GitHub topics: in-situ-sequencing
broadinstitute/pooled-cell-painting-profiling-recipe
:woman_cook: Recipe repository for image-based profiling of Pooled Cell Painting experiments
Language: Python - Size: 404 KB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 7 - Forks: 4
gear-genomics/padlock
Design padlock probes for in-situ sequencing
Language: HTML - Size: 710 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 1 - Forks: 0
gear-genomics/dicey
In-silico PCR, primer design and padlock design for in-situ sequencing
Language: C++ - Size: 384 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 47 - Forks: 4
wanglab-broad/ClusterMap
ClusterMap for multi-scale clustering analysis of spatial gene expression
Language: Jupyter Notebook - Size: 171 MB - Last synced at: 5 months ago - Pushed at: 10 months ago - Stars: 41 - Forks: 11
broadinstitute/pooled-cell-painting-profiling-template
:hammer_and_wrench: Use me to version control Pooled Cell Painting data and processing pipelines
Language: Python - Size: 425 KB - Last synced at: 10 months ago - Pushed at: 12 months ago - Stars: 2 - Forks: 3
LiuLab-Bioelectronics-Harvard/ClusterMap
ClusterMap for multi-scale clustering analysis of spatial gene expression
Language: Jupyter Notebook - Size: 300 MB - Last synced at: 5 months ago - Pushed at: about 3 years ago - Stars: 7 - Forks: 2
wahlby-lab/spage2vec
Language: Jupyter Notebook - Size: 57.3 MB - Last synced at: almost 2 years ago - Pushed at: almost 4 years ago - Stars: 11 - Forks: 4
