GitHub topics: higlass
higlass/higlass
Fast, flexible and extensible genome browser.
Language: JavaScript - Size: 154 MB - Last synced at: 2 days ago - Pushed at: 16 days ago - Stars: 323 - Forks: 52
gosling-lang/gosling.js
Grammar of Scalable Linked Interactive Nucleotide Graphics
Language: TypeScript - Size: 105 MB - Last synced at: 2 days ago - Pushed at: 16 days ago - Stars: 176 - Forks: 30
higlass/clodius
Clodius is a tool for breaking up large data sets into smaller tiles that can subsequently be displayed using an appropriate viewer.
Language: Python - Size: 26.9 MB - Last synced at: 14 days ago - Pushed at: 14 days ago - Stars: 39 - Forks: 21
gosling-lang/gos
A declarative interactive genomics visualization library for Python.
Language: Python - Size: 13 MB - Last synced at: 5 days ago - Pushed at: 8 days ago - Stars: 225 - Forks: 14
flekschas/higlass-labeled-annotation
Labeled Annotation Track for HiGlass
Language: JavaScript - Size: 1.23 MB - Last synced at: 21 days ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 0
higlass/higlass-manage
A utility script to manage local docker instances of HiGlass
Language: Python - Size: 153 KB - Last synced at: about 1 month ago - Pushed at: almost 2 years ago - Stars: 24 - Forks: 9
higlass/higlass-multivec
Multivec Tracks for Higlass
Language: HTML - Size: 3.3 MB - Last synced at: 24 days ago - Pushed at: 10 months ago - Stars: 7 - Forks: 6
higlass/higlass-docker
Builds a docker container wrapping higlass-server and higlass-client in nginx
Language: Shell - Size: 5.66 MB - Last synced at: about 1 month ago - Pushed at: almost 3 years ago - Stars: 32 - Forks: 14
higlass/higlass-server
Server component for HiGlass that manages and serves tiled data
Language: Python - Size: 125 MB - Last synced at: about 1 month ago - Pushed at: almost 2 years ago - Stars: 19 - Forks: 21
hms-dbmi/cistrome-higlass-demo
HiGlass demo with Cistrome data sets.
Language: HTML - Size: 10.7 KB - Last synced at: about 1 year ago - Pushed at: over 5 years ago - Stars: 1 - Forks: 0
hms-dbmi/hic-data-analysis-bootcamp
Workshop on measuring, analyzing, and visualizing the 3D genome with Hi-C data.
Language: Jupyter Notebook - Size: 291 MB - Last synced at: about 1 year ago - Pushed at: almost 7 years ago - Stars: 185 - Forks: 46
hms-dbmi/3d-genome-processing-tutorial
A 3D genome data processing tutorial for ISMB/ECCB 2017
Language: Jupyter Notebook - Size: 188 MB - Last synced at: about 1 year ago - Pushed at: almost 8 years ago - Stars: 48 - Forks: 9
hms-dbmi/cistrome-explorer
Interactive visual analytic tool for exploring epigenomics data w/ associated metadata, powered by HiGlass and Gosling
Language: Jupyter Notebook - Size: 44.1 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 13 - Forks: 0
robomics/generate_higlass_gene_track
Nextflow workflow to generate gene track files for HiGlass
Language: Nextflow - Size: 30.3 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
flekschas/higlass-scalable-insets
Scalable Insets for HiGlass: a new technique for interactively exploring and navigating large numbers of annotated patterns in multiscale visual spaces such as gigapixel images, matrices, or maps.
Language: Jupyter Notebook - Size: 31.8 MB - Last synced at: 4 days ago - Pushed at: over 2 years ago - Stars: 16 - Forks: 1
higlass/higlass-arcs
HiGlass track for displaying arcs between disconnected regions
Language: JavaScript - Size: 2.78 MB - Last synced at: 2 days ago - Pushed at: over 2 years ago - Stars: 9 - Forks: 0
flekschas/higlass-fancy
A collection of fancy HiGlass view configs
Size: 1.37 MB - Last synced at: 3 months ago - Pushed at: over 5 years ago - Stars: 3 - Forks: 0
higlass/higlass-website 📦
HiGlass Project Website
Language: HTML - Size: 12.7 MB - Last synced at: about 1 year ago - Pushed at: about 6 years ago - Stars: 3 - Forks: 4
higlass/range-track
A plugin track for displaying ranges in HiGlass
Language: JavaScript - Size: 3.79 MB - Last synced at: 24 days ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 0
alexpreynolds/hglive
HiGlass-backed dynamic BED gallery browser
Language: JavaScript - Size: 888 KB - Last synced at: about 19 hours ago - Pushed at: over 6 years ago - Stars: 2 - Forks: 0
flekschas/higlass-svelte
Example app how to integrate HiGlass into Svelte
Language: HTML - Size: 4.37 MB - Last synced at: 20 days ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0
flekschas/higlass-geojson
GeoJSON Track for HiGlass
Language: JavaScript - Size: 1.65 MB - Last synced at: 13 days ago - Pushed at: almost 2 years ago - Stars: 1 - Forks: 1
hms-dbmi/higlass-story
A tool to create scrollytelling-based stories with HiGlass.
Language: JavaScript - Size: 1.64 MB - Last synced at: about 1 year ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 0
refinery-platform/refinery-higlass-docker
"Refinery-ified" flavor of the higlass-docker (https://github.com/hms-dbmi/higlass-docker/) project
Language: Python - Size: 82 KB - Last synced at: about 1 year ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0
