size: 982 KB - Last synced: 10 months ago - Pushed: about 2 years ago - Stars: 5 - Forks: 0
boolsi/boolsi
Distributed simulations and analysis of synchronous Boolean networks
Language: Python - Size: 627 KB - Last synced: 9 days ago - Pushed: over 1 year ago - Stars: 6 - Forks: 3
gmagannaDevelop/M2_Internship_Supplementary
Supplementary Materials to reproduce figures appearing on my M2 Internship Report
Language: Jupyter Notebook - Size: 5.22 MB - Last synced: over 1 year ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0
bnediction/reprogramming-with-bonesis
Executable paper and data demonstrating marker reprogramming of Boolean networks with BoNesis
Language: Jupyter Notebook - Size: 737 KB - Last synced: over 1 year ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0
arnaudporet/smoosim
Enhancing Boolean networks with continuous logical operators and edge tuning: smoothing simulations
Language: R - Size: 84 KB - Last synced: 4 months ago - Pushed: about 5 years ago - Stars: 0 - Forks: 3