Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub topics: sanger-sequencing
olgatsiouri1996/sanger_analysis_pipeline
x86-64 Pipeline used to trim and combine sanger raw data to retrieve a consesus read and other results
Language: Python - Size: 7.81 KB - Last synced: 3 days ago - Pushed: 5 days ago - Stars: 0 - Forks: 0
ponnhide/sangerseq_viewer
sangerseq_viewer is a python package to automatically visualize Sanger sequencing results and the corresponding annotated sequence map.
Language: Python - Size: 28.8 MB - Last synced: 5 days ago - Pushed: 5 days ago - Stars: 26 - Forks: 3
gear-genomics/tracy
Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files
Language: C++ - Size: 3.17 MB - Last synced: about 2 months ago - Pushed: 2 months ago - Stars: 94 - Forks: 19
gear-genomics/dicey
In-silico PCR, primer design and padlock design for in-situ sequencing
Language: C++ - Size: 344 KB - Last synced: about 2 months ago - Pushed: 6 months ago - Stars: 40 - Forks: 3
gear-genomics/silica
In-silico PCR amplification on complete genomes
Language: JavaScript - Size: 1.25 MB - Last synced: about 2 months ago - Pushed: 7 months ago - Stars: 9 - Forks: 0
BGI-flexlab/SOAPTyping
HLA typing for Sanger Based Test
Language: C++ - Size: 18.6 MB - Last synced: about 2 months ago - Pushed: about 1 year ago - Stars: 13 - Forks: 7
gear-genomics/indigo
Indigo: SNV and InDel Discovery in Chromatogram traces obtained from Sanger sequencing of PCR products
Language: JavaScript - Size: 2.72 MB - Last synced: about 2 months ago - Pushed: 7 months ago - Stars: 30 - Forks: 6
evagunawan/SYLENS
SYLENS: Sampling Yielding LEss Noticeable Samples
Language: Python - Size: 641 KB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 0 - Forks: 1
irahorecka/sequencing-primer-generator
A tool to batch-generate optimal DNA primers for Sanger sequencing. Output .xlsx file is directly compatible with IDT Oligo Entry.
Language: Python - Size: 63.5 KB - Last synced: 10 months ago - Pushed: 10 months ago - Stars: 2 - Forks: 0
JazzEd-EdTech/cromwell Fork of broadinstitute/cromwell
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
Language: Scala - Size: 40.5 MB - Last synced: about 1 month ago - Pushed: 11 months ago - Stars: 0 - Forks: 0
sgelias/AbiOrganizer
Extract and distribute ab1 files from Sanger DNA sequencing to folders of their respective owners.
Language: Python - Size: 5.86 KB - Last synced: about 2 months ago - Pushed: almost 4 years ago - Stars: 0 - Forks: 0
