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GitHub topics: clustree

epigen/unsupervised_analysis

A general purpose Snakemake workflow and MrBiomics module to perform unsupervised analyses (dimensionality reduction & cluster analysis) and visualizations of high-dimensional data.

Language: Python - Size: 56 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 30 - Forks: 4

complextissue/pyclustree

A Python alternative to `clustree` for assessing single-cell RNA-sequencing clusters.

Language: Python - Size: 6.36 MB - Last synced at: about 2 hours ago - Pushed at: about 1 month ago - Stars: 8 - Forks: 0

h-escoffier/Mouse-cular_Denervation

Transcriptional and epigenetic signature of muscle tissue cells linked to atrophy

Language: Python - Size: 1.13 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 1 - Forks: 1

Related Keywords
clustree 3 single-cell 2 seurat 1 rna-seq 1 paga 1 multiomics 1 monocle3 1 atac-seq 1 scverse 1 pyclustree 1 workflow 1 visualization 1 unsupervised-learning 1 umap 1 snakemake 1 principal-component-analysis 1 pca 1 leiden-algorithm 1 high-dimensional-data 1 heatmap 1 dimensionality-reduction 1 densmap 1 data-visualization 1 data-science 1 clustering-algorithm 1 clustering 1 cluster-validation 1 cluster-analysis 1