GitHub topics: chromatography
ethanbass/chromConverter
Parsers for chromatography data in R (HPLC-DAD/UV, GC-FID, MS)
Language: R - Size: 8.18 MB - Last synced at: about 10 hours ago - Pushed at: about 12 hours ago - Stars: 38 - Forks: 4
OpenChrom/openchrom
Visualization and Analysis of mass spectrometric and chromatographic data.
Language: Java - Size: 47.9 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 100 - Forks: 29
andrewruba/yassa_bio
Open-source engine for ELISA/ligand-binding assay analysis, validation and QC.
Language: Python - Size: 382 KB - Last synced at: 9 days ago - Pushed at: 9 days ago - Stars: 1 - Forks: 0
cadet/CADET-Core
The heart of CADET. A modular, fast, and accurate modeling and simulation framework for biotechnology processes.
Language: C++ - Size: 64 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 76 - Forks: 36
ethanbass/chromatographR
Toolset for the reproducible analysis of chromatography data in R (HPLC-DAD/UV, GC-FID).
Language: R - Size: 204 MB - Last synced at: 4 days ago - Pushed at: 11 days ago - Stars: 20 - Forks: 3
dgbowl/yadg
yadg: yet another datagram
Language: Python - Size: 108 MB - Last synced at: 4 days ago - Pushed at: 12 days ago - Stars: 42 - Forks: 16
RECETOX/galaxytools
Set of Galaxy tool wrappers developed at RECETOX
Language: Python - Size: 74.1 MB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 13 - Forks: 14
FAIRChemistry/Chromhandler
๐ chromhandler is a Python package designed to streamline the processing and analysis of chromatographic data, enabling efficient metadata enrichment and conversion to EnzymeML format for further analysis.
Language: Python - Size: 29.9 MB - Last synced at: 17 days ago - Pushed at: 17 days ago - Stars: 5 - Forks: 0
janpeter19/BPL_IEC_operation
Material for model of ion exchange chromatography
Language: Jupyter Notebook - Size: 43.8 MB - Last synced at: 18 days ago - Pushed at: 19 days ago - Stars: 1 - Forks: 0
janpeter19/BPL_IEC_validation
Material for model of ion exchange chromatography
Language: Jupyter Notebook - Size: 46.8 MB - Last synced at: 19 days ago - Pushed at: 19 days ago - Stars: 1 - Forks: 0
russi78/sig2dna
sig2dna transforms complex 1D analytical signals into DNA-like symbolic sequences, enabling efficient alignment and classification. This Python module supports various analytical techniques and is ideal for identifying substances in recycled materials. ๐โจ
Language: Python - Size: 34.2 MB - Last synced at: 19 days ago - Pushed at: 19 days ago - Stars: 0 - Forks: 0
rsc-ontologies/rsc-cmo
Chemical Methods Ontology
Language: Makefile - Size: 6.95 MB - Last synced at: 21 days ago - Pushed at: 21 days ago - Stars: 15 - Forks: 7
GerardOtiniano/chromatoPy
A python package for processing peak areas from raw HPLC and GC-FID data
Language: Python - Size: 836 MB - Last synced at: 26 days ago - Pushed at: 26 days ago - Stars: 3 - Forks: 2
elsci-io/peaksel-sdk
Universal API to work with chromatography data using Peaksel
Language: Python - Size: 1.34 MB - Last synced at: 4 days ago - Pushed at: 5 months ago - Stars: 5 - Forks: 0
singjc/arycal
ARYCAL: across run DIA-MS extracted ion chromatogram alignment written in Rust
Language: Rust - Size: 5.81 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 2 - Forks: 1
deweycw/corems-tools
Data processing tools for CoreMS assignments to HRMS datasets
Language: Python - Size: 16.5 MB - Last synced at: 8 days ago - Pushed at: about 1 month ago - Stars: 1 - Forks: 14
MathiasBuff/2D-LC-Vis
2D-LC Visualisation Tool, in development
Language: Python - Size: 18.2 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 0
pyahmed/PyCORN
A script to extract data from รKTA/UNICORN result-files (.res)
Language: Python - Size: 578 KB - Last synced at: 23 days ago - Pushed at: over 6 years ago - Stars: 52 - Forks: 30
rybakov-ks/ColorChemAnalysis
ColorChem Analysis is a web application designed for colorimetric determination of various analytical indicators, such as: pH levels, chemical concentrations, other measurable parameters based on color changes.
Size: 18.6 KB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 0 - Forks: 0
JonCasC/LC_column_calculator
A simple calculator for column scaling. Calculate flowrate and injection volume when switching between e.g. analytical and prep column.
Language: Python - Size: 2.93 KB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 0 - Forks: 0
ovitrac/sig2dna
๐ก๐งฌ sig2dna: Symbolic transformation of analytical signals into a DNA-like code for signal alignment and classification, blind source separation, pattern recognition, and more.
Language: Python - Size: 54.1 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 1 - Forks: 0
PyMassSpec/mh_utils
Utilities for handing ancillary files produced by MassHunter.
Language: Python - Size: 758 KB - Last synced at: 2 months ago - Pushed at: 3 months ago - Stars: 4 - Forks: 0
PyMassSpec/PyMassSpec-Plot
Plotting extension for PyMassSpec.
Language: Python - Size: 7.71 MB - Last synced at: 23 days ago - Pushed at: 2 months ago - Stars: 0 - Forks: 1
wojdyr/fityk
curve fitting (peak fitting) software
Language: C++ - Size: 15.1 MB - Last synced at: 4 months ago - Pushed at: 9 months ago - Stars: 274 - Forks: 56
HaasCP/mocca
Deprecated open-source Python project to analyze HPLCโDAD raw data.
Language: Python - Size: 517 MB - Last synced at: 13 days ago - Pushed at: about 1 year ago - Stars: 42 - Forks: 11
chemplexity/chromatography
functions for chromatography and mass spectrometry data analysis
Language: Matlab - Size: 17.2 MB - Last synced at: 4 months ago - Pushed at: about 2 years ago - Stars: 70 - Forks: 20
InnovativeOmics/Core-Match
Core scripts for FluoroMatch, LipidMatch, and PolyMatch
Language: R - Size: 19.6 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 2 - Forks: 1
LC-Seq/LC-Seq-Backend
A Python-based tool for chromatographic peak picking and analysis using the modular LC-Seq pipeline framework. The framework is designed to be highly configurable and extensible, allowing for the addition of custom components, configurations, and pipelines.
Language: Python - Size: 6.36 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0
Marta-Barea/tic-hs-gc-ims-waters-ml
Machine learning-based analytical approach for processing TIC data from contaminated water samples with PDPs, obtained through HS-GC-IMS
Language: R - Size: 2.32 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0
ethanbass/VPdtw
Variable Penalty Dynamic Time Warping
Language: R - Size: 497 KB - Last synced at: 23 days ago - Pushed at: 5 months ago - Stars: 2 - Forks: 1
janpeter19/CONF_2023_08_NPCW24
Notebook for IEC examples presented at NPCW in Trondheim, Norway, August 17-18, 2023.
Language: Jupyter Notebook - Size: 15.2 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 1 - Forks: 0
adamcseresznye/chromascope
Chromascope is a lightweight GUI application designed for visualizing mass spectrometry data.
Language: Rust - Size: 9.9 MB - Last synced at: 4 months ago - Pushed at: about 1 year ago - Stars: 3 - Forks: 1
turboseb/chromatography
*In Early Development* - Open Source Chromatography Simulation Program
Language: GDScript - Size: 3.56 MB - Last synced at: 5 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0
ethanbass/ShinyChromViewer
Shiny gadget for interactively viewing 3D chromatograms
Language: R - Size: 412 KB - Last synced at: 5 months ago - Pushed at: almost 3 years ago - Stars: 3 - Forks: 0
cheminfo/chromatography
Tools for storing, search and analyze GC/MS spectra
Language: JavaScript - Size: 25.8 MB - Last synced at: 22 days ago - Pushed at: 9 months ago - Stars: 10 - Forks: 7
JBrinco/Chromapy
Python Scripts for Chromatographic Data Processing
Language: Python - Size: 2.38 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0
JosieHong/3DMolCSP
[Analytical Chemistry] Enhanced Structure-Based Prediction of Chiral Stationary Phases for Chromatographic Enantioseparation from 3D Molecular Conformations
Language: Python - Size: 15.8 MB - Last synced at: 5 months ago - Pushed at: over 1 year ago - Stars: 6 - Forks: 2
mpho-mafata/Chromatographic-data
Documents scripts for processing raw chromatography data. It also includes related tasks such as visualizing raw data files for mass spec, UV, and fluorescence data.
Size: 27.9 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 1 - Forks: 0
cstingl/peakfit
An R script to fit acquired LC-MS peak data to a log-normal function.
Language: HTML - Size: 2.92 MB - Last synced at: over 1 year ago - Pushed at: about 4 years ago - Stars: 0 - Forks: 0
mpho-mafata/hplc_scanning
This repository is very specific. It contains a nested dataset of 301 files. Six signals are processed: four uv-vis and a fluorescence signal.
Language: R - Size: 5.2 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0
publiclab/SmART-Form
A community science effort to measure formaldehyde in the home environment
Language: Java - Size: 84.9 MB - Last synced at: 4 months ago - Pushed at: almost 6 years ago - Stars: 9 - Forks: 5
OrgMassSpec/OrgMassSpecR
Organic/biological mass spectrometry data analysis (development version).
Language: R - Size: 2.5 MB - Last synced at: almost 2 years ago - Pushed at: about 8 years ago - Stars: 27 - Forks: 7
mjr129/metaboclust
โ ๐๐๐๐ ๐๐ ๐ ๐๐๐๐๐๐ ๐๐ ๐๐๐ ๐๐๐๐ ๐๐๐๐๐๐๐๐๐๐ ๐๐ ๐๐๐๐๐๐๐๐๐ โ ๐๐๐๐ ๐๐๐๐ ๐๐ ๐๐๐ ๐๐๐๐๐๐๐๐๐ โ ๐๐๐๐๐๐ ๐๐๐ ๐๐๐ ๐๐๐๐๐๐๐๐๐ ๐๐๐๐ ๐ ๐๐ ๐๐๐ ๐๐๐๐๐๐ ๐๐๐๐๐๐๐
Language: C# - Size: 7.95 MB - Last synced at: almost 2 years ago - Pushed at: almost 8 years ago - Stars: 3 - Forks: 2
aretasg/PyCORN Fork of pyahmed/PyCORN
convert_res.py is a modified PyCORN utility to generate .png plots from .res files
Language: Python - Size: 594 KB - Last synced at: almost 2 years ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 0
alxdolphin/AKTAmercy
A Pythonic automaton that facilitates the post-processing of chromatographic data generated by AKTA Pure systems running UNICORN 7.0+
Language: Python - Size: 2.64 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 1 - Forks: 0
epicshepich/MChroma
A software for post-processing chromatograms
Language: Python - Size: 6.11 MB - Last synced at: 8 days ago - Pushed at: almost 4 years ago - Stars: 2 - Forks: 0
IncrementDaily/gc-fid-simulator
A Gas Chromatography Simulator built on the LSER Model
Language: Java - Size: 76.2 MB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 2 - Forks: 1
Maxen97/chrom-modelling
Modelling of chromatograpy with Python
Language: Python - Size: 45.9 KB - Last synced at: over 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
williamlweaver/SeparAgent
Agent-based Chromatography and Separations Simulator developed in NetLogo
Language: NetLogo - Size: 134 KB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
jAniceto/chromatography
A suite of chromatography programms: Breakthrough curve modelling, isotherm determination, parameters fitting...
Language: MATLAB - Size: 136 KB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 8 - Forks: 3
BradyAJohnston/chromr
Read and Plot FPLC Chromatograms
Language: R - Size: 4.78 MB - Last synced at: 5 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0
cihanerkut/unicoRn ๐ฆ
Import, analyze and visualize chromatography data from UNICORN software
Language: R - Size: 1.71 MB - Last synced at: over 2 years ago - Pushed at: over 8 years ago - Stars: 4 - Forks: 0
sbednarz/py4hplc
A simple library for batch processing of HPLC data with automatic peak detection and integration
Language: HTML - Size: 24.7 MB - Last synced at: over 2 years ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0
ajgiuliani/MSj.jl
A mass spectrometry package for Julia
Language: Julia - Size: 9.07 MB - Last synced at: over 2 years ago - Pushed at: almost 3 years ago - Stars: 6 - Forks: 0
qumuchegi/web-chromatography-analysis
web ๅนณๅฐ็่ฒ่ฐฑๆฐๆฎๅๆ่ฝฏไปถใ
Language: JavaScript - Size: 6 MB - Last synced at: over 2 years ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 4
xtracko/spectre
Deconvolution of hi-res GC/MS spectra
Language: Python - Size: 84 KB - Last synced at: over 2 years ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 0
CVUA-RRW/tidySpectR
An R package for tidy chemometric analysis.
Language: R - Size: 10.1 MB - Last synced at: over 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0
KBIbiopharma/CADET2.KBI
KBI Biopharma's fork of CADET2 to support Reveal-Chromatography application
Language: C++ - Size: 1.3 MB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 1 - Forks: 0
qumuchegi/RN_chromatography_analysis
่ฒ่ฐฑๅๆ็งปๅจ็ซฏ๏ผไฝฟ็จ RN ็ผๅ
Language: JavaScript - Size: 4.88 MB - Last synced at: over 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 2
conganhhcmus/Excel-Chromatography
Tools made to help my friend learn Chemistry !!!
Size: 2.25 MB - Last synced at: over 2 years ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0
hcji/deblank
This is a GUI for removing baseline ions from samples based on the blank sampe
Language: R - Size: 12.7 KB - Last synced at: over 2 years ago - Pushed at: over 7 years ago - Stars: 1 - Forks: 0
stigrs/lctoxy
Program for converting Ultimate 3000 RSCL ASCII chromatograms to XY data
Language: C++ - Size: 1.37 MB - Last synced at: over 2 years ago - Pushed at: almost 8 years ago - Stars: 0 - Forks: 0
