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GitHub topics: graph-neural-network

azminewasi/Awesome-Graph-Research-ICML2024

All graph/GNN papers accepted at the International Conference on Machine Learning (ICML) 2024.

Size: 188 KB - Last synced at: 2 days ago - Pushed at: 8 months ago - Stars: 213 - Forks: 14

patnicolas/geometriclearning

Classes and methods for Geometric Deep Learning

Language: Python - Size: 140 MB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 5 - Forks: 3

graphnet-team/graphnet

A Deep learning library for neutrino telescopes

Language: Python - Size: 248 MB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 102 - Forks: 104

shahram-boshra/vqm24_database_process

VQM24 Database Process to Graphs

Language: Python - Size: 64.5 KB - Last synced at: 9 days ago - Pushed at: 9 days ago - Stars: 1 - Forks: 0

LucasUnizar/GNN-Workshop

For our hands-on Graph Neural Networks (GNNs) Workshops, to explore the fundamentals and applications of GNNs in machine learning.

Language: Python - Size: 553 MB - Last synced at: 10 days ago - Pushed at: 10 days ago - Stars: 0 - Forks: 0

zadanfai/GitGraph

An intelligent discovery tool to uncover relevant projects and collaboration paths on GitHub using GNN-powered analysis

Language: Jupyter Notebook - Size: 563 KB - Last synced at: 10 days ago - Pushed at: 10 days ago - Stars: 0 - Forks: 0

gtlover23/Project-Hydra-Quantitative-Trading-Lab

Explore Project-Hydra, an experimental quantitative trading lab using GNN+Transformer, DQN, and SAC+XGBoost for advanced trading strategies. πŸš€πŸ’»

Language: Python - Size: 380 KB - Last synced at: 11 days ago - Pushed at: 11 days ago - Stars: 0 - Forks: 0

SpaceLearner/Awesome-DynamicGraphLearning

Awesome papers about machine learning (deep learning) on dynamic (temporal) graphs (networks / knowledge graphs).

Language: Shell - Size: 176 KB - Last synced at: 4 days ago - Pushed at: about 1 month ago - Stars: 662 - Forks: 87

divelab/DIG

A library for graph deep learning research

Language: Python - Size: 264 MB - Last synced at: 12 days ago - Pushed at: 12 months ago - Stars: 1,964 - Forks: 288

RUCAIBox/CRSLab

CRSLab is an open-source toolkit for building Conversational Recommender System (CRS).

Language: Python - Size: 651 KB - Last synced at: 10 days ago - Pushed at: over 1 year ago - Stars: 535 - Forks: 115

Dung2005qk/Project-Hydra-Quantitative-Trading-Lab

An experimental quantitative trading framework featuring a GNN+Transformer for position sizing, a DQN for stop-loss optimization, and a SAC+XGBoost hybrid for entry signals

Language: Python - Size: 377 KB - Last synced at: 15 days ago - Pushed at: 15 days ago - Stars: 0 - Forks: 0

AstraZeneca/awesome-drug-pair-scoring

Readings for "A Unified View of Relational Deep Learning for Drug Pair Scoring." (IJCAI 2022)

Size: 1.47 MB - Last synced at: 10 days ago - Pushed at: almost 3 years ago - Stars: 96 - Forks: 14

florencejt/fusilli

A Python package housing a collection of deep-learning multi-modal data fusion method pipelines! From data loading, to training, to evaluation - fusilli's got you covered 🌸

Language: Python - Size: 987 MB - Last synced at: 11 days ago - Pushed at: 11 days ago - Stars: 186 - Forks: 14

cmavro/awesome-unsupervised-gnns

List of unsupervised (self-supervised) graph neural network (GNN) methods.

Size: 11.7 KB - Last synced at: 10 days ago - Pushed at: over 4 years ago - Stars: 31 - Forks: 0

haofanwang/Awesome-Computer-Vision

Awesome Resources for Advanced Computer Vision Topics

Size: 93.8 KB - Last synced at: 3 days ago - Pushed at: over 2 years ago - Stars: 234 - Forks: 43

huweibo/Awesome-Federated-Learning-on-Graph-and-GNN-papers

Federated learning on graph, especially on graph neural networks (GNNs), knowledge graph, and private GNN.

Size: 33.2 KB - Last synced at: 4 days ago - Pushed at: over 1 year ago - Stars: 342 - Forks: 50

Ramprasad-Group/polygnn

polyGNN is a Python library to automate ML model training for polymer informatics.

Language: Python - Size: 22 MB - Last synced at: 1 day ago - Pushed at: 5 months ago - Stars: 41 - Forks: 9

SAP/packerl

[TMLR 2024] Official implementation for "Learning Sub-Second Routing Optimization in Computer Networks requires Packet-Level Dynamics"

Language: C++ - Size: 440 KB - Last synced at: 4 days ago - Pushed at: 3 months ago - Stars: 3 - Forks: 1

zmyybc/AlphaNet

A Local Frame-based Atomistic Potential

Language: Python - Size: 99.2 MB - Last synced at: 23 days ago - Pushed at: 23 days ago - Stars: 103 - Forks: 22

AstraZeneca/chemicalx

A PyTorch and TorchDrug based deep learning library for drug pair scoring. (KDD 2022)

Language: Python - Size: 20.4 MB - Last synced at: 21 days ago - Pushed at: almost 2 years ago - Stars: 744 - Forks: 93

FanzhenLiu/Awesome-Deep-Community-Detection

Deep and conventional community detection related papers, implementations, datasets, and tools.

Size: 2.04 MB - Last synced at: 13 days ago - Pushed at: over 1 year ago - Stars: 532 - Forks: 95

rainorangelemon/gnn-motion-planning

The official repo for NeurIPS 2021 paper 'Reducing Collision Checking for Sampling-Based Motion Planning Using Graph Neural Networks'

Language: Python - Size: 82.6 MB - Last synced at: 14 days ago - Pushed at: over 2 years ago - Stars: 106 - Forks: 18

PaddlePaddle/PGL

Paddle Graph Learning (PGL) is an efficient and flexible graph learning framework based on PaddlePaddle

Language: Python - Size: 28.3 MB - Last synced at: 21 days ago - Pushed at: over 1 year ago - Stars: 1,583 - Forks: 311

codefuse-ai/GALLa

[ACL 2025] Graph Aligned Large Language Models for Improved Source Code Understanding

Language: Python - Size: 43 KB - Last synced at: 21 days ago - Pushed at: about 2 months ago - Stars: 17 - Forks: 0

azminewasi/Awesome-Graph-Research-ICLR2024

It is a comprehensive resource hub compiling all graph papers accepted at the International Conference on Learning Representations (ICLR) in 2024.

Size: 1.93 MB - Last synced at: 2 days ago - Pushed at: 8 months ago - Stars: 95 - Forks: 6

grimme-lab/confrankplus

ConfRank+: Extending Conformer Ranking to Charged Molecules

Language: Python - Size: 2.46 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 1 - Forks: 0

CompOmics/molcraft

Deep Learning on Molecules.

Language: Python - Size: 426 KB - Last synced at: 3 days ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 0

jwwthu/GNN-Communication-Networks

This is the repository for the collection of Graph-based Deep Learning for Communication Networks.

Size: 447 KB - Last synced at: about 1 month ago - Pushed at: 3 months ago - Stars: 489 - Forks: 75

recursionpharma/gflownet

GFlowNet library specialized for graph & molecular data

Language: Python - Size: 20.5 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 244 - Forks: 51

omron-sinicx/crystalframer

The official code respository for "Rethinking the role of frames for SE(3)-invariant crystal structure modeling" (ICLR 2025)

Language: Python - Size: 9.74 MB - Last synced at: about 1 month ago - Pushed at: 2 months ago - Stars: 7 - Forks: 1

BojarLab/GIFFLAR

Glycan Informed Foundational Framework for Learning Abstract Representations, based on Combinatorial Complexes and Heterogeneous GNNs

Language: HTML - Size: 2.05 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 3 - Forks: 2

benedekrozemberczki/CapsGNN

A PyTorch implementation of "Capsule Graph Neural Network" (ICLR 2019).

Language: Python - Size: 4.66 MB - Last synced at: about 2 months ago - Pushed at: over 2 years ago - Stars: 1,255 - Forks: 199

HFooladi/GNNs-For-Chemists

Implementations of different GNNs from scratch for chemists

Language: Jupyter Notebook - Size: 29.5 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 117 - Forks: 20

FighterLYL/GraphNeuralNetwork

γ€Šζ·±ε…₯ζ΅…ε‡Ίε›Ύη₯žη»η½‘η»œοΌšGNNεŽŸη†θ§£ζžγ€‹ι…ε₯—代码

Language: Jupyter Notebook - Size: 980 KB - Last synced at: about 2 months ago - Pushed at: over 4 years ago - Stars: 1,830 - Forks: 473

lucidrains/egnn-pytorch

Implementation of E(n)-Equivariant Graph Neural Networks, in Pytorch

Language: Python - Size: 813 KB - Last synced at: about 2 months ago - Pushed at: 7 months ago - Stars: 469 - Forks: 81

xiangwang1223/neural_graph_collaborative_filtering

Neural Graph Collaborative Filtering, SIGIR2019

Language: Python - Size: 11.5 MB - Last synced at: about 2 months ago - Pushed at: about 5 years ago - Stars: 827 - Forks: 271

open-prophetdb/biomedgps-data

Biomedical knowledge graph & graph neural network models for drug repurposing.

Language: Jupyter Notebook - Size: 137 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 6 - Forks: 1

Newiz430/Pretext

Resource for "A Survey on Self-Supervised Graph Foundation Models: Knowledge-Based Perspective"

Size: 1.01 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 28 - Forks: 5

lsj2408/Transformer-M

[ICLR 2023] One Transformer Can Understand Both 2D & 3D Molecular Data (official implementation)

Language: Python - Size: 5.45 MB - Last synced at: 2 months ago - Pushed at: over 2 years ago - Stars: 209 - Forks: 26

mickeysjm/TaxoExpan

The source code used for self-supervised taxonomy expansion method TaxoExpan, published in WWW 2020

Language: Python - Size: 2.95 MB - Last synced at: 2 months ago - Pushed at: over 3 years ago - Stars: 76 - Forks: 18

CVI-SZU/ME-GraphAU

[IJCAI 2022] Learning Multi-dimensional Edge Feature-based AU Relation Graph for Facial Action Unit Recognition, Pytorch code

Language: Python - Size: 25.8 MB - Last synced at: 28 days ago - Pushed at: 7 months ago - Stars: 179 - Forks: 38

kaist-silab/awesome-graph-pde

Collection of resources about partial differential equations, graph neural networks, deep learning and dynamical system simulation

Size: 5.86 KB - Last synced at: 18 days ago - Pushed at: almost 3 years ago - Stars: 96 - Forks: 7

Jhy1993/HAN

Heterogeneous Graph Neural Network

Language: Python - Size: 40.3 MB - Last synced at: 3 months ago - Pushed at: about 5 years ago - Stars: 1,131 - Forks: 222

gu-yaowen/GGAP-CPI

Mitigating Activity Cliff-induced Discrepancies in Deep Learning of Compound-Protein Interaction

Language: Python - Size: 479 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 5 - Forks: 0

basiralab/GNNs-in-Network-Neuroscience

A review of papers proposing novel GNN methods with application to brain connectivity published in 2017-2020.

Size: 55.7 KB - Last synced at: 2 months ago - Pushed at: over 2 years ago - Stars: 228 - Forks: 28

YukiZH/SCOIGET

A Tool for Predicting Spatial Tumor Evolution Pattern by Inferring Spatial Copy Number Variation Distributions

Language: Jupyter Notebook - Size: 30.8 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 3 - Forks: 0

zjhthu/OANet

Implementation of ICCV19 Paper "Learning Two-View Correspondences and Geometry Using Order-Aware Network"

Language: Python - Size: 1.32 MB - Last synced at: 3 months ago - Pushed at: over 2 years ago - Stars: 265 - Forks: 47

HYUNJS/SGT

[WACV-2023] Detection Recovery in Online Multi-Object Tracking with Sparse Graph Tracker

Language: Python - Size: 220 KB - Last synced at: 2 months ago - Pushed at: over 2 years ago - Stars: 58 - Forks: 5

ZZy979/pytorch-tutorial

PyTorchη€ΊδΎ‹δ»£η οΌ›ε€ηŽ°GNNζ¨‘εž‹

Language: Python - Size: 349 KB - Last synced at: 3 months ago - Pushed at: over 3 years ago - Stars: 123 - Forks: 20

DiTEC-project/gnn-pressure-estimation

DiTEC research

Language: Python - Size: 1.82 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 12 - Forks: 6

mukhlishga/gnn-powerflow

Graph Neural Network application in predicting AC Power Flow calculation. Developed with Pytorch Geometric framework. My Master Thesis at Eindhoven University of Technology

Language: Jupyter Notebook - Size: 63.2 MB - Last synced at: 3 months ago - Pushed at: about 3 years ago - Stars: 85 - Forks: 18

briangodwinlim/FinSIR

FinSIR: Financial SIR-GCN for Market Aware Stock Recommendation

Language: Python - Size: 16.6 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

Yasir-ali-farrukh/GNN4ID

GNN4ID: A Toolset for Crafting Graph Neural Network-Based NIDS Datasets

Language: Python - Size: 124 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 12 - Forks: 0

Henrium/LESets

A graph neural network for high-entropy alloys.

Language: Jupyter Notebook - Size: 2.07 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 5 - Forks: 1

cgao-comp/S2I

Language: Python - Size: 0 Bytes - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

ZJUFanLab/scDeepSort

Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network

Language: Python - Size: 19.4 MB - Last synced at: about 8 hours ago - Pushed at: about 2 years ago - Stars: 103 - Forks: 20

PeiJieSun/diffnet

Graph Neural Network based Social Recommendation Model. SIGIR2019.

Language: Python - Size: 58.2 MB - Last synced at: 3 months ago - Pushed at: about 1 year ago - Stars: 177 - Forks: 45

taishan1994/pytorch_HAN

εΌ‚ζž„ε›Ύη₯žη»η½‘η»œHAN。Heterogeneous Graph Attention Network (HAN) with pytorch

Language: Python - Size: 75.2 KB - Last synced at: 3 months ago - Pushed at: over 2 years ago - Stars: 110 - Forks: 12

TrafficGCN/ST-GCN

Repository for advanced traffic forecasting models integrating GCN, LSTM/Bi-LSTM, and attention mechanisms for improved accuracy, including weather data processing.

Language: Python - Size: 956 MB - Last synced at: 3 months ago - Pushed at: 11 months ago - Stars: 16 - Forks: 3

Emory-Melody/GraphSlim

A Python library for graph reduction including condensation, coarsening, and sparsification.

Language: Python - Size: 10.4 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 18 - Forks: 3

thiviyanT/torch-rgcn

A PyTorch implementation of the Relational Graph Convolutional Network (RGCN).

Language: Python - Size: 14 MB - Last synced at: 3 months ago - Pushed at: almost 4 years ago - Stars: 123 - Forks: 16

benedekrozemberczki/MUSAE

The reference implementation of "Multi-scale Attributed Node Embedding". (Journal of Complex Networks 2021)

Language: Python - Size: 19.4 MB - Last synced at: 3 months ago - Pushed at: almost 3 years ago - Stars: 168 - Forks: 21

abpaudel/floorplan-graph

Room Classification on Floor Plan Graphs using Graph Neural Networks

Language: Python - Size: 38.1 KB - Last synced at: 3 months ago - Pushed at: almost 4 years ago - Stars: 18 - Forks: 5

benedekrozemberczki/role2vec

A scalable Gensim implementation of "Learning Role-based Graph Embeddings" (IJCAI 2018).

Language: Python - Size: 7.36 MB - Last synced at: 6 days ago - Pushed at: over 2 years ago - Stars: 167 - Forks: 32

benedekrozemberczki/SEAL-CI

A PyTorch implementation of "Semi-Supervised Graph Classification: A Hierarchical Graph Perspective" (WWW 2019)

Language: Python - Size: 5.08 MB - Last synced at: 2 months ago - Pushed at: over 2 years ago - Stars: 211 - Forks: 43

benedekrozemberczki/Splitter

A Pytorch implementation of "Splitter: Learning Node Representations that Capture Multiple Social Contexts" (WWW 2019).

Language: Python - Size: 11.4 MB - Last synced at: 2 months ago - Pushed at: about 2 years ago - Stars: 213 - Forks: 44

benedekrozemberczki/APPNP

A PyTorch implementation of "Predict then Propagate: Graph Neural Networks meet Personalized PageRank" (ICLR 2019).

Language: Python - Size: 1.2 MB - Last synced at: about 2 months ago - Pushed at: over 2 years ago - Stars: 368 - Forks: 51

jElhamm/Hands-On-Graph-Neural-Networks-Using-Python

"This repository contains the implementation code for the book, which serves as a practical guide to understanding and applying Graph Neural Networks (GNNs) using Python."

Language: Jupyter Notebook - Size: 3.08 MB - Last synced at: 3 months ago - Pushed at: 10 months ago - Stars: 1 - Forks: 0

TiffanyKousiman/graph-attention-neural-network-for-twitter-topic-modelling

Examining Graph Attention Neural Network for Short-Text Topic Modelling using Document Neighbourhood Affinity: A Hydrogen Energy Discourse on Twitter

Language: Jupyter Notebook - Size: 173 MB - Last synced at: about 1 month ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

Jhy1993/Representation-Learning-on-Heterogeneous-Graph

Representation-Learning-on-Heterogeneous-Graph

Size: 34.1 MB - Last synced at: 2 months ago - Pushed at: over 5 years ago - Stars: 440 - Forks: 84

FilippoMB/Total-variation-graph-neural-networks

Pytorch and Tensorflow implementation of TVGNN, presented at ICML 2023.

Language: Python - Size: 1.49 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 20 - Forks: 3

yangysc/ResiNet

Official PyTorch implementation of "Edge Rewiring Goes Neural: Boosting Network Resilience via Policy Gradient".

Language: Python - Size: 14.5 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 8 - Forks: 0

open-prophetdb/biomedgps

A knowledge graph system with graph neural network for drug repurposing and disease mechanism.

Language: Rust - Size: 22.3 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 17 - Forks: 2

omron-sinicx/crystalformer

The official code respository for "Crystalformer: Infinitely Connected Attention for Periodic Structure Encoding" (ICLR 2024)

Language: Python - Size: 3.15 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 14 - Forks: 0

AmitRoy7781/SST-GNN

[PAKDD 2021] SST-GNN: Simplified Spatio-temporal Traffic forecasting model using Graph Neural Network

Language: Jupyter Notebook - Size: 23.5 MB - Last synced at: 4 months ago - Pushed at: 10 months ago - Stars: 37 - Forks: 11

jw9730/random-walk

[ICLR'25 Spotlight] Revisiting Random Walks for Learning on Graphs, in PyTorch

Language: Python - Size: 1.11 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 9 - Forks: 2

jhljx/CTGCN

CTGCN: k-core based Temporal Graph Convolutional Network for Dynamic Graphs (accepted by IEEE TKDE in 2020) https://ieeexplore.ieee.org/document/9240056

Language: Python - Size: 25.1 MB - Last synced at: 21 days ago - Pushed at: about 2 years ago - Stars: 96 - Forks: 28

XYGaoG/SNS

CIKM'23 paper: Semantic-aware Node Synthesis for Imbalanced Heterogeneous Information Networks

Language: Python - Size: 788 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 6 - Forks: 2

yuweihao/KERN

Code for Knowledge-Embedded Routing Network for Scene Graph Generation (CVPR 2019)

Language: Python - Size: 1.22 MB - Last synced at: 3 months ago - Pushed at: almost 3 years ago - Stars: 122 - Forks: 34

benedekrozemberczki/datasets

A repository of pretty cool datasets that I collected for network science and machine learning research.

Size: 91.4 MB - Last synced at: 4 months ago - Pushed at: over 1 year ago - Stars: 623 - Forks: 84

Wuyxin/ReFine

Official code of "Towards Multi-Grained Explainability for Graph Neural Networks" (NeurIPS 2021) + Pytorch Implementation of recent attribution methods for GNNs

Language: Jupyter Notebook - Size: 6.38 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 68 - Forks: 8

benedekrozemberczki/TENE

A sparsity aware implementation of "Enhanced Network Embedding with Text Information" (ICPR 2018).

Language: Python - Size: 1.93 MB - Last synced at: 3 months ago - Pushed at: almost 3 years ago - Stars: 74 - Forks: 17

Xtra-Computing/G3

G3: A Programmable GNN Training System on GPU

Language: Cuda - Size: 10.9 MB - Last synced at: 3 months ago - Pushed at: almost 5 years ago - Stars: 43 - Forks: 8

ZJUFanLab/scDeepSort_performance_comparison

The source code and results for different methods on annotating external testing datsets of human and mouse.

Language: R - Size: 6.33 MB - Last synced at: about 8 hours ago - Pushed at: about 4 years ago - Stars: 12 - Forks: 0

marco-hoffmann/GRAPPA

A GNN model for the prediction of pure component vapor pressures.

Language: Python - Size: 262 KB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 3 - Forks: 0

gzcsudo/Awesome-Hypergraph-Network

A curated list of Hypergraph Learning, Hypergraph Theory, Hypergraph Dataset and Hypergraph Tool.

Size: 1.05 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 226 - Forks: 23

aws-samples/sagemaker-documentdb-train-gnn-for-millions-proteins

Training graph neural nets for millions of proteins on Amazon SageMaker and DocumentDB.

Language: Jupyter Notebook - Size: 354 KB - Last synced at: about 1 month ago - Pushed at: 3 months ago - Stars: 5 - Forks: 2

TrafficGCN/40_cities_osmnx_adjacency_matrices_for_graph_convolutional_networks

Dijkstra adjacency distance matrices were calculated for 40 cities from traffic sensor locations provide by UTD19 https://utd19.ethz.ch/.

Language: Python - Size: 589 MB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 7 - Forks: 0

wey-gu/nebula-dgl

NebulaGraph DGL(Deep Graph Library) Integration Package. (WIP)

Language: Python - Size: 86.9 KB - Last synced at: 5 days ago - Pushed at: over 1 year ago - Stars: 38 - Forks: 3

dangnh0611/kaggle_leash_belka

11th place solution of NeurIPS 2024 - Predict New Medicines with BELKA competition on Kaggle: https://www.kaggle.com/competitions/leash-BELKA

Language: Jupyter Notebook - Size: 7.69 MB - Last synced at: 3 months ago - Pushed at: about 1 year ago - Stars: 7 - Forks: 2

juexinwang/scGNN

scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks

Language: Python - Size: 68.4 MB - Last synced at: 6 months ago - Pushed at: 12 months ago - Stars: 140 - Forks: 40

geriskenderi/graph-jepa

Official code for the paper Graph-level Representation Learning with Joint-Embedding Predictive Architectures published in Transactions on Machine Learning Research (TMLR)

Language: Python - Size: 149 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 19 - Forks: 4

arnaou/fair_gc

A repository for benchmarking Group-contribution models and Graph Neural Networks

Language: Python - Size: 200 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 1 - Forks: 0

hibayesian/awesome-graph-learning-papers

A curated list of graph learning papers, articles, tutorials, slides and projects

Size: 60.1 MB - Last synced at: about 8 hours ago - Pushed at: almost 5 years ago - Stars: 30 - Forks: 8

Zhuofeng-Li/TEG-Benchmark

[NeurIPS 2024 πŸ”₯] TEG-DB: A Comprehensive Dataset and Benchmark of Textual-Edge Graphs

Language: Python - Size: 1010 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 30 - Forks: 2

Fabrifio/graph-gcc-net

Predicting Global Clustering Coefficient with Graph Neural Network

Language: Jupyter Notebook - Size: 2.28 MB - Last synced at: 3 months ago - Pushed at: 6 months ago - Stars: 4 - Forks: 2

jxh4945777/Social-Knowledge-Graph-Papers

A paper list of research about social knowledge graph

Size: 146 KB - Last synced at: 2 months ago - Pushed at: over 2 years ago - Stars: 63 - Forks: 9

azminewasi/CADGL

Data and code of CADGL: Context-Aware Deep Graph Learning for Predicting Drug-Drug Interactions

Language: Python - Size: 6.46 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0

USC-InfoLab/busyness-graph-neural-network

Busyness Graph Neural Network (BysGNN): A framework for accurate Point-of-Interest visit forecasting using dynamic graphs that capture spatial, temporal, semantic, and taxonomic contexts. Presented at ACM SIGSPATIAL 2023, this repository includes code, baselines, and experiments.

Language: Jupyter Notebook - Size: 85.5 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 1 - Forks: 0

benedekrozemberczki/PDN

The official PyTorch implementation of "Pathfinder Discovery Networks for Neural Message Passing" (WebConf '21)

Language: Python - Size: 4.8 MB - Last synced at: about 1 month ago - Pushed at: over 2 years ago - Stars: 58 - Forks: 11

Related Keywords
graph-neural-network 278 deep-learning 68 gnn 55 machine-learning 54 pytorch 46 graph-neural-networks 40 python 21 gcn 20 knowledge-graph 20 graph 19 graph-embedding 18 network-embedding 16 recommender-system 13 neural-network 13 tensorflow 12 graph-convolutional-networks 12 link-prediction 12 transformer 11 graph-representation-learning 10 node-classification 10 self-supervised-learning 9 deepwalk 9 gnns 9 graph-convolutional-network 9 drug-discovery 9 pytorch-geometric 8 node-embedding 8 artificial-intelligence 8 node2vec 8 graphs 7 computer-vision 7 heterogeneous-graph 7 data-science 7 graph-classification 7 drug-repurposing 7 deep-neural-networks 7 graph-transformer 7 neural-networks 7 reinforcement-learning 6 graph-attention-network 6 protein 6 heterogeneous-network 6 geometric-deep-learning 6 representation-learning 6 graph-algorithms 6 attention 6 attention-mechanism 6 dynamic-graphs 5 neural-architecture-search 5 materials-science 5 network-science 5 traffic-forecasting 5 variational-autoencoder 5 transformers 5 generative-adversarial-network 5 graph-convolution 5 cheminformatics 5 natural-language-processing 5 implicit-factorization 4 polypharmacy 4 heterogeneous-graph-neural-network 4 networkx 4 iclr 4 graph-attention-networks 4 nlp 4 message-passing-neural-network 4 research 4 generative-model 4 materials-informatics 4 bioinformatics 4 machine-learning-algorithms 4 benchmark 4 collaborative-filtering 4 automl 4 recommendation 4 awesome-list 4 community-detection 4 awesome 3 gan 3 traffic-prediction 3 lstm 3 single-cell 3 rdkit 3 quantum-chemistry 3 brain-connectivity 3 torch 3 molecule 3 gat 3 network-representation-learning 3 transformer-architecture 3 graph-network 3 graph-machine-learning 3 fintech 3 recommendation-system 3 graph2vec 3 network-analysis 3 chemistry 3 text-classification 3 molecules 3 drug 3