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GitHub topics: geometric-deep-learning

ainimesh/EQAGNN-PPIS

This is the code repository for the paper E(Q)AGNN-PPIS.

Language: Python - Size: 2.18 GB - Last synced at: about 22 hours ago - Pushed at: about 24 hours ago - Stars: 1 - Forks: 0

patnicolas/geometriclearning

Classes and methods for Geometric Deep Learning to support Substack, LinkedIn newsletters and tutorials

Language: Python - Size: 141 MB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 14 - Forks: 4

PASSIONLab/OpenEquivariance

OpenEquivariance: a fast, open-source GPU JIT kernel generator for the Clebsch-Gordon Tensor Product.

Language: Python - Size: 897 KB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 83 - Forks: 5

awslabs/dgl-lifesci

Python package for graph neural networks in chemistry and biology

Language: Python - Size: 963 KB - Last synced at: 1 day ago - Pushed at: almost 2 years ago - Stars: 770 - Forks: 160

pyg-team/pyg-lib

Low-Level Graph Neural Network Operators for PyG

Language: C++ - Size: 953 KB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 211 - Forks: 52

pyg-team/pytorch_geometric

Graph Neural Network Library for PyTorch

Language: Python - Size: 23.4 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 22,822 - Forks: 3,876

zaixizhang/Awesome-SBDD

Papers about Structure-based Drug Design (SBDD)

Size: 454 KB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 120 - Forks: 10

tgm-team/tgm

Efficient and Modular ML on Temporal Graphs

Language: Python - Size: 1.55 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 24 - Forks: 2

mims-harvard/PDGrapher

Combinatorial prediction of therapeutic perturbations using causally-inspired neural networks

Language: Jupyter Notebook - Size: 59.5 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 28 - Forks: 7

microsoft/cliffordlayers

Language: Python - Size: 1.39 MB - Last synced at: 3 days ago - Pushed at: over 1 year ago - Stars: 163 - Forks: 21

rusty1s/pytorch_cluster

PyTorch Extension Library of Optimized Graph Cluster Algorithms

Language: C++ - Size: 2.62 MB - Last synced at: 4 days ago - Pushed at: 23 days ago - Stars: 890 - Forks: 159

pypose/pypose

A library for differentiable robotics.

Language: Python - Size: 12.1 MB - Last synced at: 7 days ago - Pushed at: 5 months ago - Stars: 1,446 - Forks: 112

vLAR-group/GrowSP

🔥GrowSP in PyTorch (CVPR 2023)

Language: Python - Size: 82.6 MB - Last synced at: 9 days ago - Pushed at: 10 days ago - Stars: 183 - Forks: 17

vLAR-group/OGC

🔥OGC in PyTorch (NeurIPS 2022 & TPAMI 2024)

Language: Python - Size: 106 MB - Last synced at: 9 days ago - Pushed at: 10 days ago - Stars: 105 - Forks: 8

vLAR-group/GrabS

🔥GrabS in PyTorch (ICLR 2025 Spotlight)

Language: Python - Size: 88.1 MB - Last synced at: 9 days ago - Pushed at: 10 days ago - Stars: 15 - Forks: 0

stellargraph/stellargraph

StellarGraph - Machine Learning on Graphs

Language: Python - Size: 92.5 MB - Last synced at: 8 days ago - Pushed at: over 1 year ago - Stars: 3,022 - Forks: 439

QUVA-Lab/escnn

Equivariant Steerable CNNs Library for Pytorch https://quva-lab.github.io/escnn/

Language: Python - Size: 33.2 MB - Last synced at: 10 days ago - Pushed at: 10 months ago - Stars: 460 - Forks: 57

atharvaaalok/geosimilarity

Differentiable curve and surface similarity measures.

Language: Python - Size: 82 KB - Last synced at: 6 days ago - Pushed at: 6 months ago - Stars: 10 - Forks: 2

Mugil-911/Auto-Target-Encoder

🎥 Automate video encoding with this GUI tool that uses machine learning to predict optimal settings for batch processing, enhancing efficiency and quality.

Language: Python - Size: 370 KB - Last synced at: 11 days ago - Pushed at: 12 days ago - Stars: 0 - Forks: 0

a-r-j/graphein

Protein Graph Library

Language: Jupyter Notebook - Size: 86.5 MB - Last synced at: 12 days ago - Pushed at: 12 days ago - Stars: 1,119 - Forks: 137

orlitany/orlitany.github.io

Language: TeX - Size: 68.3 MB - Last synced at: 11 days ago - Pushed at: 12 days ago - Stars: 3 - Forks: 1

Danfoa/symmetric_learning

Torch modules for equivariant/invariant learning using ESCNN

Language: Python - Size: 280 KB - Last synced at: 14 days ago - Pushed at: 14 days ago - Stars: 5 - Forks: 0

alibaba/Curvature-Learning-Framework

Curvlearn, a Tensorflow based non-Euclidean deep learning framework.

Language: Python - Size: 10.8 MB - Last synced at: 11 days ago - Pushed at: over 3 years ago - Stars: 164 - Forks: 33

joshivanhilario/Neura-AI

Discover ultra-fast, intelligent AI chat with our voice-enabled chatbot, powered by AI SDK, Groq AI, and Gemini AI. Ideal for customer support, virtual assistants, and interactive apps, offering seamless, real-time conversations. 🚀

Language: JavaScript - Size: 2.48 MB - Last synced at: 15 days ago - Pushed at: 15 days ago - Stars: 4 - Forks: 1

lab-cosmo/sphericart

Multi-language library for the calculation of spherical harmonics in Cartesian coordinates

Language: C++ - Size: 11.4 MB - Last synced at: 13 days ago - Pushed at: 13 days ago - Stars: 87 - Forks: 16

chaitjo/geometric-rna-design

gRNAde: Geometric Deep Learning for 3D RNA inverse design (ICLR 2025 Spotlight)

Language: Jupyter Notebook - Size: 305 MB - Last synced at: 2 days ago - Pushed at: 6 months ago - Stars: 212 - Forks: 22

EdisonLeeeee/GraphGallery

GraphGallery is a gallery for benchmarking Graph Neural Networks

Language: Python - Size: 9.56 MB - Last synced at: 2 days ago - Pushed at: about 2 years ago - Stars: 468 - Forks: 63

HillaryDanan/relativistic-interpretability

A geometric framework for understanding neural network reasoning through multiple reference frames

Language: Python - Size: 52.7 KB - Last synced at: 23 days ago - Pushed at: 23 days ago - Stars: 0 - Forks: 0

rusty1s/pytorch_spline_conv

Implementation of the Spline-Based Convolution Operator of SplineCNN in PyTorch

Language: C++ - Size: 387 KB - Last synced at: 7 days ago - Pushed at: 23 days ago - Stars: 181 - Forks: 41

microsoft/ptgnn

A PyTorch Graph Neural Network Library

Language: Python - Size: 300 KB - Last synced at: 3 days ago - Pushed at: over 3 years ago - Stars: 375 - Forks: 39

lrnzgiusti/awesome-topological-deep-learning

A curated list of topological deep learning (TDL) resources and links.

Size: 126 KB - Last synced at: 4 days ago - Pushed at: 3 months ago - Stars: 255 - Forks: 20

Sentinal4D/cellshape

3D shape analysis using deep learning

Language: Python - Size: 5.5 MB - Last synced at: 10 days ago - Pushed at: almost 2 years ago - Stars: 26 - Forks: 6

LPDI-EPFL/masif-neosurf

MaSIF-neosurf: surface-based protein design for ternary complexes.

Language: Python - Size: 17.6 MB - Last synced at: 24 days ago - Pushed at: 24 days ago - Stars: 139 - Forks: 19

rusty1s/deep-graph-matching-consensus

Implementation of "Deep Graph Matching Consensus" in PyTorch

Language: Python - Size: 3.5 MB - Last synced at: 26 days ago - Pushed at: almost 4 years ago - Stars: 269 - Forks: 49

kirilllzaitsev/layout_aware_monodepth

(Self-) Supervised monocular depth estimation with geometrical regularization based on lines

Language: Python - Size: 3.74 MB - Last synced at: 29 days ago - Pushed at: 29 days ago - Stars: 0 - Forks: 0

tomek1911/GEPAR3D

Code repository for the 2025 MICCAI Paper "GEPAR3D: Geometry Prior-Assisted Learning for 3D Tooth Segmentation"

Language: Python - Size: 112 KB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 2 - Forks: 0

dianamindroc/smlm

Towards enhanced particle averaging for single-molecule localization microscopy using geometric deep learning

Language: Jupyter Notebook - Size: 1020 KB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 2 - Forks: 0

PKU-DAIR/SGL

A scalable graph learning toolkit for extremely large graph datasets. (WWW'22, 🏆 Best Student Paper Award)

Language: Python - Size: 4.08 MB - Last synced at: 17 days ago - Pushed at: over 1 year ago - Stars: 155 - Forks: 23

quiver-team/torch-quiver

PyTorch Library for Low-Latency, High-Throughput Graph Learning on GPUs.

Language: Python - Size: 4.95 MB - Last synced at: 25 days ago - Pushed at: about 2 years ago - Stars: 301 - Forks: 37

arnab39/equiadapt

Library to make any existing neural network architecture equivariant

Language: Jupyter Notebook - Size: 78.8 MB - Last synced at: 14 days ago - Pushed at: 10 months ago - Stars: 54 - Forks: 4

AstraZeneca/chemicalx

A PyTorch and TorchDrug based deep learning library for drug pair scoring. (KDD 2022)

Language: Python - Size: 20.4 MB - Last synced at: about 1 month ago - Pushed at: almost 2 years ago - Stars: 747 - Forks: 95

Byeol-Haneul/CosmoTopo

Topological Deep Learning on Cosmological Datasets

Language: Jupyter Notebook - Size: 3.75 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 0

pedrocurvo/HAET

HAET: Hierarchical Attention Erwin Transolver is a hybrid neural architecture that combines physically-aware spatial decomposition with hierarchical attention for efficient and accurate learning on large-scale 3D meshes and point clouds.

Language: Python - Size: 357 MB - Last synced at: 8 days ago - Pushed at: 8 days ago - Stars: 1 - Forks: 0

hanjq17/GeoTDM

[NeurIPS 2024] The implementation for the paper "Geometric Trajectory Diffusion Models".

Language: Python - Size: 38.3 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 30 - Forks: 4

aidos-lab/rings

Relevant Information in Node features and Graph Structure

Language: Python - Size: 489 KB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 3 - Forks: 1

typedb/typedb-ml 📦

TypeDB-ML is the Machine Learning integrations library for TypeDB

Language: Python - Size: 11 MB - Last synced at: 4 days ago - Pushed at: almost 2 years ago - Stars: 551 - Forks: 92

msck2002/Grapher

Powerful open-source tool for graph visualization, data analysis, and real-time plotting. Simplify complex workflows with Grapher! 🌐📊

Size: 2.93 KB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 0 - Forks: 0

adosar/aidsorb

Python package for deep learning on molecular point clouds.

Language: Python - Size: 16.6 MB - Last synced at: 11 days ago - Pushed at: about 2 months ago - Stars: 4 - Forks: 1

lsj2408/Gaunt-Tensor-Product

[ICLR 2024 Spotlight] Official Implementation of "Enabling Efficient Equivariant Operations in the Fourier Basis via Gaunt Tensor Products"

Language: Python - Size: 16.3 MB - Last synced at: 15 days ago - Pushed at: 10 months ago - Stars: 64 - Forks: 4

mims-harvard/SPECTRA

SPECTRA: Spectral framework for evaluation of biomedical AI models

Language: Jupyter Notebook - Size: 70.1 MB - Last synced at: 17 days ago - Pushed at: 6 months ago - Stars: 40 - Forks: 7

mims-harvard/ATOMICA

ATOMICA: Learning Universal Representations of Intermolecular Interactions

Language: Python - Size: 13.9 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 158 - Forks: 21

andreasMazur/geoconv

A Python library for end-to-end learning on surfaces. It implements pre-processing functions that include geodesic algorithms, neural network layers that operate on surfaces, visualization tools and benchmarking functionalities.

Language: Python - Size: 8.86 MB - Last synced at: 28 days ago - Pushed at: 28 days ago - Stars: 34 - Forks: 3

chinmay5/semantically_consistent_graph_generation

Official code for the MICCAI 2025 paper "Semantically Consistent Discrete Diffusion for 3D Biological Graph Generation"

Language: Python - Size: 1.06 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 0 - Forks: 0

shchur/overlapping-community-detection

Implementation of "Overlapping Community Detection with Graph Neural Networks"

Language: Jupyter Notebook - Size: 16.3 MB - Last synced at: 14 days ago - Pushed at: almost 5 years ago - Stars: 168 - Forks: 47

rubenwiersma/hsn

Code for SIGGRAPH paper CNNs on Surfaces using Rotation-Equivariant Features

Language: Python - Size: 1.02 MB - Last synced at: 24 days ago - Pushed at: 7 months ago - Stars: 89 - Forks: 16

qitianwu/DIFFormer

The official implementation for ICLR23 spotlight paper "DIFFormer: Scalable (Graph) Transformers Induced by Energy Constrained Diffusion"

Language: Python - Size: 137 KB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 301 - Forks: 32

Hook12aaa/christopher

Field theory-based semantic system that starts with BGE embeddings and evolves through selective internet data acceptance/rejection using mathematical resonance criteria.

Language: Python - Size: 7.62 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 0 - Forks: 0

LukasZahradnik/PyNeuraLogic

PyNeuraLogic lets you use Python to create Differentiable Logic Programs

Language: Python - Size: 31.9 MB - Last synced at: 19 days ago - Pushed at: 19 days ago - Stars: 294 - Forks: 22

Thinklab-SJTU/awesome-molecular-docking

We would like to maintain a list of resources which aim to solve molecular docking and other closely related tasks.

Size: 86.9 KB - Last synced at: 5 days ago - Pushed at: over 2 years ago - Stars: 102 - Forks: 6

FluxML/GeometricFlux.jl

Geometric Deep Learning for Flux

Language: Julia - Size: 17.6 MB - Last synced at: 5 days ago - Pushed at: almost 2 years ago - Stars: 353 - Forks: 30

alexOarga/haiku-geometric

A collection of graph neural networks implementations in JAX

Language: Python - Size: 324 KB - Last synced at: 10 days ago - Pushed at: almost 2 years ago - Stars: 33 - Forks: 1

Amadeus-System/Amadeus-System

Size: 78.1 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

AlexDuvalinho/geometric-gnns

List of Geometric GNNs for 3D atomic systems

Size: 4.87 MB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 109 - Forks: 6

rubenwiersma/deltaconv

Code for the SIGGRAPH 2022 paper "DeltaConv: Anisotropic Operators for Geometric Deep Learning on Point Clouds."

Language: Jupyter Notebook - Size: 33.4 MB - Last synced at: about 1 month ago - Pushed at: about 2 years ago - Stars: 143 - Forks: 10

lucidrains/VN-transformer

A Transformer made of Rotation-equivariant Attention using Vector Neurons

Language: Python - Size: 392 KB - Last synced at: 20 days ago - Pushed at: about 2 years ago - Stars: 92 - Forks: 4

APJansen/GroCo

Implementation of Group-Convolutions as Keras layers.

Language: Jupyter Notebook - Size: 1.39 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 4 - Forks: 0

lunarlab-gatech/Morphology-Informed-HGNN

[ICRA 2025] We present a Morphology-Informed Heterogeneous Graph Neural Network (MI-HGNN) for learning-based contact perception. The architecture and connectivity of the MI-HGNN are constructed from the robot morphology.

Language: Python - Size: 81.5 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 22 - Forks: 6

brian-hepler-phd/Spherical-CNN

Interactive exploration of equivariant neural networks on homogeneous spaces, with a focus on the sphere S² as SO(3)/SO(2). From Lecture 8 of the Lie groups course with Quantum Formalism

Language: Jupyter Notebook - Size: 733 KB - Last synced at: about 1 month ago - Pushed at: 4 months ago - Stars: 15 - Forks: 2

Graph-COM/HEPT

[ICML 2024 Oral] LSH-Based Efficient Point Transformer (HEPT)

Language: Python - Size: 3.24 MB - Last synced at: about 1 month ago - Pushed at: 7 months ago - Stars: 20 - Forks: 8

lightaime/deep_gcns

Tensorflow Repo for "DeepGCNs: Can GCNs Go as Deep as CNNs?" ICCV2019 Oral https://www.deepgcns.org

Language: Python - Size: 219 MB - Last synced at: 3 months ago - Pushed at: over 5 years ago - Stars: 630 - Forks: 87

aidos-lab/neural-k-forms

Simplicial Representation Learning with Neural k-Forms

Language: Jupyter Notebook - Size: 323 MB - Last synced at: about 2 months ago - Pushed at: over 1 year ago - Stars: 12 - Forks: 5

andreagemelli/doc2graph

Doc2Graph transforms documents into graphs and exploit a GNN to solve several tasks.

Language: Jupyter Notebook - Size: 466 MB - Last synced at: 3 months ago - Pushed at: over 2 years ago - Stars: 121 - Forks: 20

lightaime/deep_gcns_torch

Pytorch Repo for DeepGCNs (ICCV'2019 Oral, TPAMI'2021), DeeperGCN (arXiv'2020) and GNN1000(ICML'2021): https://www.deepgcns.org

Language: Python - Size: 7.02 MB - Last synced at: 3 months ago - Pushed at: about 3 years ago - Stars: 1,159 - Forks: 156

lfkrapp/kitchenware

A Python toolkit for processing and analyzing molecular structures, optimized for deep learning applications in structural biology.

Language: Python - Size: 79.1 KB - Last synced at: 13 days ago - Pushed at: 4 months ago - Stars: 3 - Forks: 1

chaitjo/geometric-gnn-dojo

Geometric GNN Dojo provides unified implementations and experiments to explore the design space of Geometric Graph Neural Networks (ICML 2023)

Language: Jupyter Notebook - Size: 4.6 MB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 499 - Forks: 46

gd-vae/gd-vae

Geometric Dynamic Variational Autoencoders (GD-VAEs) for learning embedding maps for nonlinear dynamics into general latent spaces. This includes methods for standard latent spaces or manifold latent spaces with specified geometry and topology. The manifold latent spaces can be based on analytic expressions or general point cloud representations.

Language: TeX - Size: 29.7 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 29 - Forks: 1

BioinfoMachineLearning/DeepInteract

A geometric deep learning framework (Geometric Transformers) for predicting protein interface contacts. (ICLR 2022)

Language: Python - Size: 3 MB - Last synced at: 18 days ago - Pushed at: about 3 years ago - Stars: 64 - Forks: 11

LBM-EPFL/PeSTo

Geometric deep learning method to predict protein binding interfaces from a protein structure.

Language: Jupyter Notebook - Size: 378 MB - Last synced at: 4 months ago - Pushed at: almost 2 years ago - Stars: 131 - Forks: 20

rusty1s/himp-gnn

Hierarchical Inter-Message Passing for Learning on Molecular Graphs

Language: Python - Size: 163 KB - Last synced at: 4 months ago - Pushed at: over 3 years ago - Stars: 79 - Forks: 6

zetayue/MXMNet

Source code for "Molecular Mechanics-Driven Graph Neural Network with Multiplex Graph for Molecular Structures"

Language: Python - Size: 48.2 MB - Last synced at: about 2 months ago - Pushed at: almost 2 years ago - Stars: 73 - Forks: 16

atomicarchitects/equiformer

[ICLR 2023 Spotlight] Equiformer: Equivariant Graph Attention Transformer for 3D Atomistic Graphs

Language: Python - Size: 3.95 MB - Last synced at: 4 months ago - Pushed at: 7 months ago - Stars: 233 - Forks: 44

MinkaiXu/EGNO

ICML2024: Equivariant Graph Neural Operator for Modeling 3D Dynamics

Language: Python - Size: 10.3 MB - Last synced at: about 2 months ago - Pushed at: over 1 year ago - Stars: 56 - Forks: 11

lunarlab-gatech/MorphSym-HGNN

[L4DC 2025] Morphological-Symmetry-Equvariant Heterogeneous Graph Neural Network for Robotic Dynamics Learning

Language: Python - Size: 96.6 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 8 - Forks: 1

basiralab/GNNs-in-Network-Neuroscience

A review of papers proposing novel GNN methods with application to brain connectivity published in 2017-2020.

Size: 55.7 KB - Last synced at: 4 months ago - Pushed at: over 2 years ago - Stars: 228 - Forks: 28

AspirinCode/Dynamics-PLI Fork of lmqfly/Dynamics-PLI

Molecular dynamics-powered hierarchical geometric deep learning framework for protein-ligand interaction

Language: Python - Size: 18.8 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

zaixizhang/PocketGen

PocketGen (Nature Machine Intelligence 24): Generating Full-Atom Ligand-Binding Protein Pockets

Language: Python - Size: 15.8 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 176 - Forks: 18

MinkaiXu/GeoLDM

Geometric Latent Diffusion Models for 3D Molecule Generation

Language: Python - Size: 22.7 MB - Last synced at: 5 months ago - Pushed at: about 2 years ago - Stars: 244 - Forks: 45

mengliu1998/DeeperGNN

Official PyTorch implementation of "Towards Deeper Graph Neural Networks" [KDD2020]

Language: Python - Size: 72.3 KB - Last synced at: 4 months ago - Pushed at: almost 3 years ago - Stars: 155 - Forks: 32

KleinYuan/RGGNet

[RA-L 2020] Official Tensorflow Implementation for "RGGNet: Tolerance Aware LiDAR-Camera Online Calibration with Geometric Deep Learning and Generative Model", IEEE Robotics and Automation Letters 5.4 (2020): 6956-6963

Language: Python - Size: 867 KB - Last synced at: 4 months ago - Pushed at: about 1 year ago - Stars: 58 - Forks: 7

vijaydwivedi75/gnn-lspe

Source code for GNN-LSPE (Graph Neural Networks with Learnable Structural and Positional Representations), ICLR 2022

Language: Python - Size: 267 KB - Last synced at: 5 months ago - Pushed at: over 3 years ago - Stars: 253 - Forks: 36

cwangrun/BowelNet

[TMI 2022] BowelNet: Joint Semantic-Geometric Ensemble Learning for Bowel Segmentation from Both Partially and Fully Labeled CT Images

Language: Python - Size: 3.75 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 15 - Forks: 2

martinjolif/MVA

Assignments and Projects from the Master 2 MVA at ENS Paris-Saclay

Language: Jupyter Notebook - Size: 262 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

kmario23/deep-learning-drizzle

Drench yourself in Deep Learning, Reinforcement Learning, Machine Learning, Computer Vision, and NLP by learning from these exciting lectures!!

Language: HTML - Size: 261 KB - Last synced at: 5 months ago - Pushed at: 11 months ago - Stars: 12,525 - Forks: 2,950

mims-harvard/TxGNN

TxGNN: Zero-shot prediction of therapeutic use with geometric deep learning and clinician centered design

Language: Jupyter Notebook - Size: 7.68 MB - Last synced at: 5 months ago - Pushed at: over 1 year ago - Stars: 183 - Forks: 39

Yochengliu/Relation-Shape-CNN

Relation-Shape Convolutional Neural Network for Point Cloud Analysis (CVPR 2019 Oral & Best paper finalist)

Language: Python - Size: 18.7 MB - Last synced at: 3 months ago - Pushed at: almost 4 years ago - Stars: 420 - Forks: 72

VicFisher/DiffPhore

Knowledge-Guided Diffusion Model for 3D Ligand-Pharmacophore Mapping

Language: Python - Size: 13.8 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 23 - Forks: 4

timkartar/DeepPBS

Geometric deep learning of protein–DNA binding specificity

Language: Python - Size: 245 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 64 - Forks: 6

atomicarchitects/equiformer_v2

[ICLR 2024] EquiformerV2: Improved Equivariant Transformer for Scaling to Higher-Degree Representations

Language: Python - Size: 7.64 MB - Last synced at: 5 months ago - Pushed at: 7 months ago - Stars: 254 - Forks: 35

bentherien/parametricScatteringNetworks

[Oral; CVPR'22] Parametric Scattering Networks

Language: Python - Size: 3.74 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 24 - Forks: 5

kaftanski/fissure-segmentation

Keypoint-based Lung Fissure Segmentation with Geometric Deep Learning

Language: Python - Size: 1.9 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 1 - Forks: 1

Related Keywords
geometric-deep-learning 257 graph-neural-networks 82 deep-learning 80 pytorch 62 machine-learning 42 gnn 16 graph-convolutional-networks 16 drug-discovery 16 python 15 pytorch-geometric 13 equivariance 13 graph 12 convolutional-neural-networks 9 protein-structure 8 bioinformatics 8 gcn 8 computer-vision 8 artificial-intelligence 8 molecular-dynamics 8 graphs 8 neural-networks 7 brain-connectivity 7 point-cloud 7 representation-learning 7 3d-point-clouds 7 reinforcement-learning 7 computational-chemistry 6 equivariant-networks 6 graph-neural-network 6 network-neuroscience 6 transformer 5 gnns 5 equivariant-neural-networks 5 graph-learning 5 predictive-intelligence 5 symmetry 5 transformers 5 tensorflow 5 group-theory 5 diffusion-models 5 deep-neural-networks 5 neural-network 5 topological-data-analysis 5 geometry 5 e3nn 5 link-prediction 5 networks 4 invariance 4 unsupervised-learning 4 topological-deep-learning 4 interpretability 4 equivariant-network 4 graphneuralnetwork 4 proteins 4 lie-groups 4 predictive-learning 4 optimal-transport 4 geometry-processing 4 brain-graphs 4 brain-networks 4 knowledge-graph 4 ai 4 autonomous-driving 4 jax 4 node-classification 4 network-analysis 4 protein-design 4 segmentation 4 3d-deep-learning 4 protein-ligand-interactions 4 3d 4 drug-design 4 gan 3 computational-biology 3 graph-theory 3 variational-autoencoder 3 multimodal-deep-learning 3 generative-adversarial-network 3 graph-embedding 3 visualization 3 graph-representation-learning 3 attention 3 torch 3 image-classification 3 medical-image-processing 3 neural-architecture-search 3 deeplearning 3 nlp 3 molecular-surface 3 topology 3 dataset 3 molecular-modeling 3 graph-prediction 3 graph-integration 3 graph-fusion 3 data-science 3 computer-graphics 3 omics 3 machine-learning-algorithms 3 therapeutics 3