Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

GitHub topics: chromatogram

Repositories

gear-genomics/tracy

Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files

Language: C++ - Size: 3.17 MB - Last synced: about 2 months ago - Pushed: 2 months ago - Stars: 94 - Forks: 19

hyraxbio/hyraxAbif 📦

ABIF parser, writer and generator

Language: Haskell - Size: 128 KB - Last synced: 8 days ago - Pushed: 6 months ago - Stars: 10 - Forks: 3

gear-genomics/sage

Sanger Trace Alignment

Language: JavaScript - Size: 809 KB - Last synced: about 2 months ago - Pushed: 7 months ago - Stars: 4 - Forks: 0

Krutash/GUI-program-for-serial-communication

The GUI program was designed to assist an in house developed chromatogram for data collection and data analysis. The developed software can help communicate with the device. I have attached the complete script for the software but most of the machine dependent libraries are there in the IGCAR research lab, so the online mode (data collection from prototype) will not work. However other analysis modes and functionalities will work.

Language: Python - Size: 250 KB - Last synced: 8 months ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 0

EverymanBio/chromatograms

A repository of data and notebooks for exploring the fungi DNA sequencing data collected.

Language: Jupyter Notebook - Size: 4.13 MB - Last synced: 8 months ago - Pushed: over 2 years ago - Stars: 1 - Forks: 0

eriksjolund/abi2xml

abi2xml is a command-line tool to convert an ABIF file to an XML file. ABIF files (also called ABI trace files) contain DNA sequence data and are e.g. produced by ABI PRISM TM 377 DNA sequencers. This software is written in C++ and released under the GPL license version 2.

Language: C++ - Size: 67.4 KB - Last synced: 7 months ago - Pushed: over 4 years ago - Stars: 1 - Forks: 0