Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub topics: membrane-proteins
ProLint/prolint2
Prolint2 is an optimized tool for analyzing and visualizing lipid-protein interactions from molecular dynamics trajectories.
Language: Python - Size: 25.6 MB - Last synced: 14 days ago - Pushed: 14 days ago - Stars: 7 - Forks: 2
ramirezlab/ramirezlab.github.io
The Website of the Ramiréz Lab
Language: HTML - Size: 297 MB - Last synced: 18 days ago - Pushed: 18 days ago - Stars: 2 - Forks: 1
psipred/mempack
Membrane alpha helix packing and orientation predicrtor
Language: Perl - Size: 30.8 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 1 - Forks: 1
NoxelS/memdof
A Python package designed for analyzing the internal degrees of freedom within molecular structures, focusing particularly on membrane proteins. It conducts statistical analyses, providing deep insights into the dynamics and flexibility of molecular interactions. Ideal for finding the most flexible regions within a protein.
Language: Python - Size: 6.41 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 1 - Forks: 0
ZhenHuangLab/MemXTerminator
A software for membrane analysis and subtraction in cryo-EM.
Language: Jupyter Notebook - Size: 21 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 0 - Forks: 0
Lucy-Forrest-Lab/EncoMPASS_build
Source code for building the EncoMPASS database
Language: Python - Size: 257 KB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 1 - Forks: 0
recombinatrix/UA-memb-tutorial
A gromacs tutorial for creating a gromos54A7 simulation system of a protein in a simple membrane
Language: Shell - Size: 4.59 MB - Last synced: 6 months ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0
Moutoussamy/MembraneDepthMapping
Map the depth on a PDB file
Language: Python - Size: 4.19 MB - Last synced: 8 months ago - Pushed: over 3 years ago - Stars: 2 - Forks: 0
clemlab/IMProve-paper-figures
A statistical model to predict heterologous membrane protein expression in E. coli!
Language: R - Size: 75.1 MB - Last synced: 10 months ago - Pushed: over 4 years ago - Stars: 1 - Forks: 0
psipred/MemSatSVM
Membrane helix prediction with SVMs
Language: Perl - Size: 225 KB - Last synced: about 2 months ago - Pushed: about 1 year ago - Stars: 1 - Forks: 2
ProLint/ProLint
The ProLint Webserver
Language: JavaScript - Size: 37.8 MB - Last synced: about 1 year ago - Pushed: almost 3 years ago - Stars: 2 - Forks: 0
lightdock/membrane_docking
Dataset of the "Integrative Modeling of Membrane-associated Protein Assemblies" manuscript
Language: Shell - Size: 2.51 GB - Last synced: about 1 year ago - Pushed: over 3 years ago - Stars: 2 - Forks: 1
Becksteinlab/BornProfiler
A small Python package to set up electrostatic solvation free energy ("Born energy") calculations of an ion in a membrane protein and calculate the electrostatic free energy with APBS .
Language: Python - Size: 1.09 GB - Last synced: 2 months ago - Pushed: over 2 years ago - Stars: 2 - Forks: 2
UWSEDS-aut17/OPMxplore
uwseds-group-OPMxplore created by GitHub Classroom
Language: Jupyter Notebook - Size: 21.6 MB - Last synced: 24 days ago - Pushed: over 6 years ago - Stars: 0 - Forks: 1
